RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 RBM15BQ8NDT2 890 aaKnown RBP4.11□□□□□ -1.75
CLK3-219ENST00000567805 OR13C2Q8NGS9 318 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 OR51A7Q8NH64 312 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 FGFBP3Q8TAT2 258 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 ZNF519Q8TB69 540 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 SYNPRQ8TBG9 265 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 FAM162AQ96A26 154 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 NABP1Q96AH0 204 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 NMD3Q96D46 503 aaKnown RBP4.11□□□□□ -1.75
CLK3-219ENST00000567805 MSI2Q96DH6 328 aaKnown RBP4.11□□□□□ -1.75
CLK3-219ENST00000567805 HSH2DQ96JZ2 352 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 TSPAN32Q96QS1 320 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 RBP7Q96R05 134 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 CITED4Q96RK1 184 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 ELAC2Q9BQ52 826 aaKnown RBP4.11□□□□□ -1.75
CLK3-219ENST00000567805 SYT3Q9BQG1 590 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 BCL2L14Q9BZR8 327 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 NDEL1Q9GZM8 345 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 FAM107BQ9H098 131 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 TPK1Q9H3S4 243 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 NMNAT1Q9HAN9 279 aaPredicted RBP4.11□□□□□ -1.75
CLK3-219ENST00000567805 CDH20Q9HBT6 801 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 CCNB1IP1Q9NPC3 277 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 SLCO1C1Q9NYB5 712 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 ADA2Q9NZK5 511 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 RHCGQ9UBD6 479 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 REV1Q9UBZ9 1251 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 DUSP13Q9UII6 198 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 GPR160Q9UJ42 338 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 ZNF346Q9UL40 294 aaKnown RBP4.11□□□□□ -1.75
CLK3-219ENST00000567805 KCNS2Q9ULS6 477 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 FZR1Q9UM11 496 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 SAMD4AQ9UPU9 718 aaKnown RBP4.11□□□□□ -1.75
CLK3-219ENST00000567805 TMEM5Q9Y2B1 443 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 UGT2A1Q9Y4X1 527 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 ENPP4Q9Y6X5 453 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.11□□□□□ -1.751e-6■■□□□ 12.5
CLK3-219ENST00000567805 DNHD1Q96M86 4753 aa4.11□□□□□ -1.75
CLK3-219ENST00000567805 ANK2Q01484 3957 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 IGLV3-9A0A075B6K5 115 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 IGKV1D-43A0A0B4J1Z2 117 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 LOC100289279A0A1B0GTE1 492 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 A0A1W2PPW3 197 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 A6NHS1 94 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 C17orf100A8MU93 164 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 H3BSA7 217 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 XKRYO14609 159 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 CDC42EP2O14613 210 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 AHCYL1O43865 530 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 CLPTM1O96005 669 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 IGHV3-13P01766 116 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 HPXP02790 462 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 MT-ND5P03915 603 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 LCKP06239 509 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 H1F0P07305 194 aaKnown RBP4.1□□□□□ -1.75
CLK3-219ENST00000567805 CD14P08571 375 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 CST2P09228 141 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 FAM157BP0CG42 384 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 NAT2P11245 290 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 CCL2P13500 99 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 HSD17B1P14061 328 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 NCK1P16333 377 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 ZNF32P17041 273 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 ITGA2P17301 1181 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 HNF1AP20823 631 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 DRD4P21917 467 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 ACHEP22303 614 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 STOMP27105 288 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 APEX1P27695 318 aaKnown RBP4.1□□□□□ -1.75
CLK3-219ENST00000567805 LAP3P28838 519 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 CDAP32320 146 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 THBS2P35442 1172 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 RPL4P36578 427 aaKnown RBP4.1□□□□□ -1.75
CLK3-219ENST00000567805 ALDH3B1P43353 468 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 GPR4P46093 362 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 GDI2P50395 445 aaKnown RBP4.1□□□□□ -1.75
CLK3-219ENST00000567805 SEC24CP53992 1094 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 ERVK-25P63136 954 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 FHL1Q13642 323 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 KRT72Q14CN4 511 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 MAD2L1BPQ15013 274 aaPredicted RBP4.1□□□□□ -1.75
CLK3-219ENST00000567805 SGCAQ16586 387 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 MOGQ16653 247 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 NKPD1Q17RQ9 610 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 PCGF3Q3KNV8 242 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 ZBED5Q49AG3 693 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 PABPC1L2AQ5JQF8 200 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 FGD3Q5JSP0 725 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 ELFN2Q5R3F8 820 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 GLYATQ6IB77 296 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 TMEM154Q6P9G4 183 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 TBPL2Q6SJ96 375 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 FOXL2NBQ6ZUU3 175 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 CXXC5Q7LFL8 322 aaKnown RBP4.1□□□□□ -1.75
CLK3-219ENST00000567805 TSEN54Q7Z6J9 526 aaKnown RBP4.1□□□□□ -1.75
CLK3-219ENST00000567805 SYT9Q86SS6 491 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 IGFN1Q86VF2 1251 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 MEX3DQ86XN8 651 aaKnown RBP4.1□□□□□ -1.75
CLK3-219ENST00000567805 CLDN22Q8N7P3 220 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 ARIH2OSQ8N7S6 290 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms