RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 TAGLN3Q9UI15 199 aa11.8□□□□□ -0.52
GTF3C1-211ENST00000569653 TRAV27A0A087WT01 109 aa11.79□□□□□ -0.52
GTF3C1-211ENST00000569653 NPIPB13A6NJU9 1138 aa11.79□□□□□ -0.52
GTF3C1-211ENST00000569653 NPIPB4C9JG80 1138 aa11.79□□□□□ -0.52
GTF3C1-211ENST00000569653 MCIDASD6RGH6 385 aa11.79□□□□□ -0.52
GTF3C1-211ENST00000569653 GMNNO75496 209 aa11.79□□□□□ -0.52
GTF3C1-211ENST00000569653 PRSS23O95084 383 aa11.79□□□□□ -0.52
GTF3C1-211ENST00000569653 ZNF682O95780 498 aa11.79□□□□□ -0.52
GTF3C1-211ENST00000569653 SERPINA1P01009 418 aa11.79□□□□□ -0.52
GTF3C1-211ENST00000569653 AVPP01185 164 aa11.79□□□□□ -0.52
GTF3C1-211ENST00000569653 IGHMP01871 453 aa11.79□□□□□ -0.52
GTF3C1-211ENST00000569653 IFNW1P05000 195 aa11.79□□□□□ -0.52
GTF3C1-211ENST00000569653 LCKP06239 509 aa11.79□□□□□ -0.52
GTF3C1-211ENST00000569653 T-ENOLP0DO92 83 aa11.79□□□□□ -0.52
GTF3C1-211ENST00000569653 GAAP10253 952 aa11.79□□□□□ -0.52
GTF3C1-211ENST00000569653 ITGA2P17301 1181 aa11.79□□□□□ -0.52
GTF3C1-211ENST00000569653 HNF1AP20823 631 aa11.79□□□□□ -0.52
GTF3C1-211ENST00000569653 DAP3P51398 398 aaKnown RBP11.79□□□□□ -0.52
GTF3C1-211ENST00000569653 KLF3P57682 345 aaPredicted RBP11.79□□□□□ -0.52
GTF3C1-211ENST00000569653 MRPS11P82912 194 aaKnown RBP11.79□□□□□ -0.52
GTF3C1-211ENST00000569653 PSG4Q00888 419 aa11.79□□□□□ -0.52
GTF3C1-211ENST00000569653 NKPD1Q17RQ9 610 aa11.79□□□□□ -0.52
GTF3C1-211ENST00000569653 SPATA46Q5T0L3 261 aa11.79□□□□□ -0.52
GTF3C1-211ENST00000569653 FOXL2NBQ6ZUU3 175 aa11.79□□□□□ -0.52
GTF3C1-211ENST00000569653 CBLL1Q75N03 491 aa11.79□□□□□ -0.52
GTF3C1-211ENST00000569653 ZNF519Q8TB69 540 aa11.79□□□□□ -0.52
GTF3C1-211ENST00000569653 SYNPRQ8TBG9 265 aa11.79□□□□□ -0.52
GTF3C1-211ENST00000569653 PRRC1Q96M27 445 aa11.79□□□□□ -0.52
GTF3C1-211ENST00000569653 WNT5BQ9H1J7 359 aa11.79□□□□□ -0.52
GTF3C1-211ENST00000569653 TXNIPQ9H3M7 391 aa11.79□□□□□ -0.52
GTF3C1-211ENST00000569653 SIAEQ9HAT2 523 aa11.79□□□□□ -0.52
GTF3C1-211ENST00000569653 HINT3Q9NQE9 182 aaKnown RBP11.79□□□□□ -0.52
GTF3C1-211ENST00000569653 NDE1Q9NXR1 346 aa11.79□□□□□ -0.52
GTF3C1-211ENST00000569653 MED31Q9Y3C7 131 aa11.79□□□□□ -0.52
GTF3C1-211ENST00000569653 ZSCAN5BA6NJL1 495 aa11.78□□□□□ -0.52
GTF3C1-211ENST00000569653 B4DSR2 109 aa11.78□□□□□ -0.52
GTF3C1-211ENST00000569653 H7C1C5 153 aa11.78□□□□□ -0.52
GTF3C1-211ENST00000569653 PPIHO43447 177 aaKnown RBP11.78□□□□□ -0.52
GTF3C1-211ENST00000569653 DEAF1O75398 565 aaPredicted RBP11.78□□□□□ -0.52
GTF3C1-211ENST00000569653 MSMBP08118 114 aa11.78□□□□□ -0.52
GTF3C1-211ENST00000569653 IFI30P13284 250 aa11.78□□□□□ -0.52
GTF3C1-211ENST00000569653 ZNF84P51523 738 aa11.78□□□□□ -0.52
GTF3C1-211ENST00000569653 MNAT1P51948 309 aa11.78□□□□□ -0.52
GTF3C1-211ENST00000569653 LCN6P62502 163 aa11.78□□□□□ -0.52
GTF3C1-211ENST00000569653 ERVK-25P63136 954 aa11.78□□□□□ -0.52
GTF3C1-211ENST00000569653 ST3GAL3Q11203 375 aa11.78□□□□□ -0.52
GTF3C1-211ENST00000569653 ENDOGQ14249 297 aaKnown RBP11.78□□□□□ -0.52
GTF3C1-211ENST00000569653 KRT72Q14CN4 511 aa11.78□□□□□ -0.52
GTF3C1-211ENST00000569653 TBC1D28Q2M2D7 210 aa11.78□□□□□ -0.52
GTF3C1-211ENST00000569653 IFI44LQ53G44 452 aa11.78□□□□□ -0.52
GTF3C1-211ENST00000569653 OTPQ5XKR4 325 aa11.78□□□□□ -0.52
GTF3C1-211ENST00000569653 FKBP9P1Q75LS8 142 aa11.78□□□□□ -0.52
GTF3C1-211ENST00000569653 DPPA2Q7Z7J5 298 aa11.78□□□□□ -0.52
GTF3C1-211ENST00000569653 NRMQ8IXM6 262 aa11.78□□□□□ -0.52
GTF3C1-211ENST00000569653 PGAM4Q8N0Y7 254 aa11.78□□□□□ -0.52
GTF3C1-211ENST00000569653 ICA1LQ8NDH6 482 aa11.78□□□□□ -0.52
GTF3C1-211ENST00000569653 OR1J1Q8NGS3 322 aa11.78□□□□□ -0.52
GTF3C1-211ENST00000569653 OR13C2Q8NGS9 318 aa11.78□□□□□ -0.52
GTF3C1-211ENST00000569653 IPCEF1Q8WWN9 437 aaPredicted RBP11.78□□□□□ -0.52
GTF3C1-211ENST00000569653 BPIFA2Q96DR5 249 aa11.78□□□□□ -0.52
GTF3C1-211ENST00000569653 MARS2Q96GW9 593 aaKnown RBP11.78□□□□□ -0.52
GTF3C1-211ENST00000569653 SMURF2Q9HAU4 748 aa11.78□□□□□ -0.52
GTF3C1-211ENST00000569653 HIF1ANQ9NWT6 349 aa11.78□□□□□ -0.52
GTF3C1-211ENST00000569653 DCAF16Q9NXF7 216 aa11.78□□□□□ -0.52
GTF3C1-211ENST00000569653 RPS6KA6Q9UK32 745 aa11.78□□□□□ -0.52
GTF3C1-211ENST00000569653 ZNF346Q9UL40 294 aaKnown RBP11.78□□□□□ -0.52
GTF3C1-211ENST00000569653 DYSFO75923 2080 aa11.78□□□□□ -0.52
GTF3C1-211ENST00000569653 CDC42EP2O14613 210 aa11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 VENTXO95231 258 aa11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 NGFP01138 241 aa11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 IGHV1-46P01743 117 aa11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 IGHV3-13P01766 116 aa11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 NCK1P16333 377 aa11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 STOMP27105 288 aa11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 LAP3P28838 519 aa11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 MMP15P51511 669 aa11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 TMEM33P57088 247 aa11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 RPL27P61353 136 aaKnown RBP11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 MXRA7P84157 204 aa11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 MVKQ03426 396 aa11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 CD47Q08722 323 aa11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 SGCAQ16586 387 aa11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 ALG10Q5BKT4 473 aa11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 SAMD4BQ5PRF9 694 aaKnown RBP11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 THEM4Q5T1C6 240 aa11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 FAM27BQ5VT28 67 aa11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 TBPL2Q6SJ96 375 aa11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 UGT2A3Q6UWM9 527 aa11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 C16orf89Q6UX73 402 aa11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 OFCC1Q8IZS5 231 aa11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 SEMA6DQ8NFY4 1073 aa11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 OR51A7Q8NH64 312 aa11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 TMEM186Q96B77 213 aa11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 HSH2DQ96JZ2 352 aa11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 ALG12Q9BV10 488 aa11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 ZNF416Q9BWM5 594 aa11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 OR2H1Q9GZK4 316 aa11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 C1orf198Q9H425 327 aa11.77□□□□□ -0.53
GTF3C1-211ENST00000569653 POFUT1Q9H488 388 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms