RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 CDAP32320 146 aa10.61□□□□□ -0.71
SF3B3-208ENST00000567250 IDH3GP51553 393 aaPredicted RBP10.61□□□□□ -0.71
SF3B3-208ENST00000567250 LSM6P62312 80 aaKnown RBP10.61□□□□□ -0.71
SF3B3-208ENST00000567250 RAB1AP62820 205 aa10.61□□□□□ -0.71
SF3B3-208ENST00000567250 SCRN3Q0VDG4 424 aa10.61□□□□□ -0.71
SF3B3-208ENST00000567250 CRMP1Q14194 572 aa10.61□□□□□ -0.71
SF3B3-208ENST00000567250 ZNF704Q6ZNC4 412 aaPredicted RBP10.61□□□□□ -0.71
SF3B3-208ENST00000567250 SYT9Q86SS6 491 aa10.61□□□□□ -0.71
SF3B3-208ENST00000567250 MDP1Q86V88 176 aa10.61□□□□□ -0.71
SF3B3-208ENST00000567250 LRRC18Q8N456 261 aa10.61□□□□□ -0.71
SF3B3-208ENST00000567250 CBR4Q8N4T8 237 aa10.61□□□□□ -0.71
SF3B3-208ENST00000567250 NPEPL1Q8NDH3 523 aa10.61□□□□□ -0.71
SF3B3-208ENST00000567250 OR10H5Q8NGA6 315 aa10.61□□□□□ -0.71
SF3B3-208ENST00000567250 SH3GL3Q99963 347 aa10.61□□□□□ -0.71
SF3B3-208ENST00000567250 GABARAPL3Q9BY60 117 aa10.61□□□□□ -0.71
SF3B3-208ENST00000567250 FN3KQ9H479 309 aa10.61□□□□□ -0.71
SF3B3-208ENST00000567250 DCLRE1BQ9H816 532 aa10.61□□□□□ -0.71
SF3B3-208ENST00000567250 ZNF224Q9NZL3 707 aa10.61□□□□□ -0.71
SF3B3-208ENST00000567250 TMEFF2Q9UIK5 374 aaPredicted RBP10.61□□□□□ -0.71
SF3B3-208ENST00000567250 POU2F3Q9UKI9 436 aa10.61□□□□□ -0.71
SF3B3-208ENST00000567250 COA3Q9Y2R0 106 aaPredicted RBP10.61□□□□□ -0.71
SF3B3-208ENST00000567250 RAI1Q7Z5J4 1906 aaPredicted RBP10.6□□□□□ -0.71
SF3B3-208ENST00000567250 IGLV1-36A0A0B4J1U3 117 aa10.6□□□□□ -0.71
SF3B3-208ENST00000567250 IQCMA0A1B0GVH7 501 aa10.6□□□□□ -0.71
SF3B3-208ENST00000567250 DPRXA6NFQ7 191 aa10.6□□□□□ -0.71
SF3B3-208ENST00000567250 PRR23D1E9PI22 279 aaPredicted RBP10.6□□□□□ -0.71
SF3B3-208ENST00000567250 SURF4O15260 269 aa10.6□□□□□ -0.71
SF3B3-208ENST00000567250 SIAH2O43255 324 aa10.6□□□□□ -0.71
SF3B3-208ENST00000567250 PRODHO43272 600 aa10.6□□□□□ -0.71
SF3B3-208ENST00000567250 HLA-DQA2P01906 255 aa10.6□□□□□ -0.71
SF3B3-208ENST00000567250 CECR9P0C854 216 aa10.6□□□□□ -0.71
SF3B3-208ENST00000567250 PRR23D2P0DMB1 279 aaPredicted RBP10.6□□□□□ -0.71
SF3B3-208ENST00000567250 ANPEPP15144 967 aa10.6□□□□□ -0.71
SF3B3-208ENST00000567250 SLC25A1P53007 311 aa10.6□□□□□ -0.71
SF3B3-208ENST00000567250 ELF3P78545 371 aaPredicted RBP10.6□□□□□ -0.71
SF3B3-208ENST00000567250 HSF2Q03933 536 aa10.6□□□□□ -0.71
SF3B3-208ENST00000567250 PIGFQ07326 219 aa10.6□□□□□ -0.71
SF3B3-208ENST00000567250 AQP6Q13520 282 aa10.6□□□□□ -0.71
SF3B3-208ENST00000567250 PTGES3Q15185 160 aaKnown RBP10.6□□□□□ -0.71
SF3B3-208ENST00000567250 TRIP10Q15642 601 aa10.6□□□□□ -0.71
SF3B3-208ENST00000567250 ETFDHQ16134 617 aa10.6□□□□□ -0.71
SF3B3-208ENST00000567250 ADAM5Q6NVV9 412 aa10.6□□□□□ -0.71
SF3B3-208ENST00000567250 SLC22A25Q6T423 547 aa10.6□□□□□ -0.71
SF3B3-208ENST00000567250 ZBTB49Q6ZSB9 765 aa10.6□□□□□ -0.71
SF3B3-208ENST00000567250 ALDH16A1Q8IZ83 802 aa10.6□□□□□ -0.71
SF3B3-208ENST00000567250 OR6V1Q8N148 313 aa10.6□□□□□ -0.71
SF3B3-208ENST00000567250 CYB561A3Q8NBI2 242 aa10.6□□□□□ -0.71
SF3B3-208ENST00000567250 TMEM204Q9BSN7 226 aa10.6□□□□□ -0.71
SF3B3-208ENST00000567250 C1QTNF6Q9BXI9 259 aa10.6□□□□□ -0.71
SF3B3-208ENST00000567250 RIBC2Q9H4K1 309 aa10.6□□□□□ -0.71
SF3B3-208ENST00000567250 SRA1Q9HD15 236 aaKnown RBP10.6□□□□□ -0.71
SF3B3-208ENST00000567250 B3GNT2Q9NY97 397 aa10.6□□□□□ -0.71
SF3B3-208ENST00000567250 KCNG2Q9UJ96 466 aa10.6□□□□□ -0.71
SF3B3-208ENST00000567250 B9D1Q9UPM9 204 aa10.6□□□□□ -0.71
SF3B3-208ENST00000567250 ANKRD17O75179 2603 aaKnown RBP10.6□□□□□ -0.71
SF3B3-208ENST00000567250 FBN2P35556 2912 aa10.6□□□□□ -0.71
SF3B3-208ENST00000567250 LRBAP50851 2863 aa10.59□□□□□ -0.71
SF3B3-208ENST00000567250 IGHV1-18A0A0C4DH31 117 aa10.59□□□□□ -0.71
SF3B3-208ENST00000567250 ZNF503-AS2A6NEH8 195 aa10.59□□□□□ -0.71
SF3B3-208ENST00000567250 ZAR1LA6NP61 321 aa10.59□□□□□ -0.71
SF3B3-208ENST00000567250 MITFO75030 526 aaPredicted RBP10.59□□□□□ -0.71
SF3B3-208ENST00000567250 MMP7P09237 267 aaPredicted RBP10.59□□□□□ -0.71
SF3B3-208ENST00000567250 GAAP10253 952 aa10.59□□□□□ -0.71
SF3B3-208ENST00000567250 PRF1P14222 555 aa10.59□□□□□ -0.71
SF3B3-208ENST00000567250 ZNF14P17017 642 aaPredicted RBP10.59□□□□□ -0.71
SF3B3-208ENST00000567250 ZNF32P17041 273 aa10.59□□□□□ -0.71
SF3B3-208ENST00000567250 LOXP28300 417 aaPredicted RBP10.59□□□□□ -0.71
SF3B3-208ENST00000567250 CDH11P55287 796 aa10.59□□□□□ -0.71
SF3B3-208ENST00000567250 NAAAQ02083 359 aa10.59□□□□□ -0.71
SF3B3-208ENST00000567250 SNAPC1Q16533 368 aa10.59□□□□□ -0.71
SF3B3-208ENST00000567250 KCNMB1Q16558 191 aa10.59□□□□□ -0.71
SF3B3-208ENST00000567250 TBC1D28Q2M2D7 210 aa10.59□□□□□ -0.71
SF3B3-208ENST00000567250 SLX4IPQ5VYV7 408 aa10.59□□□□□ -0.71
SF3B3-208ENST00000567250 ACSM5Q6NUN0 579 aa10.59□□□□□ -0.71
SF3B3-208ENST00000567250 CDC20BQ86Y33 519 aa10.59□□□□□ -0.71
SF3B3-208ENST00000567250 KBTBD8Q8NFY9 601 aa10.59□□□□□ -0.71
SF3B3-208ENST00000567250 SLC26A10Q8NG04 563 aa10.59□□□□□ -0.71
SF3B3-208ENST00000567250 OR9Q1Q8NGQ5 310 aa10.59□□□□□ -0.71
SF3B3-208ENST00000567250 OR1J2Q8NGS2 313 aa10.59□□□□□ -0.71
SF3B3-208ENST00000567250 HTRA1Q92743 480 aa10.59□□□□□ -0.71
SF3B3-208ENST00000567250 FBXW5Q969U6 566 aa10.59□□□□□ -0.71
SF3B3-208ENST00000567250 OTULINQ96BN8 352 aa10.59□□□□□ -0.71
SF3B3-208ENST00000567250 RDH12Q96NR8 316 aa10.59□□□□□ -0.71
SF3B3-208ENST00000567250 TSSK2Q96PF2 358 aa10.59□□□□□ -0.71
SF3B3-208ENST00000567250 ZNF416Q9BWM5 594 aa10.59□□□□□ -0.71
SF3B3-208ENST00000567250 VCXQ9H320 206 aa10.59□□□□□ -0.71
SF3B3-208ENST00000567250 HEATR1Q9H583 2144 aaKnown RBP10.59□□□□□ -0.71
SF3B3-208ENST00000567250 EMC7Q9NPA0 242 aa10.59□□□□□ -0.71
SF3B3-208ENST00000567250 FAIMQ9NVQ4 179 aa10.59□□□□□ -0.71
SF3B3-208ENST00000567250 NDRG4Q9ULP0 352 aaKnown RBP10.59□□□□□ -0.71
SF3B3-208ENST00000567250 MOKQ9UQ07 419 aa10.59□□□□□ -0.71
SF3B3-208ENST00000567250 TIMM10BQ9Y5J6 103 aa10.59□□□□□ -0.71
SF3B3-208ENST00000567250 ABCA12Q86UK0 2595 aa10.59□□□□□ -0.71
SF3B3-208ENST00000567250 ATP6V1G2-DDX39BF2Z307 99 aa10.58□□□□□ -0.72
SF3B3-208ENST00000567250 DCTN6O00399 190 aa10.58□□□□□ -0.72
SF3B3-208ENST00000567250 TMCC2O75069 709 aa10.58□□□□□ -0.72
SF3B3-208ENST00000567250 SERPINA5P05154 406 aa10.58□□□□□ -0.72
SF3B3-208ENST00000567250 ZNF823P16415 610 aa10.58□□□□□ -0.72
SF3B3-208ENST00000567250 SPI1P17947 270 aa10.58□□□□□ -0.72
SF3B3-208ENST00000567250 FMO3P31513 532 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms