RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 DUS3LQ96G46 650 aaKnown RBP3.55□□□□□ -1.84
CNOT1-209ENST00000566240 XPO6Q96QU8 1125 aaKnown RBP3.55□□□□□ -1.84
CNOT1-209ENST00000566240 SH3GL3Q99963 347 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 UGT1A7Q9HAW7 530 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 UGT1A8Q9HAW9 530 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 FANCEQ9HB96 536 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 IL17CQ9P0M4 197 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 PEF1Q9UBV8 284 aaKnown RBP3.55□□□□□ -1.84
CNOT1-209ENST00000566240 LGALS13Q9UHV8 139 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 CHTOPQ9Y3Y2 248 aaKnown RBP3.55□□□□□ -1.84
CNOT1-209ENST00000566240 E9PCH4 1651 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 RIMBP3CA6NJZ7 1639 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 RIMBP3BA6NNM3 1639 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 TRPM1Q7Z4N2 1603 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 RIMBP3Q9UFD9 1639 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 KDM5CP41229 1560 aa3.55□□□□□ -1.84
CNOT1-209ENST00000566240 RALGAPBQ86X10 1494 aa3.54□□□□□ -1.84
CNOT1-209ENST00000566240 EIF3AQ14152 1382 aaKnown RBP3.54□□□□□ -1.84
CNOT1-209ENST00000566240 KCNE1BA0A087WTH5 132 aa3.54□□□□□ -1.84
CNOT1-209ENST00000566240 ZNF816-ZNF321PA0A0X1KG74 233 aa3.54□□□□□ -1.84
CNOT1-209ENST00000566240 F6UB75 175 aa3.54□□□□□ -1.84
CNOT1-209ENST00000566240 EMC8O43402 210 aa3.54□□□□□ -1.84
CNOT1-209ENST00000566240 NPIPB7O75200 414 aa3.54□□□□□ -1.84
CNOT1-209ENST00000566240 FGFR1OPO95684 399 aaKnown RBP3.54□□□□□ -1.84
CNOT1-209ENST00000566240 ACSM4P0C7M7 580 aa3.54□□□□□ -1.84
CNOT1-209ENST00000566240 TDGF1P13385 188 aa3.54□□□□□ -1.84
CNOT1-209ENST00000566240 SERPINB5P36952 375 aa3.54□□□□□ -1.84
CNOT1-209ENST00000566240 SLC11A1P49279 550 aa3.54□□□□□ -1.84
CNOT1-209ENST00000566240 TAF6P49848 677 aa3.54□□□□□ -1.84
CNOT1-209ENST00000566240 CCR8P51685 355 aa3.54□□□□□ -1.84
CNOT1-209ENST00000566240 TDGF1P3P51864 188 aa3.54□□□□□ -1.84
CNOT1-209ENST00000566240 CRISP1P54107 249 aa3.54□□□□□ -1.84
CNOT1-209ENST00000566240 NUP107P57740 925 aa3.54□□□□□ -1.84
CNOT1-209ENST00000566240 EIF3EP60228 445 aaKnown RBP3.54□□□□□ -1.84
CNOT1-209ENST00000566240 SF3A2Q15428 464 aaKnown RBP3.54□□□□□ -1.84
CNOT1-209ENST00000566240 IL17AQ16552 155 aa3.54□□□□□ -1.84
CNOT1-209ENST00000566240 ZNF630Q2M218 657 aaPredicted RBP3.54□□□□□ -1.84
CNOT1-209ENST00000566240 HIKESHIQ53FT3 197 aa3.54□□□□□ -1.84
CNOT1-209ENST00000566240 LRRC10Q5BKY1 277 aa3.54□□□□□ -1.84
CNOT1-209ENST00000566240 FHL5Q5TD97 284 aa3.54□□□□□ -1.84
CNOT1-209ENST00000566240 AGBL2Q5U5Z8 902 aa3.54□□□□□ -1.84
CNOT1-209ENST00000566240 FBXL22Q6P050 247 aa3.54□□□□□ -1.84
CNOT1-209ENST00000566240 CMC1Q7Z7K0 106 aa3.54□□□□□ -1.84
CNOT1-209ENST00000566240 TTC29Q8NA56 475 aaPredicted RBP3.54□□□□□ -1.84
CNOT1-209ENST00000566240 OR4F15Q8NGB8 312 aa3.54□□□□□ -1.84
CNOT1-209ENST00000566240 OR10G9Q8NGN4 311 aa3.54□□□□□ -1.84
CNOT1-209ENST00000566240 OR9G4Q8NGQ1 327 aa3.54□□□□□ -1.84
CNOT1-209ENST00000566240 LINC01006Q8NI28 216 aa3.54□□□□□ -1.84
CNOT1-209ENST00000566240 GPX8Q8TED1 209 aa3.54□□□□□ -1.84
CNOT1-209ENST00000566240 OSBPL10Q9BXB5 764 aa3.54□□□□□ -1.84
CNOT1-209ENST00000566240 YTHDF1Q9BYJ9 559 aaKnown RBP3.54□□□□□ -1.84
CNOT1-209ENST00000566240 EML4Q9HC35 981 aaKnown RBP3.54□□□□□ -1.84
CNOT1-209ENST00000566240 CHRAC1Q9NRG0 131 aa3.54□□□□□ -1.84
CNOT1-209ENST00000566240 MTCH1Q9NZJ7 389 aa3.54□□□□□ -1.84
CNOT1-209ENST00000566240 CCDC59Q9P031 241 aaKnown RBP3.54□□□□□ -1.84
CNOT1-209ENST00000566240 CAMSAP1Q5T5Y3 1602 aa3.54□□□□□ -1.84
CNOT1-209ENST00000566240 GLI2P10070 1586 aa3.54□□□□□ -1.84
CNOT1-209ENST00000566240 EFCAB6Q5THR3 1501 aa3.54□□□□□ -1.84
CNOT1-209ENST00000566240 TSPOAP1O95153 1857 aa3.54□□□□□ -1.84
CNOT1-209ENST00000566240 CD109Q6YHK3 1445 aa3.53□□□□□ -1.84
CNOT1-209ENST00000566240 CNTLNQ9NXG0 1405 aa3.53□□□□□ -1.84
CNOT1-209ENST00000566240 KIDINS220Q9ULH0 1771 aa3.53□□□□□ -1.84
CNOT1-209ENST00000566240 RICTORQ6R327 1708 aa3.53□□□□□ -1.84
CNOT1-209ENST00000566240 ROCK2O75116 1388 aaKnown RBP3.53□□□□□ -1.84
CNOT1-209ENST00000566240 ABCA6Q8N139 1617 aa3.53□□□□□ -1.84
CNOT1-209ENST00000566240 ARPC4-TTLL3A0A0A6YYG9 625 aa3.53□□□□□ -1.84
CNOT1-209ENST00000566240 A0A0B4J2A0 478 aa3.53□□□□□ -1.84
CNOT1-209ENST00000566240 GJE1A6NN92 205 aa3.53□□□□□ -1.84
CNOT1-209ENST00000566240 AIREO43918 545 aa3.53□□□□□ -1.84
CNOT1-209ENST00000566240 KLF8O95600 359 aaPredicted RBP3.53□□□□□ -1.84
CNOT1-209ENST00000566240 SLC1A2P43004 574 aa3.53□□□□□ -1.84
CNOT1-209ENST00000566240 FGF8P55075 233 aaPredicted RBP3.53□□□□□ -1.84
CNOT1-209ENST00000566240 RPS21P63220 83 aaKnown RBP3.53□□□□□ -1.84
CNOT1-209ENST00000566240 REG3AQ06141 175 aa3.53□□□□□ -1.84
CNOT1-209ENST00000566240 TWF1Q12792 350 aa3.53□□□□□ -1.84
CNOT1-209ENST00000566240 CLINT1Q14677 625 aa3.53□□□□□ -1.84
CNOT1-209ENST00000566240 OR52W1Q6IF63 320 aa3.53□□□□□ -1.84
CNOT1-209ENST00000566240 C6orf89Q6UWU4 347 aa3.53□□□□□ -1.84
CNOT1-209ENST00000566240 OR52K1Q8NGK4 314 aa3.53□□□□□ -1.84
CNOT1-209ENST00000566240 OR10R2Q8NGX6 335 aa3.53□□□□□ -1.84
CNOT1-209ENST00000566240 ACER1Q8TDN7 264 aa3.53□□□□□ -1.84
CNOT1-209ENST00000566240 GEMIN6Q8WXD5 167 aaKnown RBP3.53□□□□□ -1.84
CNOT1-209ENST00000566240 ECHDC3Q96DC8 303 aa3.53□□□□□ -1.84
CNOT1-209ENST00000566240 OR5B12Q96R08 314 aa3.53□□□□□ -1.84
CNOT1-209ENST00000566240 ACTR3CQ9C0K3 210 aaPredicted RBP3.53□□□□□ -1.84
CNOT1-209ENST00000566240 BLZF1Q9H2G9 400 aa3.53□□□□□ -1.84
CNOT1-209ENST00000566240 CLSTN2Q9H4D0 955 aa3.53□□□□□ -1.84
CNOT1-209ENST00000566240 CLMPQ9H6B4 373 aa3.53□□□□□ -1.84
CNOT1-209ENST00000566240 RPF2Q9H7B2 306 aaKnown RBP3.53□□□□□ -1.84
CNOT1-209ENST00000566240 PXMP2Q9NR77 195 aa3.53□□□□□ -1.84
CNOT1-209ENST00000566240 SHPKQ9UHJ6 478 aa3.53□□□□□ -1.84
CNOT1-209ENST00000566240 NEURL4Q96JN8 1562 aa3.53□□□□□ -1.84
CNOT1-209ENST00000566240 DENND4BO75064 1496 aaPredicted RBP3.53□□□□□ -1.84
CNOT1-209ENST00000566240 A2MP01023 1474 aa3.53□□□□□ -1.84
CNOT1-209ENST00000566240 COL2A1P02458 1487 aaPredicted RBP3.53□□□□□ -1.84
CNOT1-209ENST00000566240 ARHGAP23Q9P227 1491 aa3.53□□□□□ -1.84
CNOT1-209ENST00000566240 SCAPERQ9BY12 1400 aa3.53□□□□□ -1.85
CNOT1-209ENST00000566240 KDM5AP29375 1690 aaKnown RBP3.52□□□□□ -1.85
CNOT1-209ENST00000566240 MADDQ8WXG6 1647 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 DIP2BQ9P265 1576 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 169.1 ms