RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 FMODQ06828 376 aa12.17□□□□□ -0.46
COMMD4-216ENST00000567023 CD47Q08722 323 aa12.17□□□□□ -0.46
COMMD4-216ENST00000567023 TRAM2Q15035 370 aa12.17□□□□□ -0.46
COMMD4-216ENST00000567023 KRTAP24-1Q3LI83 254 aa12.17□□□□□ -0.46
COMMD4-216ENST00000567023 FAM205BPQ63HN1 556 aa12.17□□□□□ -0.46
COMMD4-216ENST00000567023 FOXL2NBQ6ZUU3 175 aa12.17□□□□□ -0.46
COMMD4-216ENST00000567023 CBLL1Q75N03 491 aa12.17□□□□□ -0.46
COMMD4-216ENST00000567023 GEMIN6Q8WXD5 167 aaKnown RBP12.17□□□□□ -0.46
COMMD4-216ENST00000567023 ACOT11Q8WXI4 607 aaPredicted RBP12.17□□□□□ -0.46
COMMD4-216ENST00000567023 LRRC37BQ96QE4 947 aa12.17□□□□□ -0.46
COMMD4-216ENST00000567023 TSPAN32Q96QS1 320 aa12.17□□□□□ -0.46
COMMD4-216ENST00000567023 FNDC11Q9BVV2 318 aa12.17□□□□□ -0.46
COMMD4-216ENST00000567023 REPIN1Q9BWE0 567 aaKnown RBP12.17□□□□□ -0.46
COMMD4-216ENST00000567023 ZNF416Q9BWM5 594 aa12.17□□□□□ -0.46
COMMD4-216ENST00000567023 CCNB1IP1Q9NPC3 277 aa12.17□□□□□ -0.46
COMMD4-216ENST00000567023 ZNF275Q9NSD4 429 aaPredicted RBP12.17□□□□□ -0.46
COMMD4-216ENST00000567023 LOC100509620A0A075B734 347 aa12.16□□□□□ -0.46
COMMD4-216ENST00000567023 A0A087WUU8 490 aa12.16□□□□□ -0.46
COMMD4-216ENST00000567023 J3KTA2 159 aa12.16□□□□□ -0.46
COMMD4-216ENST00000567023 CXCR6O00574 342 aa12.16□□□□□ -0.46
COMMD4-216ENST00000567023 NME4O00746 187 aa12.16□□□□□ -0.46
COMMD4-216ENST00000567023 TFP02787 698 aa12.16□□□□□ -0.46
COMMD4-216ENST00000567023 CST2P09228 141 aa12.16□□□□□ -0.46
COMMD4-216ENST00000567023 SAGP10523 405 aaPredicted RBP12.16□□□□□ -0.46
COMMD4-216ENST00000567023 PCMT1P22061 227 aa12.16□□□□□ -0.46
COMMD4-216ENST00000567023 CRYBB2P43320 205 aa12.16□□□□□ -0.46
COMMD4-216ENST00000567023 MAGEB1P43366 347 aa12.16□□□□□ -0.46
COMMD4-216ENST00000567023 YAP1P46937 504 aaKnown RBP12.16□□□□□ -0.46
COMMD4-216ENST00000567023 NUDT2P50583 147 aa12.16□□□□□ -0.46
COMMD4-216ENST00000567023 PSG4Q00888 419 aa12.16□□□□□ -0.46
COMMD4-216ENST00000567023 CCNIQ14094 377 aa12.16□□□□□ -0.46
COMMD4-216ENST00000567023 SGCAQ16586 387 aa12.16□□□□□ -0.46
COMMD4-216ENST00000567023 ALKBH6Q3KRA9 238 aa12.16□□□□□ -0.46
COMMD4-216ENST00000567023 TMEM154Q6P9G4 183 aa12.16□□□□□ -0.46
COMMD4-216ENST00000567023 UNQ6126/PRO20091Q6UXV3 157 aa12.16□□□□□ -0.46
COMMD4-216ENST00000567023 TMPRSS11FQ6ZWK6 438 aa12.16□□□□□ -0.46
COMMD4-216ENST00000567023 SYT9Q86SS6 491 aa12.16□□□□□ -0.46
COMMD4-216ENST00000567023 OAFQ86UD1 273 aa12.16□□□□□ -0.46
COMMD4-216ENST00000567023 NRMQ8IXM6 262 aa12.16□□□□□ -0.46
COMMD4-216ENST00000567023 OR1J1Q8NGS3 322 aa12.16□□□□□ -0.46
COMMD4-216ENST00000567023 CLDND2Q8NHS1 167 aa12.16□□□□□ -0.46
COMMD4-216ENST00000567023 SNX33Q8WV41 574 aa12.16□□□□□ -0.46
COMMD4-216ENST00000567023 NSMAFQ92636 917 aa12.16□□□□□ -0.46
COMMD4-216ENST00000567023 OR51B6Q9H340 312 aa12.16□□□□□ -0.46
COMMD4-216ENST00000567023 GMPR2Q9P2T1 348 aaKnown RBP12.16□□□□□ -0.46
COMMD4-216ENST00000567023 ABCD2Q9UBJ2 740 aa12.16□□□□□ -0.46
COMMD4-216ENST00000567023 A6NIZ1 184 aa12.15□□□□□ -0.46
COMMD4-216ENST00000567023 NDUFAB1O14561 156 aa12.15□□□□□ -0.46
COMMD4-216ENST00000567023 WNT9BO14905 357 aa12.15□□□□□ -0.46
COMMD4-216ENST00000567023 MT-ND5P03915 603 aa12.15□□□□□ -0.46
COMMD4-216ENST00000567023 LAP3P28838 519 aa12.15□□□□□ -0.46
COMMD4-216ENST00000567023 WNT5AP41221 380 aa12.15□□□□□ -0.46
COMMD4-216ENST00000567023 GUCA1AP43080 201 aaPredicted RBP12.15□□□□□ -0.46
COMMD4-216ENST00000567023 SLC7A2P52569 658 aa12.15□□□□□ -0.46
COMMD4-216ENST00000567023 RAP1BP61224 184 aa12.15□□□□□ -0.46
COMMD4-216ENST00000567023 PCBD1P61457 104 aa12.15□□□□□ -0.46
COMMD4-216ENST00000567023 LMO4P61968 165 aa12.15□□□□□ -0.46
COMMD4-216ENST00000567023 RAP1AP62834 184 aa12.15□□□□□ -0.46
COMMD4-216ENST00000567023 CCL8P80075 99 aa12.15□□□□□ -0.46
COMMD4-216ENST00000567023 TOP3AQ13472 1001 aaPredicted RBP12.15□□□□□ -0.46
COMMD4-216ENST00000567023 IFI44LQ53G44 452 aa12.15□□□□□ -0.46
COMMD4-216ENST00000567023 MBNL2Q5VZF2 373 aaKnown RBP12.15□□□□□ -0.46
COMMD4-216ENST00000567023 MBOAT2Q6ZWT7 520 aa12.15□□□□□ -0.46
COMMD4-216ENST00000567023 ALDH16A1Q8IZ83 802 aa12.15□□□□□ -0.46
COMMD4-216ENST00000567023 ZNF101Q8IZC7 436 aa12.15□□□□□ -0.46
COMMD4-216ENST00000567023 RFLNBQ8N5W9 214 aa12.15□□□□□ -0.46
COMMD4-216ENST00000567023 CLDN22Q8N7P3 220 aa12.15□□□□□ -0.46
COMMD4-216ENST00000567023 OR51A7Q8NH64 312 aa12.15□□□□□ -0.46
COMMD4-216ENST00000567023 MARS2Q96GW9 593 aaKnown RBP12.15□□□□□ -0.46
COMMD4-216ENST00000567023 WACQ9BTA9 647 aa12.15□□□□□ -0.46
COMMD4-216ENST00000567023 ANKRD19PQ9H560 264 aa12.15□□□□□ -0.46
COMMD4-216ENST00000567023 RHCGQ9UBD6 479 aa12.15□□□□□ -0.46
COMMD4-216ENST00000567023 EIF3KQ9UBQ5 218 aaKnown RBP12.15□□□□□ -0.46
COMMD4-216ENST00000567023 TIMM10BQ9Y5J6 103 aa12.15□□□□□ -0.46
COMMD4-216ENST00000567023 TRAV27A0A087WT01 109 aa12.14□□□□□ -0.47
COMMD4-216ENST00000567023 C5orf49A4QMS7 147 aa12.14□□□□□ -0.47
COMMD4-216ENST00000567023 EFCAB9A8MZ26 197 aa12.14□□□□□ -0.47
COMMD4-216ENST00000567023 H3BSA7 217 aa12.14□□□□□ -0.47
COMMD4-216ENST00000567023 PPIHO43447 177 aaKnown RBP12.14□□□□□ -0.47
COMMD4-216ENST00000567023 AHCYL1O43865 530 aa12.14□□□□□ -0.47
COMMD4-216ENST00000567023 ZNF682O95780 498 aa12.14□□□□□ -0.47
COMMD4-216ENST00000567023 MSMBP08118 114 aa12.14□□□□□ -0.47
COMMD4-216ENST00000567023 GAAP10253 952 aa12.14□□□□□ -0.47
COMMD4-216ENST00000567023 CCNOP22674 350 aa12.14□□□□□ -0.47
COMMD4-216ENST00000567023 GSK3BP49841 420 aa12.14□□□□□ -0.47
COMMD4-216ENST00000567023 GDI2P50395 445 aaKnown RBP12.14□□□□□ -0.47
COMMD4-216ENST00000567023 MMP15P51511 669 aa12.14□□□□□ -0.47
COMMD4-216ENST00000567023 PSME3P61289 254 aa12.14□□□□□ -0.47
COMMD4-216ENST00000567023 ERVK-25P63136 954 aa12.14□□□□□ -0.47
COMMD4-216ENST00000567023 TEKQ02763 1124 aa12.14□□□□□ -0.47
COMMD4-216ENST00000567023 KRT72Q14CN4 511 aa12.14□□□□□ -0.47
COMMD4-216ENST00000567023 ZNF718Q3SXZ3 478 aa12.14□□□□□ -0.47
COMMD4-216ENST00000567023 FAM209AQ5JX71 171 aa12.14□□□□□ -0.47
COMMD4-216ENST00000567023 ZNF730Q6ZMV8 503 aa12.14□□□□□ -0.47
COMMD4-216ENST00000567023 TSEN54Q7Z6J9 526 aaKnown RBP12.14□□□□□ -0.47
COMMD4-216ENST00000567023 IGFN1Q86VF2 1251 aa12.14□□□□□ -0.47
COMMD4-216ENST00000567023 AKR7LQ8NHP1 331 aa12.14□□□□□ -0.47
COMMD4-216ENST00000567023 TMEM186Q96B77 213 aa12.14□□□□□ -0.47
COMMD4-216ENST00000567023 OR2H1Q9GZK4 316 aa12.14□□□□□ -0.47
COMMD4-216ENST00000567023 WNT5BQ9H1J7 359 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms