RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 MS4A2Q01362 244 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 TRAP1Q12931 704 aaKnown RBP5.67□□□□□ -1.5
TRAF4-213ENST00000578917 PPP1R8Q12972 351 aaKnown RBP5.67□□□□□ -1.5
TRAF4-213ENST00000578917 TSPAN31Q12999 210 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 KRR1Q13601 381 aaKnown RBP5.67□□□□□ -1.5
TRAF4-213ENST00000578917 FLOT2Q14254 428 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 ADIPOQQ15848 244 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 MOGQ16653 247 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 PABPC1L2AQ5JQF8 200 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 CLEC12AQ5QGZ9 265 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 SLC35F1Q5T1Q4 408 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 C10orf128Q5T292 105 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 FAM27BQ5VT28 67 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 OR2T5Q6IEZ7 315 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 LCN8Q6JVE9 175 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 DNM1P34Q6PK57 102 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 SLC25A47Q6Q0C1 308 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 ZER1Q7Z7L7 766 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 ADCK1Q86TW2 530 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 MYPOPQ86VE0 399 aaPredicted RBP5.67□□□□□ -1.5
TRAF4-213ENST00000578917 GLB1L2Q8IW92 636 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 CIARTQ8N365 385 aaPredicted RBP5.67□□□□□ -1.5
TRAF4-213ENST00000578917 OR2T29Q8NH02 315 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 AKR7LQ8NHP1 331 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 FGFBP3Q8TAT2 258 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 ZNF519Q8TB69 540 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 IGFBPL1Q8WX77 278 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 FAM168AQ92567 244 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 RASD2Q96D21 266 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 SAMD8Q96LT4 415 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 FOXN4Q96NZ1 517 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 SMR3AQ99954 134 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 SYT3Q9BQG1 590 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 CHID1Q9BWS9 393 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 CDADC1Q9BWV3 514 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 REG4Q9BYZ8 158 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 SYT4Q9H2B2 425 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 MS4A5Q9H3V2 200 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 GSX1Q9H4S2 264 aaPredicted RBP5.67□□□□□ -1.5
TRAF4-213ENST00000578917 MAGIXQ9H6Y5 334 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 ZNF442Q9H7R0 627 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 YY1AP1Q9H869 796 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 ZNF556Q9HAH1 456 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 EMC7Q9NPA0 242 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 NRIP3Q9NQ35 241 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 FZR1Q9UM11 496 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 POLR1DQ9Y2S0 133 aa5.67□□□□□ -1.5
TRAF4-213ENST00000578917 SAMHD1Q9Y3Z3 626 aaKnown RBP5.67□□□□□ -1.5
TRAF4-213ENST00000578917 PLCE1Q9P212 2302 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 C2CD3Q4AC94 2353 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 DHRS12A0PJE2 317 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 AQP12BA6NM10 295 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 H3BN98 237 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 TPD52L2O43399 206 aaKnown RBP5.66□□□□□ -1.5
TRAF4-213ENST00000578917 SYNGR3O43761 229 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 IDH3BO43837 385 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 ATP5HO75947 161 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 LY6HO94772 140 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 GASTP01350 101 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 SEMG1P04279 462 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 ZNF26P17031 533 aaPredicted RBP5.66□□□□□ -1.5
TRAF4-213ENST00000578917 ZNF32P17041 273 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 GSTM3P21266 225 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 CRABP1P29762 137 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 GCH1P30793 250 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 GLRXP35754 106 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 CDKN2AP42771 156 aaKnown RBP5.66□□□□□ -1.5
TRAF4-213ENST00000578917 LIMS1P48059 325 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 ERFP50548 548 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 HMGA2P52926 109 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 UCP2P55851 309 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 KLF3P57682 345 aaPredicted RBP5.66□□□□□ -1.5
TRAF4-213ENST00000578917 PSG4Q00888 419 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 FHL1Q13642 323 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 EFNB3Q15768 340 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 NKPD1Q17RQ9 610 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 SWI5Q1ZZU3 235 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 MICAQ29983 383 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 MST1LQ2TV78 715 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 IQCCQ4KMZ1 466 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 MESTQ5EB52 335 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 C11orf71Q6IPW1 123 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 RGS7BPQ6MZT1 257 aaPredicted RBP5.66□□□□□ -1.5
TRAF4-213ENST00000578917 RPL13AP3Q6NVV1 102 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 ZNF774Q6NX45 483 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 C1orf94Q6P1W5 598 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 LEG1Q6P5S2 330 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 TMEM154Q6P9G4 183 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 THSD4Q6ZMP0 1018 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 KRTAP1-3Q8IUG1 177 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 AQP12AQ8IXF9 295 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 ZCCHC24Q8N2G6 241 aaKnown RBP5.66□□□□□ -1.5
TRAF4-213ENST00000578917 ZNF525Q8N782 197 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 LRRC75AQ8NAA5 344 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 AQP11Q8NBQ7 271 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 MAPK1IP1LQ8NDC0 245 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 CPEB3Q8NE35 698 aaKnown RBP5.66□□□□□ -1.5
TRAF4-213ENST00000578917 OR10H5Q8NGA6 315 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 OR52E2Q8NGJ4 325 aa5.66□□□□□ -1.5
TRAF4-213ENST00000578917 OR4K13Q8NH42 304 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms