RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 ZNF229Q9UJW7 825 aa16.7■□□□□ 0.26
CCDC40-206ENST00000572083 MMP24Q9Y5R2 645 aa16.7■□□□□ 0.26
CCDC40-206ENST00000572083 WNK1Q9H4A3 2382 aa16.69■□□□□ 0.26
CCDC40-206ENST00000572083 F5H0A9 414 aaPredicted RBP16.69■□□□□ 0.26
CCDC40-206ENST00000572083 BLOC1S5-TXNDC5H3BN57 136 aa16.69■□□□□ 0.26
CCDC40-206ENST00000572083 HOXA3O43365 443 aaPredicted RBP16.69■□□□□ 0.26
CCDC40-206ENST00000572083 MGRN1O60291 552 aa16.69■□□□□ 0.26
CCDC40-206ENST00000572083 SNNO75324 88 aaPredicted RBP16.69■□□□□ 0.26
CCDC40-206ENST00000572083 F13BP05160 661 aa16.69■□□□□ 0.26
CCDC40-206ENST00000572083 SLC6A2P23975 617 aa16.69■□□□□ 0.26
CCDC40-206ENST00000572083 CD80P33681 288 aa16.69■□□□□ 0.26
CCDC40-206ENST00000572083 LIPAP38571 399 aa16.69■□□□□ 0.26
CCDC40-206ENST00000572083 GDI2P50395 445 aaKnown RBP16.69■□□□□ 0.26
CCDC40-206ENST00000572083 PPP1CBP62140 327 aa16.69■□□□□ 0.26
CCDC40-206ENST00000572083 BTG1P62324 171 aa16.69■□□□□ 0.26
CCDC40-206ENST00000572083 ERVK-25P63136 954 aa16.69■□□□□ 0.26
CCDC40-206ENST00000572083 NPTX1Q15818 432 aa16.69■□□□□ 0.26
CCDC40-206ENST00000572083 TMEM155Q4W5P6 130 aa16.69■□□□□ 0.26
CCDC40-206ENST00000572083 ESCO2Q56NI9 601 aa16.69■□□□□ 0.26
CCDC40-206ENST00000572083 ZMAT1Q5H9K5 638 aa16.69■□□□□ 0.26
CCDC40-206ENST00000572083 ENTPD8Q5MY95 495 aa16.69■□□□□ 0.26
CCDC40-206ENST00000572083 TTC33Q6PID6 262 aaPredicted RBP16.69■□□□□ 0.26
CCDC40-206ENST00000572083 C17orf107Q6ZR85 190 aa16.69■□□□□ 0.26
CCDC40-206ENST00000572083 NABP1Q96AH0 204 aa16.69■□□□□ 0.26
CCDC40-206ENST00000572083 CCT8L2Q96SF2 557 aa16.69■□□□□ 0.26
CCDC40-206ENST00000572083 PKP2Q99959 881 aa16.69■□□□□ 0.26
CCDC40-206ENST00000572083 MRPL13Q9BYD1 178 aaKnown RBP16.69■□□□□ 0.26
CCDC40-206ENST00000572083 IKZF5Q9H5V7 419 aa16.69■□□□□ 0.26
CCDC40-206ENST00000572083 THAP1Q9NVV9 213 aa16.69■□□□□ 0.26
CCDC40-206ENST00000572083 KLHL21Q9UJP4 597 aa16.69■□□□□ 0.26
CCDC40-206ENST00000572083 TRAV40A0A0B4J280 105 aa16.68■□□□□ 0.26
CCDC40-206ENST00000572083 TIMM8AO60220 97 aaPredicted RBP16.68■□□□□ 0.26
CCDC40-206ENST00000572083 SERPINB7O75635 380 aa16.68■□□□□ 0.26
CCDC40-206ENST00000572083 LYPD3O95274 346 aa16.68■□□□□ 0.26
CCDC40-206ENST00000572083 NGFP01138 241 aa16.68■□□□□ 0.26
CCDC40-206ENST00000572083 OPN1SWP03999 348 aa16.68■□□□□ 0.26
CCDC40-206ENST00000572083 HIST1H2ABP04908 130 aa16.68■□□□□ 0.26
CCDC40-206ENST00000572083 ASAH2BP0C7U1 165 aa16.68■□□□□ 0.26
CCDC40-206ENST00000572083 PAX8Q06710 450 aa16.68■□□□□ 0.26
CCDC40-206ENST00000572083 FMODQ06828 376 aa16.68■□□□□ 0.26
CCDC40-206ENST00000572083 MTX3Q5HYI7 312 aa16.68■□□□□ 0.26
CCDC40-206ENST00000572083 C10orf128Q5T292 105 aa16.68■□□□□ 0.26
CCDC40-206ENST00000572083 LRIF1Q5T3J3 769 aa16.68■□□□□ 0.26
CCDC40-206ENST00000572083 BRICD5Q6PL45 260 aa16.68■□□□□ 0.26
CCDC40-206ENST00000572083 UNQ6126/PRO20091Q6UXV3 157 aa16.68■□□□□ 0.26
CCDC40-206ENST00000572083 C9orf139Q6ZV77 190 aa16.68■□□□□ 0.26
CCDC40-206ENST00000572083 HIST3H2AQ7L7L0 130 aa16.68■□□□□ 0.26
CCDC40-206ENST00000572083 LRRC28Q86X40 367 aaPredicted RBP16.68■□□□□ 0.26
CCDC40-206ENST00000572083 OR6T1Q8NGN1 323 aa16.68■□□□□ 0.26
CCDC40-206ENST00000572083 ASB10Q8WXI3 467 aa16.68■□□□□ 0.26
CCDC40-206ENST00000572083 HIST1H2ACQ93077 130 aa16.68■□□□□ 0.26
CCDC40-206ENST00000572083 SLC19A3Q9BZV2 496 aa16.68■□□□□ 0.26
CCDC40-206ENST00000572083 TMEM38AQ9H6F2 299 aa16.68■□□□□ 0.26
CCDC40-206ENST00000572083 SIAEQ9HAT2 523 aa16.68■□□□□ 0.26
CCDC40-206ENST00000572083 TNFRSF19Q9NS68 423 aa16.68■□□□□ 0.26
CCDC40-206ENST00000572083 VAPAQ9P0L0 249 aa16.68■□□□□ 0.26
CCDC40-206ENST00000572083 SLC7A7Q9UM01 511 aa16.68■□□□□ 0.26
CCDC40-206ENST00000572083 UGT2A1Q9Y4X1 527 aa16.68■□□□□ 0.26
CCDC40-206ENST00000572083 IGKV1D-43A0A0B4J1Z2 117 aa16.67■□□□□ 0.26
CCDC40-206ENST00000572083 A0A1W2PRG6 482 aa16.67■□□□□ 0.26
CCDC40-206ENST00000572083 FAM181BA6NEQ2 426 aa16.67■□□□□ 0.26
CCDC40-206ENST00000572083 FMO6PO60774 539 aa16.67■□□□□ 0.26
CCDC40-206ENST00000572083 TRMUO75648 421 aaKnown RBP16.67■□□□□ 0.26
CCDC40-206ENST00000572083 MRPS34P82930 218 aaKnown RBP16.67■□□□□ 0.26
CCDC40-206ENST00000572083 PSG4Q00888 419 aa16.67■□□□□ 0.26
CCDC40-206ENST00000572083 RPL18Q07020 188 aaKnown RBP16.67■□□□□ 0.26
CCDC40-206ENST00000572083 SGCAQ16586 387 aa16.67■□□□□ 0.26
CCDC40-206ENST00000572083 TSPYL5Q86VY4 417 aaPredicted RBP16.67■□□□□ 0.26
CCDC40-206ENST00000572083 RBM45Q8IUH3 476 aaKnown RBP16.67■□□□□ 0.26
CCDC40-206ENST00000572083 ZNF283Q8N7M2 679 aa16.67■□□□□ 0.26
CCDC40-206ENST00000572083 VANGL1Q8TAA9 524 aaPredicted RBP16.67■□□□□ 0.26
CCDC40-206ENST00000572083 ADAMTS16Q8TE57 1224 aa16.67■□□□□ 0.26
CCDC40-206ENST00000572083 SIGLEC11Q96RL6 698 aa16.67■□□□□ 0.26
CCDC40-206ENST00000572083 SEPHS2Q99611 448 aa16.67■□□□□ 0.26
CCDC40-206ENST00000572083 MMP27Q9H306 513 aa16.67■□□□□ 0.26
CCDC40-206ENST00000572083 EVA1AQ9H8M9 152 aa16.67■□□□□ 0.26
CCDC40-206ENST00000572083 TGDSO95455 350 aa16.66■□□□□ 0.26
CCDC40-206ENST00000572083 PLATP00750 562 aa16.66■□□□□ 0.26
CCDC40-206ENST00000572083 ACADSP16219 412 aa16.66■□□□□ 0.26
CCDC40-206ENST00000572083 PPIBP23284 216 aaKnown RBP16.66■□□□□ 0.26
CCDC40-206ENST00000572083 ZNF133P52736 654 aaPredicted RBP16.66■□□□□ 0.26
CCDC40-206ENST00000572083 RAG2P55895 527 aa16.66■□□□□ 0.26
CCDC40-206ENST00000572083 TAF11Q15544 211 aa16.66■□□□□ 0.26
CCDC40-206ENST00000572083 DUSP7Q16829 419 aa16.66■□□□□ 0.26
CCDC40-206ENST00000572083 PAGE3Q5JUK9 113 aa16.66■□□□□ 0.26
CCDC40-206ENST00000572083 OR2Z1Q8NG97 314 aa16.66■□□□□ 0.26
CCDC40-206ENST00000572083 OR4D11Q8NGI4 311 aa16.66■□□□□ 0.26
CCDC40-206ENST00000572083 NSMAFQ92636 917 aa16.66■□□□□ 0.26
CCDC40-206ENST00000572083 WNT5BQ9H1J7 359 aa16.66■□□□□ 0.26
CCDC40-206ENST00000572083 BEX1Q9HBH7 125 aa16.66■□□□□ 0.26
CCDC40-206ENST00000572083 ANGPT4Q9Y264 503 aa16.66■□□□□ 0.26
CCDC40-206ENST00000572083 CEACAM18A8MTB9 384 aa16.65■□□□□ 0.26
CCDC40-206ENST00000572083 H3BSA7 217 aa16.65■□□□□ 0.26
CCDC40-206ENST00000572083 M0QZ24 198 aa16.65■□□□□ 0.26
CCDC40-206ENST00000572083 TNFRSF1AP19438 455 aa16.65■□□□□ 0.26
CCDC40-206ENST00000572083 MDH2P40926 338 aaKnown RBP16.65■□□□□ 0.26
CCDC40-206ENST00000572083 UGT2B15P54855 530 aa16.65■□□□□ 0.26
CCDC40-206ENST00000572083 WDR4P57081 412 aaKnown RBP16.65■□□□□ 0.26
CCDC40-206ENST00000572083 PSG7Q13046 419 aa16.65■□□□□ 0.26
CCDC40-206ENST00000572083 CDK5R2Q13319 367 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms