RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 GLAP06280 429 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 NMBP08949 121 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 GRB2P62993 217 aaKnown RBP6.54□□□□□ -1.36
CNOT1-216ENST00000569240 ZNF124Q15973 351 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 KIAA0895LQ68EN5 471 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 FAM71E1Q6IPT2 247 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 TMEM184AQ6ZMB5 413 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 CISD2Q8N5K1 135 aaKnown RBP6.54□□□□□ -1.36
CNOT1-216ENST00000569240 FAM3CQ92520 227 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 MANBALQ9NQG1 85 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 TBC1D3DA0A087WVF3 549 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 A0A1B0GV50 99 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 TBC1D3LB9A6J9 549 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 NRASP01111 189 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 HRASP01112 189 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 KRASP01116 189 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 TBC1D3HP0C7X1 549 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 STAG3L3P0CL85 134 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 PTGFRP43088 359 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 ECH1Q13011 328 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 TBC1D3CQ6IPX1 549 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 TBC1D3Q8IZP1 549 aaPredicted RBP6.54□□□□□ -1.36
CNOT1-216ENST00000569240 CSF3RQ99062 836 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 GCM1Q9NP62 436 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 LRIT1Q9P2V4 623 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 VDAC3Q9Y277 283 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 MED1Q15648 1581 aaPredicted RBP6.54□□□□□ -1.36
CNOT1-216ENST00000569240 A0A0U1RQF3 1178 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 MEIS3P1A6NDR6 274 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 SUB1P53999 127 aaKnown RBP eCLIP6.54□□□□□ -1.363e-6■■□□□ 12.5
CNOT1-216ENST00000569240 SELENOVP59797 346 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 ODF4Q2M2E3 257 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 ARHGAP11BQ3KRB8 267 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 PKDCCQ504Y2 493 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 PLA1AQ53H76 456 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 ZNF764Q96H86 408 aaPredicted RBP6.54□□□□□ -1.36
CNOT1-216ENST00000569240 MYH3P11055 1940 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 FAM72CH0Y354 149 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 DUSP11O75319 330 aaKnown RBP6.54□□□□□ -1.36
CNOT1-216ENST00000569240 SEMG1P04279 462 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 BSGP35613 385 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 OLIG2Q13516 323 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 KIR2DS3Q14952 304 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 C9orf152Q5JTZ5 239 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 FAM72AQ5TYM5 149 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 FAM72DQ6L9T8 149 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 MEX3BQ6ZN04 569 aaKnown RBP6.54□□□□□ -1.36
CNOT1-216ENST00000569240 USP53Q70EK8 1073 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 FAM72BQ86X60 149 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 FAM129CQ86XR2 697 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 OR4C16Q8NGL9 310 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 PMCHL2Q9BQD1 86 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 MSRAQ9UJ68 235 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 TRAPPC1Q9Y5R8 145 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 MPC2O95563 127 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 KLF8O95600 359 aaPredicted RBP6.53□□□□□ -1.36
CNOT1-216ENST00000569240 CD52P31358 61 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 ZNF92Q03936 586 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 ELOBQ15370 118 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 LINC00303Q3SY05 128 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 TMEM130Q8N3G9 435 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 FAM181AQ8N9Y4 354 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 OR9A2Q8NGT5 310 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 EMID1Q96A84 441 aaPredicted RBP6.53□□□□□ -1.36
CNOT1-216ENST00000569240 MACROD1Q9BQ69 325 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 KCNK12Q9HB15 430 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 MRPS18AQ9NVS2 196 aaKnown RBP6.53□□□□□ -1.36
CNOT1-216ENST00000569240 FTSJ1Q9UET6 329 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 SLC5A6Q9Y289 635 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 CARHSP1Q9Y2V2 147 aaKnown RBP6.53□□□□□ -1.36
CNOT1-216ENST00000569240 SLC45A1Q9Y2W3 748 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 CLN5O75503 358 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 EVX2Q03828 476 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 C2orf76Q3KRA6 126 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 ZNRF4Q8WWF5 429 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 RAB40CQ96S21 281 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 FLVCR1Q9Y5Y0 555 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 URGCP-MRPS24S4R325 110 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 TBC1D3IA0A087WXS9 549 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 DBX1A6NMT0 343 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 ERVH48-1M5A8F1 160 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 BRINP1O60477 761 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 SLC16A7O60669 478 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 HOXD4P09016 255 aaPredicted RBP6.53□□□□□ -1.36
CNOT1-216ENST00000569240 APEHP13798 732 aaKnown RBP6.53□□□□□ -1.36
CNOT1-216ENST00000569240 BTF3P20290 206 aaKnown RBP6.53□□□□□ -1.36
CNOT1-216ENST00000569240 HSD17B7P56937 341 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 FAM110CQ1W6H9 321 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 AWAT1Q58HT5 328 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 LRRC73Q5JTD7 316 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 RGS7BPQ6MZT1 257 aaPredicted RBP6.53□□□□□ -1.36
CNOT1-216ENST00000569240 OGFOD3Q6PK18 319 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 SUSD1Q6UWL2 747 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 OR2T10Q8NGZ9 312 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 CMTM2Q8TAZ6 248 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 ARRDC2Q8TBH0 407 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 DTD1Q8TEA8 209 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 ABHD14BQ96IU4 210 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 ASB16Q96NS5 453 aa6.53□□□□□ -1.36
CNOT1-216ENST00000569240 ATP5SQ99766 215 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms