RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 TAS2R8Q9NYW2 309 aa13.16□□□□□ -0.3
SCARF1-209ENST00000576012 PDGFRLQ15198 375 aa13.16□□□□□ -0.3
SCARF1-209ENST00000576012 INPP5JQ15735 1006 aaPredicted RBP13.16□□□□□ -0.3
SCARF1-209ENST00000576012 ZNF585AQ6P3V2 769 aa13.16□□□□□ -0.3
SCARF1-209ENST00000576012 STOML3Q8TAV4 291 aa13.16□□□□□ -0.3
SCARF1-209ENST00000576012 ARL11Q969Q4 196 aa13.16□□□□□ -0.3
SCARF1-209ENST00000576012 SEH1LQ96EE3 360 aa13.16□□□□□ -0.3
SCARF1-209ENST00000576012 LRIT1Q9P2V4 623 aa13.16□□□□□ -0.3
SCARF1-209ENST00000576012 ICAM5Q9UMF0 924 aa13.16□□□□□ -0.3
SCARF1-209ENST00000576012 POM121BA6NF01 834 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 C17orf51A8MQB3 221 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 SULT2B1O00204 365 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 B3GALT2O43825 422 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 CTSVO60911 334 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 SNAPINO95295 136 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 IGKV1D-16P01601 117 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 THBS1P07996 1170 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 SNRNP70P08621 437 aaKnown RBP13.15□□□□□ -0.3
SCARF1-209ENST00000576012 NQO2P16083 231 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 FABP9Q0Z7S8 132 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 SLC9A3R2Q15599 337 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 MEP1BQ16820 701 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 DEFB110Q30KQ9 67 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 MARCH3Q86UD3 253 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 PARGQ86W56 976 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 CCL4L1Q8NHW4 92 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 GPR148Q8TDV2 347 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 RNF166Q96A37 237 aaPredicted RBP13.15□□□□□ -0.3
SCARF1-209ENST00000576012 SPACA7Q96KW9 195 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 NAA11Q9BSU3 229 aaPredicted RBP13.15□□□□□ -0.3
SCARF1-209ENST00000576012 UQCC1Q9NVA1 299 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 UPB1Q9UBR1 384 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 DTX4Q9Y2E6 619 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 CDC40O60508 579 aaKnown RBP eCLIP13.15□□□□□ -0.3
SCARF1-209ENST00000576012 MUC1P15941 1255 aaPredicted RBP13.15□□□□□ -0.3
SCARF1-209ENST00000576012 CPT2P23786 658 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 ACAA2P42765 397 aaKnown RBP13.15□□□□□ -0.3
SCARF1-209ENST00000576012 PPM1FP49593 454 aaPredicted RBP13.15□□□□□ -0.3
SCARF1-209ENST00000576012 PRSS35Q8N3Z0 413 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 CSNK1A1LQ8N752 337 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 SEMA6DQ8NFY4 1073 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 OR5AP2Q8NGF4 316 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 OR4C3Q8NH37 302 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 SP7Q8TDD2 431 aaPredicted RBP13.15□□□□□ -0.3
SCARF1-209ENST00000576012 SUSD6Q92537 303 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 TCEAL3Q969E4 200 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 WDR77Q9BQA1 342 aaPredicted RBP13.15□□□□□ -0.3
SCARF1-209ENST00000576012 UTP23Q9BRU9 249 aaKnown RBP13.15□□□□□ -0.3
SCARF1-209ENST00000576012 LAT2Q9GZY6 243 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 SEMA6CQ9H3T2 930 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 HEATR5AQ86XA9 2040 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 A0A1W2PP55 124 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 OR2F2O95006 317 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 ERCC1P07992 297 aaPredicted RBP13.15□□□□□ -0.3
SCARF1-209ENST00000576012 OR2F1Q13607 317 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 WDR38Q5JTN6 314 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 MRPL48Q96GC5 212 aaKnown RBP13.15□□□□□ -0.3
SCARF1-209ENST00000576012 SMIM3Q9BZL3 60 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 ELOVL3Q9HB03 270 aa13.15□□□□□ -0.3
SCARF1-209ENST00000576012 MSGN1A6NI15 193 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 ADAP1O75689 374 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 FGF18O76093 207 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 GLCEO94923 617 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 AGR2O95994 175 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 CSTAP01040 98 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 ZNF14P17017 642 aaPredicted RBP13.14□□□□□ -0.31
SCARF1-209ENST00000576012 CD1CP29017 333 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 F2RL1P55085 397 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 TAS2R19P59542 299 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 HNRNPA1L2Q32P51 320 aaKnown RBP13.14□□□□□ -0.31
SCARF1-209ENST00000576012 LINC01590Q5TEZ4 76 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 FOXRED1Q96CU9 486 aaPredicted RBP13.14□□□□□ -0.31
SCARF1-209ENST00000576012 TAS2R4Q9NYW5 299 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 SERTAD3Q9UJW9 196 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 DAPP1Q9UN19 280 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 FRMPD3Q5JV73 1810 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 EFEMP2O95967 443 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 ITGB2P05107 769 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 SPARCP09486 303 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 MAPK3P27361 379 aaPredicted RBP13.14□□□□□ -0.31
SCARF1-209ENST00000576012 RORAP35398 523 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 SERPINF1P36955 418 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 RAB5BP61020 215 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 ELAVL3Q14576 367 aaKnown RBP13.14□□□□□ -0.31
SCARF1-209ENST00000576012 EIF2S3LQ2VIR3 472 aaKnown RBP13.14□□□□□ -0.31
SCARF1-209ENST00000576012 ADAM5Q6NVV9 412 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 CLEC9AQ6UXN8 241 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 CDRT4Q8N9R6 151 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 OR13C8Q8NGS7 320 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 SLC25A36Q96CQ1 311 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 RRNAD1Q96FB5 475 aaKnown RBP13.14□□□□□ -0.31
SCARF1-209ENST00000576012 ZNF764Q96H86 408 aaPredicted RBP13.14□□□□□ -0.31
SCARF1-209ENST00000576012 AKR1E2Q96JD6 320 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 CHMP1AQ9HD42 196 aaPredicted RBP13.14□□□□□ -0.31
SCARF1-209ENST00000576012 DZANK1Q9NVP4 752 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 C19orf53Q9UNZ5 99 aaPredicted RBP13.14□□□□□ -0.31
SCARF1-209ENST00000576012 KCNK7Q9Y2U2 307 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 ETV7Q9Y603 341 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 SPAG17Q6Q759 2223 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 LAMA1P25391 3075 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms