RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 DNAJC27Q9NZQ0 273 aa12.07□□□□□ -0.48
RPAIN-209ENST00000571558 SONP18583 2426 aaKnown RBP12.06□□□□□ -0.48
RPAIN-209ENST00000571558 DEFB108AA8MXU0 73 aa12.06□□□□□ -0.48
RPAIN-209ENST00000571558 PRR23D1E9PI22 279 aaPredicted RBP12.06□□□□□ -0.48
RPAIN-209ENST00000571558 DCTN6O00399 190 aa12.06□□□□□ -0.48
RPAIN-209ENST00000571558 MSTNO14793 375 aa12.06□□□□□ -0.48
RPAIN-209ENST00000571558 IGHG1P01857 330 aa12.06□□□□□ -0.48
RPAIN-209ENST00000571558 PRR23D2P0DMB1 279 aaPredicted RBP12.06□□□□□ -0.48
RPAIN-209ENST00000571558 CLUP10909 449 aa12.06□□□□□ -0.48
RPAIN-209ENST00000571558 PAICSP22234 425 aaKnown RBP12.06□□□□□ -0.48
RPAIN-209ENST00000571558 CRYGSP22914 178 aa12.06□□□□□ -0.48
RPAIN-209ENST00000571558 ZNF133P52736 654 aaPredicted RBP12.06□□□□□ -0.48
RPAIN-209ENST00000571558 FOXF2Q12947 444 aa12.06□□□□□ -0.48
RPAIN-209ENST00000571558 C6orf141Q5SZD1 244 aa12.06□□□□□ -0.48
RPAIN-209ENST00000571558 MEDAGQ5VYS4 303 aa12.06□□□□□ -0.48
RPAIN-209ENST00000571558 NXNL2Q5VZ03 156 aa12.06□□□□□ -0.48
RPAIN-209ENST00000571558 OR2A2Q6IF42 318 aa12.06□□□□□ -0.48
RPAIN-209ENST00000571558 KRT80Q6KB66 452 aa12.06□□□□□ -0.48
RPAIN-209ENST00000571558 NIPAL3Q6P499 406 aa12.06□□□□□ -0.48
RPAIN-209ENST00000571558 UGT2A3Q6UWM9 527 aa12.06□□□□□ -0.48
RPAIN-209ENST00000571558 FAM214BQ7L5A3 538 aa12.06□□□□□ -0.48
RPAIN-209ENST00000571558 AAED1Q7RTV5 226 aa12.06□□□□□ -0.48
RPAIN-209ENST00000571558 NUFIP2Q7Z417 695 aaKnown RBP12.06□□□□□ -0.48
RPAIN-209ENST00000571558 ZBTB46Q86UZ6 589 aa12.06□□□□□ -0.48
RPAIN-209ENST00000571558 C20orf196Q8IYI0 205 aa12.06□□□□□ -0.48
RPAIN-209ENST00000571558 SYT14Q8NB59 555 aa12.06□□□□□ -0.48
RPAIN-209ENST00000571558 OR9Q1Q8NGQ5 310 aa12.06□□□□□ -0.48
RPAIN-209ENST00000571558 ZNRF4Q8WWF5 429 aa12.06□□□□□ -0.48
RPAIN-209ENST00000571558 TSSK2Q96PF2 358 aa12.06□□□□□ -0.48
RPAIN-209ENST00000571558 NUAK2Q9H093 628 aa12.06□□□□□ -0.48
RPAIN-209ENST00000571558 SYT4Q9H2B2 425 aa12.06□□□□□ -0.48
RPAIN-209ENST00000571558 NOSIPQ9Y314 301 aaKnown RBP12.06□□□□□ -0.48
RPAIN-209ENST00000571558 IGLV1-36A0A0B4J1U3 117 aa12.05□□□□□ -0.48
RPAIN-209ENST00000571558 IGKV1D-43A0A0B4J1Z2 117 aa12.05□□□□□ -0.48
RPAIN-209ENST00000571558 CCDC182A6NF36 153 aa12.05□□□□□ -0.48
RPAIN-209ENST00000571558 ZNF726A6NNF4 738 aa12.05□□□□□ -0.48
RPAIN-209ENST00000571558 AKAP8O43823 692 aaKnown RBP12.05□□□□□ -0.48
RPAIN-209ENST00000571558 F12P00748 615 aaPredicted RBP12.05□□□□□ -0.48
RPAIN-209ENST00000571558 RENP00797 406 aa12.05□□□□□ -0.48
RPAIN-209ENST00000571558 CRHP06850 196 aa12.05□□□□□ -0.48
RPAIN-209ENST00000571558 CTLA4P16410 223 aa12.05□□□□□ -0.48
RPAIN-209ENST00000571558 SPI1P17947 270 aa12.05□□□□□ -0.48
RPAIN-209ENST00000571558 KIR2DL2P43627 348 aaPredicted RBP12.05□□□□□ -0.48
RPAIN-209ENST00000571558 PTH2RP49190 550 aa12.05□□□□□ -0.48
RPAIN-209ENST00000571558 FMODQ06828 376 aa12.05□□□□□ -0.48
RPAIN-209ENST00000571558 LGALS3BPQ08380 585 aa12.05□□□□□ -0.48
RPAIN-209ENST00000571558 PHYHD1Q5SRE7 291 aa12.05□□□□□ -0.48
RPAIN-209ENST00000571558 LINC01590Q5TEZ4 76 aa12.05□□□□□ -0.48
RPAIN-209ENST00000571558 CARD17Q5XLA6 110 aa12.05□□□□□ -0.48
RPAIN-209ENST00000571558 LRFN4Q6PJG9 635 aa12.05□□□□□ -0.48
RPAIN-209ENST00000571558 PHC2Q8IXK0 858 aa12.05□□□□□ -0.48
RPAIN-209ENST00000571558 GCNT2Q8N0V5 402 aa12.05□□□□□ -0.48
RPAIN-209ENST00000571558 OR6V1Q8N148 313 aa12.05□□□□□ -0.48
RPAIN-209ENST00000571558 KISS1RQ969F8 398 aaPredicted RBP12.05□□□□□ -0.48
RPAIN-209ENST00000571558 INTS12Q96CB8 462 aaKnown RBP12.05□□□□□ -0.48
RPAIN-209ENST00000571558 Q96MT0 163 aa12.05□□□□□ -0.48
RPAIN-209ENST00000571558 UBTD1Q9HAC8 227 aa12.05□□□□□ -0.48
RPAIN-209ENST00000571558 RPRD1BQ9NQG5 326 aaKnown RBP12.05□□□□□ -0.48
RPAIN-209ENST00000571558 PLCXD1Q9NUJ7 323 aa12.05□□□□□ -0.48
RPAIN-209ENST00000571558 ZNF701Q9NV72 531 aaPredicted RBP12.05□□□□□ -0.48
RPAIN-209ENST00000571558 PARPBPQ9NWS1 579 aa12.05□□□□□ -0.48
RPAIN-209ENST00000571558 CLN6Q9NWW5 311 aa12.05□□□□□ -0.48
RPAIN-209ENST00000571558 ASB6Q9NWX5 421 aa12.05□□□□□ -0.48
RPAIN-209ENST00000571558 GLTPQ9NZD2 209 aa12.05□□□□□ -0.48
RPAIN-209ENST00000571558 CHD3Q12873 2000 aaKnown RBP12.04□□□□□ -0.48
RPAIN-209ENST00000571558 PRODHO43272 600 aa12.04□□□□□ -0.48
RPAIN-209ENST00000571558 SLC43A1O75387 559 aa12.04□□□□□ -0.48
RPAIN-209ENST00000571558 MRPL33O75394 65 aaKnown RBP12.04□□□□□ -0.48
RPAIN-209ENST00000571558 TNFSF13O75888 250 aa12.04□□□□□ -0.48
RPAIN-209ENST00000571558 GYPBP06028 91 aa12.04□□□□□ -0.48
RPAIN-209ENST00000571558 HTR1FP30939 366 aa12.04□□□□□ -0.48
RPAIN-209ENST00000571558 FMO3P31513 532 aa12.04□□□□□ -0.48
RPAIN-209ENST00000571558 SLC15A1P46059 708 aa12.04□□□□□ -0.48
RPAIN-209ENST00000571558 CSNK1A1P48729 337 aa12.04□□□□□ -0.48
RPAIN-209ENST00000571558 CLRN1P58418 232 aa12.04□□□□□ -0.48
RPAIN-209ENST00000571558 CXCR4P61073 352 aa12.04□□□□□ -0.48
RPAIN-209ENST00000571558 THEM4Q5T1C6 240 aa12.04□□□□□ -0.48
RPAIN-209ENST00000571558 SLC25A47Q6Q0C1 308 aa12.04□□□□□ -0.48
RPAIN-209ENST00000571558 MEPCEQ7L2J0 689 aaKnown RBP12.04□□□□□ -0.48
RPAIN-209ENST00000571558 LINGO2Q7L985 606 aa12.04□□□□□ -0.48
RPAIN-209ENST00000571558 GID4Q8IVV7 300 aa12.04□□□□□ -0.48
RPAIN-209ENST00000571558 WFIKKN1Q96NZ8 548 aa12.04□□□□□ -0.48
RPAIN-209ENST00000571558 TEAD3Q99594 435 aa12.04□□□□□ -0.48
RPAIN-209ENST00000571558 MED18Q9BUE0 208 aa12.04□□□□□ -0.48
RPAIN-209ENST00000571558 LINC00470Q9BZP3 86 aa12.04□□□□□ -0.48
RPAIN-209ENST00000571558 CXorf56Q9H5V9 222 aa12.04□□□□□ -0.48
RPAIN-209ENST00000571558 SRA1Q9HD15 236 aaKnown RBP12.04□□□□□ -0.48
RPAIN-209ENST00000571558 FKBP7Q9Y680 259 aa12.04□□□□□ -0.48
RPAIN-209ENST00000571558 DOCK7Q96N67 2140 aa12.04□□□□□ -0.48
RPAIN-209ENST00000571558 SLC1A7O00341 560 aa12.03□□□□□ -0.48
RPAIN-209ENST00000571558 SIAH2O43255 324 aa12.03□□□□□ -0.48
RPAIN-209ENST00000571558 SLC16A7O60669 478 aa12.03□□□□□ -0.48
RPAIN-209ENST00000571558 UPK3AO75631 287 aa12.03□□□□□ -0.48
RPAIN-209ENST00000571558 QDPRP09417 244 aa12.03□□□□□ -0.48
RPAIN-209ENST00000571558 CRHBPP24387 322 aa12.03□□□□□ -0.48
RPAIN-209ENST00000571558 OR3A2P47893 321 aa12.03□□□□□ -0.48
RPAIN-209ENST00000571558 NUDT6P53370 316 aa12.03□□□□□ -0.48
RPAIN-209ENST00000571558 APOFQ13790 326 aa12.03□□□□□ -0.48
RPAIN-209ENST00000571558 ETFDHQ16134 617 aa12.03□□□□□ -0.48
RPAIN-209ENST00000571558 C10orf128Q5T292 105 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms