RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 MSR1P21757 451 aa13.93□□□□□ -0.18
CSNK1D-212ENST00000580061 IL32P24001 234 aa13.93□□□□□ -0.18
CSNK1D-212ENST00000580061 GSTT1P30711 240 aa13.93□□□□□ -0.18
CSNK1D-212ENST00000580061 HTR1FP30939 366 aa13.93□□□□□ -0.18
CSNK1D-212ENST00000580061 CCKARP32238 428 aa13.93□□□□□ -0.18
CSNK1D-212ENST00000580061 UGT2B10P36537 528 aa13.93□□□□□ -0.18
CSNK1D-212ENST00000580061 TEKQ02763 1124 aa13.93□□□□□ -0.18
CSNK1D-212ENST00000580061 CDK5R2Q13319 367 aa13.93□□□□□ -0.18
CSNK1D-212ENST00000580061 SGCAQ16586 387 aa13.93□□□□□ -0.18
CSNK1D-212ENST00000580061 TBRG1Q3YBR2 411 aa13.93□□□□□ -0.18
CSNK1D-212ENST00000580061 HIKESHIQ53FT3 197 aa13.93□□□□□ -0.18
CSNK1D-212ENST00000580061 LCN1P1Q5VSP4 162 aa13.93□□□□□ -0.18
CSNK1D-212ENST00000580061 FAM27BQ5VT28 67 aa13.93□□□□□ -0.18
CSNK1D-212ENST00000580061 UGT2A3Q6UWM9 527 aa13.93□□□□□ -0.18
CSNK1D-212ENST00000580061 B3GLCTQ6Y288 498 aa13.93□□□□□ -0.18
CSNK1D-212ENST00000580061 C17orf78Q8N4C9 275 aa13.93□□□□□ -0.18
CSNK1D-212ENST00000580061 ZNF511Q8NB15 262 aa13.93□□□□□ -0.18
CSNK1D-212ENST00000580061 STEAP2Q8NFT2 490 aa13.93□□□□□ -0.18
CSNK1D-212ENST00000580061 ZMYND19Q96E35 227 aaPredicted RBP13.93□□□□□ -0.18
CSNK1D-212ENST00000580061 CNBD2Q96M20 576 aa13.93□□□□□ -0.18
CSNK1D-212ENST00000580061 OR10A4Q9H209 315 aa13.93□□□□□ -0.18
CSNK1D-212ENST00000580061 Q9H521 79 aa13.93□□□□□ -0.18
CSNK1D-212ENST00000580061 WARS2Q9UGM6 360 aaKnown RBP13.93□□□□□ -0.18
CSNK1D-212ENST00000580061 TVP23AA6NH52 213 aa13.92□□□□□ -0.18
CSNK1D-212ENST00000580061 OR5H1A6NKK0 313 aa13.92□□□□□ -0.18
CSNK1D-212ENST00000580061 FARS2O95363 451 aaKnown RBP13.92□□□□□ -0.18
CSNK1D-212ENST00000580061 HRGP04196 525 aa13.92□□□□□ -0.18
CSNK1D-212ENST00000580061 HOXB1P14653 301 aaPredicted RBP13.92□□□□□ -0.18
CSNK1D-212ENST00000580061 LSM6P62312 80 aaKnown RBP13.92□□□□□ -0.18
CSNK1D-212ENST00000580061 TMED1Q13445 227 aa13.92□□□□□ -0.18
CSNK1D-212ENST00000580061 GGTLC2Q14390 218 aa13.92□□□□□ -0.18
CSNK1D-212ENST00000580061 MEP1BQ16820 701 aa13.92□□□□□ -0.18
CSNK1D-212ENST00000580061 OTPQ5XKR4 325 aa13.92□□□□□ -0.18
CSNK1D-212ENST00000580061 LAIR2Q6ISS4 152 aa13.92□□□□□ -0.18
CSNK1D-212ENST00000580061 SKA3Q8IX90 412 aa13.92□□□□□ -0.18
CSNK1D-212ENST00000580061 TIGD4Q8IY51 512 aa13.92□□□□□ -0.18
CSNK1D-212ENST00000580061 LRRC18Q8N456 261 aa13.92□□□□□ -0.18
CSNK1D-212ENST00000580061 SSC4DQ8WTU2 575 aa13.92□□□□□ -0.18
CSNK1D-212ENST00000580061 S100PBPQ96BU1 408 aa13.92□□□□□ -0.18
CSNK1D-212ENST00000580061 SH3GL3Q99963 347 aa13.92□□□□□ -0.18
CSNK1D-212ENST00000580061 USB1Q9BQ65 265 aaKnown RBP13.92□□□□□ -0.18
CSNK1D-212ENST00000580061 ACTR6Q9GZN1 396 aa13.92□□□□□ -0.18
CSNK1D-212ENST00000580061 MARCH7Q9H992 704 aa13.92□□□□□ -0.18
CSNK1D-212ENST00000580061 EMC7Q9NPA0 242 aa13.92□□□□□ -0.18
CSNK1D-212ENST00000580061 SLC17A5Q9NRA2 495 aa13.92□□□□□ -0.18
CSNK1D-212ENST00000580061 HAO2Q9NYQ3 351 aa13.92□□□□□ -0.18
CSNK1D-212ENST00000580061 ZNF224Q9NZL3 707 aa13.92□□□□□ -0.18
CSNK1D-212ENST00000580061 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.92□□□□□ -0.185e-7■■■□□ 17.5
CSNK1D-212ENST00000580061 LRRC42Q9Y546 428 aa13.92□□□□□ -0.18
CSNK1D-212ENST00000580061 COMMD3-BMI1R4GMX3 469 aa13.92□□□□□ -0.18
CSNK1D-212ENST00000580061 SH3D21A4FU49 640 aa13.91□□□□□ -0.18
CSNK1D-212ENST00000580061 SNTNA6NMZ2 147 aa13.91□□□□□ -0.18
CSNK1D-212ENST00000580061 CST2P09228 141 aa13.91□□□□□ -0.18
CSNK1D-212ENST00000580061 ZNF823P16415 610 aa13.91□□□□□ -0.18
CSNK1D-212ENST00000580061 GRNP28799 593 aaKnown RBP13.91□□□□□ -0.18
CSNK1D-212ENST00000580061 NUDT6P53370 316 aa13.91□□□□□ -0.18
CSNK1D-212ENST00000580061 SORDQ00796 357 aa13.91□□□□□ -0.18
CSNK1D-212ENST00000580061 ENDOGQ14249 297 aaKnown RBP13.91□□□□□ -0.18
CSNK1D-212ENST00000580061 SMN1Q16637 294 aaKnown RBP13.91□□□□□ -0.18
CSNK1D-212ENST00000580061 TIMM23BQ5SRD1 257 aa13.91□□□□□ -0.18
CSNK1D-212ENST00000580061 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.91□□□□□ -0.18
CSNK1D-212ENST00000580061 OR10H5Q8NGA6 315 aa13.91□□□□□ -0.18
CSNK1D-212ENST00000580061 ZNF416Q9BWM5 594 aa13.91□□□□□ -0.18
CSNK1D-212ENST00000580061 WDR76Q9H967 626 aa13.91□□□□□ -0.18
CSNK1D-212ENST00000580061 NPDC1Q9NQX5 325 aaPredicted RBP13.91□□□□□ -0.18
CSNK1D-212ENST00000580061 SPTBN1Q01082 2364 aaKnown RBP13.91□□□□□ -0.18
CSNK1D-212ENST00000580061 USP9XQ93008 2570 aaPredicted RBP13.91□□□□□ -0.18
CSNK1D-212ENST00000580061 ADGRG4Q8IZF6 3080 aa13.9□□□□□ -0.18
CSNK1D-212ENST00000580061 ARPC4-TTLL3A0A0A6YYG9 625 aa13.9□□□□□ -0.18
CSNK1D-212ENST00000580061 SELENOFO60613 162 aa13.9□□□□□ -0.18
CSNK1D-212ENST00000580061 DBTP11182 482 aaKnown RBP13.9□□□□□ -0.18
CSNK1D-212ENST00000580061 MTNR1AP48039 350 aa13.9□□□□□ -0.18
CSNK1D-212ENST00000580061 ENTPD1P49961 510 aa13.9□□□□□ -0.18
CSNK1D-212ENST00000580061 ADAM8P78325 824 aa13.9□□□□□ -0.18
CSNK1D-212ENST00000580061 ZNF91Q05481 1191 aa13.9□□□□□ -0.18
CSNK1D-212ENST00000580061 PCK2Q16822 640 aa13.9□□□□□ -0.18
CSNK1D-212ENST00000580061 TEX30Q5JUR7 227 aa13.9□□□□□ -0.18
CSNK1D-212ENST00000580061 SLC16A14Q7RTX9 510 aa13.9□□□□□ -0.18
CSNK1D-212ENST00000580061 P2RY8Q86VZ1 359 aa13.9□□□□□ -0.18
CSNK1D-212ENST00000580061 ERI1Q8IV48 349 aaKnown RBP13.9□□□□□ -0.18
CSNK1D-212ENST00000580061 CCDC36Q8IYA8 594 aa13.9□□□□□ -0.18
CSNK1D-212ENST00000580061 WDR31Q8NA23 367 aa13.9□□□□□ -0.18
CSNK1D-212ENST00000580061 FGFBP3Q8TAT2 258 aa13.9□□□□□ -0.18
CSNK1D-212ENST00000580061 FBXO17Q96EF6 278 aa13.9□□□□□ -0.18
CSNK1D-212ENST00000580061 INTS14Q96SY0 518 aa13.9□□□□□ -0.18
CSNK1D-212ENST00000580061 ADGRL4Q9HBW9 690 aa13.9□□□□□ -0.18
CSNK1D-212ENST00000580061 AMBNQ9NP70 447 aa13.9□□□□□ -0.18
CSNK1D-212ENST00000580061 OBP2BQ9NPH6 170 aa13.9□□□□□ -0.18
CSNK1D-212ENST00000580061 KCNG2Q9UJ96 466 aa13.9□□□□□ -0.18
CSNK1D-212ENST00000580061 PCDHGB5Q9Y5G0 923 aa13.9□□□□□ -0.18
CSNK1D-212ENST00000580061 ZNF503-AS2A6NEH8 195 aa13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 C12orf71A8MTZ7 269 aa13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 UBL3O95164 117 aa13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 HLA-HP01893 362 aa13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 MRPL3P09001 348 aaKnown RBP13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 MMP7P09237 267 aaPredicted RBP13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 SBK2P0C263 348 aa13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 PATE4P0C8F1 98 aa13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 PSKH1P11801 424 aa13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 HOXC12P31275 282 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms