RNA–Protein interactions for RNA: ENST00000567947.1

CBFB-208, Transcript of core-binding factor subunit beta, human

TSL 3

Gene CBFB, Length 610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBFB-208	ENST00000567947	CAMK2A	Q9UQM7	478 aa		4.35	□□□□□ -1.71
CBFB-208	ENST00000567947	DLGAP4	Q9Y2H0	992 aa		4.35	□□□□□ -1.71
CBFB-208	ENST00000567947	TMED3	Q9Y3Q3	217 aa		4.35	□□□□□ -1.71
CBFB-208	ENST00000567947	OR51B4	Q9Y5P0	310 aa		4.35	□□□□□ -1.71
CBFB-208	ENST00000567947	GOLGA4	Q13439	2230 aa	Known RBP	4.35	□□□□□ -1.71
CBFB-208	ENST00000567947	CACNA1B	Q00975	2339 aa		4.35	□□□□□ -1.71
CBFB-208	ENST00000567947	FAM208B	Q5VWN6	2430 aa		4.35	□□□□□ -1.71
CBFB-208	ENST00000567947	BPTF	Q12830	3046 aa		4.35	□□□□□ -1.71
CBFB-208	ENST00000567947	ANKRD36	A6QL64	1941 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	RNF222	A6NCQ9	220 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	COLCA2	A8K830	154 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	WASH3P	C4AMC7	463 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	LRRN3	E7EW58	273 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947		M0QYV0	167 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	TNFRSF11B	O00300	401 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	ITGB1BP1	O14713	200 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	TCAP	O15273	167 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	FFAR2	O15552	330 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	FGF16	O43320	207 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	LAT	O43561	262 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	GMFG	O60234	142 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	FADS1	O60427	444 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	CLDN11	O75508	207 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	GJB3	O75712	270 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	TBX18	O95935	607 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	IFNA17	P01571	189 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	HLA-DQA2	P01906	255 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	OPN1LW	P04000	364 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	CRH	P06850	196 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	HEXB	P07686	556 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	MELTF	P08582	738 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	LINC00032	P0C843	101 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	C1GALT1C1L	P0DN25	315 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	SLC25A4	P12235	298 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	MUC1	P15941	1255 aa	Predicted RBP	4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	CXCL2	P19875	107 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	CXCL3	P19876	107 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	PSMB1	P20618	241 aa	Known RBP	4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	ITGA3	P26006	1051 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	GIF	P27352	417 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	S100A2	P29034	98 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	ADORA2B	P29275	332 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	CORO1A	P31146	461 aa	Known RBP	4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	ADRA1A	P35348	466 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	KIR3DL2	P43630	455 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	CDX1	P47902	265 aa	Predicted RBP	4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	CCR9	P51686	369 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	XK	P51811	444 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	CRISP1	P54107	249 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	GAS1	P54826	345 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	NUTF2	P61970	127 aa	Known RBP	4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	SNRPE	P62304	92 aa	Known RBP	4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	DLK1	P80370	383 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	PLIN5	Q00G26	463 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	PDZK1IP1	Q13113	114 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	ELAVL3	Q14576	367 aa	Known RBP	4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	NFATC4	Q14934	902 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	P2RY14	Q15391	338 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	EXOC3L2	Q2M3D2	409 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	HNRNPA1L2	Q32P51	320 aa	Known RBP	4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	SLC36A2	Q495M3	483 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	SOWAHC	Q53LP3	525 aa	Predicted RBP	4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	HIST2H3PS2	Q5TEC6	136 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	TMEM244	Q5VVB8	128 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	FAM46C	Q5VWP2	391 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	C12orf73	Q69YU5	71 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	PTRHD1	Q6GMV3	140 aa	Known RBP	4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	FRMPD2B	Q6IN97	320 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	TRNP1	Q6NT89	227 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	H3F3C	Q6NXT2	135 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	NCEH1	Q6PIU2	408 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	CASP12	Q6UXS9	341 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947		Q6ZSR9	355 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947		Q6ZSV7	163 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	SERPINA12	Q8IW75	414 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	PUSL1	Q8N0Z8	303 aa	Known RBP	4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	TRAM1L1	Q8N609	369 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	ACVR1C	Q8NER5	493 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	BPIFC	Q8NFQ6	507 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	OR10G2	Q8NGC3	310 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	OR1J4	Q8NGS1	313 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	OR9A4	Q8NGU2	314 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	OR10K1	Q8NGX5	313 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	OR5R1	Q8NH85	324 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	COQ8A	Q8NI60	647 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	HAVCR2	Q8TDQ0	301 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	PHYHIP	Q92561	330 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	ARL11	Q969Q4	196 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	TMEM203	Q969S6	136 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	SAT2	Q96F10	170 aa	Predicted RBP	4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	ALG14	Q96F25	216 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	ATXN7L3B	Q96GX2	97 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	TEX37	Q96LM6	180 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	HBEGF	Q99075	208 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	BARD1	Q99728	777 aa	Known RBP	4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	C19orf43	Q9BQ61	176 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	CMSS1	Q9BQ75	279 aa	Known RBP	4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	CRB3	Q9BUF7	120 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	GGACT	Q9BVM4	153 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	FAIM2	Q9BWQ8	316 aa		4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms