RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 CDV3Q9UKY7 258 aaKnown RBP25.9■■□□□ 1.74
CTDNEP1-208ENST00000573600 ZNF891A8MT65 544 aaPredicted RBP25.89■■□□□ 1.74
CTDNEP1-208ENST00000573600 PPP5CP53041 499 aa25.89■■□□□ 1.74
CTDNEP1-208ENST00000573600 SUCLG1P53597 346 aaKnown RBP25.89■■□□□ 1.74
CTDNEP1-208ENST00000573600 OTPQ5XKR4 325 aa25.89■■□□□ 1.74
CTDNEP1-208ENST00000573600 LRRN1Q6UXK5 716 aa25.89■■□□□ 1.74
CTDNEP1-208ENST00000573600 UNQ9370/PRO34162Q6UXP9 181 aa25.89■■□□□ 1.74
CTDNEP1-208ENST00000573600 OR13C5Q8NGS8 318 aa25.89■■□□□ 1.74
CTDNEP1-208ENST00000573600 OR10D3Q8NH80 312 aa25.89■■□□□ 1.74
CTDNEP1-208ENST00000573600 OR5AK2Q8NH90 309 aa25.89■■□□□ 1.74
CTDNEP1-208ENST00000573600 C11orf40Q8WZ69 217 aa25.89■■□□□ 1.74
CTDNEP1-208ENST00000573600 PNPLA2Q96AD5 504 aa25.89■■□□□ 1.74
CTDNEP1-208ENST00000573600 SCMH1Q96GD3 660 aa25.89■■□□□ 1.74
CTDNEP1-208ENST00000573600 CXCL13O43927 109 aa25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 ZFPL1O95159 310 aa25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 RASGEF1BQ0VAM2 473 aa25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 ZNF544Q6NX49 715 aa25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 CCDC190Q86UF4 302 aa25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 TMEM251Q8N6I4 163 aa25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 TMEM178AQ8NBL3 297 aa25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 OR2G2Q8NGZ5 317 aa25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 RNF128Q8TEB7 428 aa25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 CPNE4Q96A23 557 aaPredicted RBP25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 INTS12Q96CB8 462 aaKnown RBP25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 MAP6Q96JE9 813 aa25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 DCBLD2Q96PD2 775 aa25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 GLTPQ9NZD2 209 aa25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 FRRS1LQ9P0K9 344 aa25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 TRAV1-2A0A0B4J238 106 aa25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 A0A1W2PPL8 197 aa25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 RGS5O15539 181 aa25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 ZNF254O75437 659 aa25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 QDPRP09417 244 aa25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 UCHL1P09936 223 aa25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 WT1P19544 449 aaPredicted RBP25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 RFC3P40938 356 aa25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 MAGEA5P43359 124 aa25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 EIF1AXP47813 144 aaKnown RBP25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 CSNK1A1P48729 337 aa25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 RIDAP52758 137 aaKnown RBP25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 CDC20Q12834 499 aa25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 SPANXN2Q5MJ10 180 aa25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 HSD17B8Q92506 261 aa25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 TMEM54Q969K7 222 aa25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 WDFY2Q96P53 400 aa25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 OR2M2Q96R28 347 aa25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 COMMD4Q9H0A8 199 aa25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 PPIL3Q9H2H8 161 aaKnown RBP25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 CMAHPQ9Y471 501 aa25.88■■□□□ 1.73
CTDNEP1-208ENST00000573600 FAM166BA8MTA8 275 aa25.87■■□□□ 1.73
CTDNEP1-208ENST00000573600 ZNF432O94892 652 aa25.87■■□□□ 1.73
CTDNEP1-208ENST00000573600 CCL11P51671 97 aa25.87■■□□□ 1.73
CTDNEP1-208ENST00000573600 ZNF766Q5HY98 468 aa25.87■■□□□ 1.73
CTDNEP1-208ENST00000573600 DEGS2Q6QHC5 323 aa25.87■■□□□ 1.73
CTDNEP1-208ENST00000573600 DCXRQ7Z4W1 244 aa25.87■■□□□ 1.73
CTDNEP1-208ENST00000573600 ZFP62Q8NB50 900 aaPredicted RBP25.87■■□□□ 1.73
CTDNEP1-208ENST00000573600 ZNF385AQ96PM9 386 aaKnown RBP25.87■■□□□ 1.73
CTDNEP1-208ENST00000573600 CNOT1A5YKK6 2376 aaKnown RBP25.87■■□□□ 1.73
CTDNEP1-208ENST00000573600 TMEM212A6NML5 194 aa25.86■■□□□ 1.73
CTDNEP1-208ENST00000573600 CCR9P51686 369 aa25.86■■□□□ 1.73
CTDNEP1-208ENST00000573600 CAV3P56539 151 aa25.86■■□□□ 1.73
CTDNEP1-208ENST00000573600 FAM27D1Q5T7N8 215 aa25.86■■□□□ 1.73
CTDNEP1-208ENST00000573600 SLC22A16Q86VW1 577 aa25.86■■□□□ 1.73
CTDNEP1-208ENST00000573600 OR6N1Q8NGY5 312 aa25.86■■□□□ 1.73
CTDNEP1-208ENST00000573600 ST7LQ8TDW4 575 aa25.86■■□□□ 1.73
CTDNEP1-208ENST00000573600 SMIM30A4D0T7 59 aa25.85■■□□□ 1.73
CTDNEP1-208ENST00000573600 TRABD2BA6NFA1 517 aa25.85■■□□□ 1.73
CTDNEP1-208ENST00000573600 ZNF879B4DU55 563 aa25.85■■□□□ 1.73
CTDNEP1-208ENST00000573600 TNFSF8P32971 234 aa25.85■■□□□ 1.73
CTDNEP1-208ENST00000573600 ZNF133P52736 654 aaPredicted RBP25.85■■□□□ 1.73
CTDNEP1-208ENST00000573600 CLDN15P56746 228 aa25.85■■□□□ 1.73
CTDNEP1-208ENST00000573600 KCNMB1Q16558 191 aa25.85■■□□□ 1.73
CTDNEP1-208ENST00000573600 ABLIM2Q6H8Q1 611 aa25.85■■□□□ 1.73
CTDNEP1-208ENST00000573600 LRFN4Q6PJG9 635 aa25.85■■□□□ 1.73
CTDNEP1-208ENST00000573600 BTLAQ7Z6A9 289 aa25.85■■□□□ 1.73
CTDNEP1-208ENST00000573600 SEC61A2Q9H9S3 476 aa25.85■■□□□ 1.73
CTDNEP1-208ENST00000573600 RIF1Q5UIP0 2472 aaKnown RBP25.85■■□□□ 1.73
CTDNEP1-208ENST00000573600 CNTRLQ7Z7A1 2325 aa25.85■■□□□ 1.73
CTDNEP1-208ENST00000573600 ZFHX2Q9C0A1 2572 aaPredicted RBP25.85■■□□□ 1.73
CTDNEP1-208ENST00000573600 OR4C45A6NMZ5 311 aa25.85■■□□□ 1.73
CTDNEP1-208ENST00000573600 CELA3AP09093 270 aa25.85■■□□□ 1.73
CTDNEP1-208ENST00000573600 PPIAP62937 165 aaKnown RBP25.85■■□□□ 1.73
CTDNEP1-208ENST00000573600 C10orf128Q5T292 105 aa25.85■■□□□ 1.73
CTDNEP1-208ENST00000573600 DDI2Q5TDH0 399 aa25.85■■□□□ 1.73
CTDNEP1-208ENST00000573600 MZT2AQ6P582 158 aa25.85■■□□□ 1.73
CTDNEP1-208ENST00000573600 TMEM123Q8N131 208 aa25.85■■□□□ 1.73
CTDNEP1-208ENST00000573600 ZIC4Q8N9L1 334 aa25.85■■□□□ 1.73
CTDNEP1-208ENST00000573600 C4orf45Q96LM5 186 aa25.85■■□□□ 1.73
CTDNEP1-208ENST00000573600 OR14A2Q96R54 314 aa25.85■■□□□ 1.73
CTDNEP1-208ENST00000573600 SLC30A2Q9BRI3 323 aa25.85■■□□□ 1.73
CTDNEP1-208ENST00000573600 CYB5R1Q9UHQ9 305 aa25.85■■□□□ 1.73
CTDNEP1-208ENST00000573600 LRP12Q9Y561 859 aa25.85■■□□□ 1.73
CTDNEP1-208ENST00000573600 ARPC4-TTLL3A0A0A6YYG9 625 aa25.84■■□□□ 1.73
CTDNEP1-208ENST00000573600 MAPK3P27361 379 aaPredicted RBP25.84■■□□□ 1.73
CTDNEP1-208ENST00000573600 LHX2P50458 406 aa25.84■■□□□ 1.73
CTDNEP1-208ENST00000573600 LINC00346Q8IVM7 164 aa25.84■■□□□ 1.73
CTDNEP1-208ENST00000573600 PARP16Q8N5Y8 322 aa25.84■■□□□ 1.73
CTDNEP1-208ENST00000573600 ACOT12Q8WYK0 555 aa25.84■■□□□ 1.73
CTDNEP1-208ENST00000573600 ATF6BQ99941 703 aa25.84■■□□□ 1.73
CTDNEP1-208ENST00000573600 RCE1Q9Y256 329 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms