RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 LRRC18Q8N456 261 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 C17orf78Q8N4C9 275 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 SLC22A24Q8N4F4 322 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 ZNF511Q8NB15 262 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 OR51G2Q8NGK0 314 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 OR1K1Q8NGR3 316 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 OR2AJ1Q8NGZ0 328 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 FBLIM1Q8WUP2 373 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 APH1BQ8WW43 257 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 RNASE6Q93091 150 aaKnown RBP6.84□□□□□ -1.31
CDH1-208ENST00000565810 ZNF837Q96EG3 531 aaPredicted RBP6.84□□□□□ -1.31
CDH1-208ENST00000565810 RNFT2Q96EX2 444 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 FOXN4Q96NZ1 517 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 INTS14Q96SY0 518 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 CNN2Q99439 309 aaKnown RBP6.84□□□□□ -1.31
CDH1-208ENST00000565810 MNTQ99583 582 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 OR10A4Q9H209 315 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 RNF121Q9H920 327 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 AMBNQ9NP70 447 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 OBP2BQ9NPH6 170 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 CHCHD3Q9NX63 227 aaKnown RBP6.84□□□□□ -1.31
CDH1-208ENST00000565810 KCNG2Q9UJ96 466 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 LRCH1Q9Y2L9 728 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 TPRKBQ9Y3C4 175 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 UGT2A1Q9Y4X1 527 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 TMEM14AQ9Y6G1 99 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 ZFYVE26Q68DK2 2539 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 GTF3C1Q12789 2109 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 CCDC182A6NF36 153 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 EFCAB10A6NFE3 127 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 PYCARD-AS1I3L0S3 204 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 SEC14L2O76054 403 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 UBL3O95164 117 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 MPZL1O95297 269 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 FADS2O95864 444 aaKnown RBP6.83□□□□□ -1.32
CDH1-208ENST00000565810 GPANK1O95872 356 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 WNT11O96014 354 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 TFP02787 698 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 MRPL3P09001 348 aaKnown RBP6.83□□□□□ -1.32
CDH1-208ENST00000565810 CST2P09228 141 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 SPARCP09486 303 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 SBK2P0C263 348 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 CCDC159P0C7I6 412 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 GAAP10253 952 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 DBTP11182 482 aaKnown RBP6.83□□□□□ -1.32
CDH1-208ENST00000565810 CD79AP11912 226 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 PLA2G2AP14555 144 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 PPP3CBP16298 524 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 ARR3P36575 388 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 PEX19P40855 299 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 NUDT6P53370 316 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 FOXG1P55316 489 aaPredicted RBP6.83□□□□□ -1.32
CDH1-208ENST00000565810 ACTC1P68032 377 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 ACTA1P68133 377 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 ZNF91Q05481 1191 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 SCRN3Q0VDG4 424 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 RAB40BQ12829 278 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 GGTLC2Q14390 218 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 GABRA6Q16445 453 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 KCNMB1Q16558 191 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 TBRG1Q3YBR2 411 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 TEX30Q5JUR7 227 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 RBM48Q5RL73 367 aaKnown RBP6.83□□□□□ -1.32
CDH1-208ENST00000565810 TIMM23BQ5SRD1 257 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 C1QTNF12Q5T7M4 302 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 SLC18B1Q6NT16 456 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 TMEM53Q6P2H8 277 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 B3GLCTQ6Y288 498 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 STAC2Q6ZMT1 411 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 SLC16A9Q7RTY1 509 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 SYT9Q86SS6 491 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 P2RY8Q86VZ1 359 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 TIGD4Q8IY51 512 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 ALDH16A1Q8IZ83 802 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 STX19Q8N4C7 294 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 ZNF454Q8N9F8 522 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 ZNF540Q8NDQ6 660 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 GJC3Q8NFK1 279 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 SLC26A10Q8NG04 563 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 OR6N2Q8NGY6 317 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 ZNRF4Q8WWF5 429 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 IPCEF1Q8WWN9 437 aaPredicted RBP6.83□□□□□ -1.32
CDH1-208ENST00000565810 ITLN2Q8WWU7 325 aaPredicted RBP6.83□□□□□ -1.32
CDH1-208ENST00000565810 HSD17B8Q92506 261 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 BCL2L2Q92843 193 aaPredicted RBP6.83□□□□□ -1.32
CDH1-208ENST00000565810 MUCL1Q96DR8 90 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 MRPL48Q96GC5 212 aaKnown RBP6.83□□□□□ -1.32
CDH1-208ENST00000565810 YTHDF1Q9BYJ9 559 aaKnown RBP6.83□□□□□ -1.32
CDH1-208ENST00000565810 YIPF3Q9GZM5 350 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 ACTR6Q9GZN1 396 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 C1orf198Q9H425 327 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 MOV10Q9HCE1 1003 aaKnown RBP6.83□□□□□ -1.32
CDH1-208ENST00000565810 EMC7Q9NPA0 242 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 CCNB1IP1Q9NPC3 277 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 PLCXD1Q9NUJ7 323 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 MRPL22Q9NWU5 206 aaKnown RBP6.83□□□□□ -1.32
CDH1-208ENST00000565810 CNOT2Q9NZN8 540 aaKnown RBP6.83□□□□□ -1.32
CDH1-208ENST00000565810 NDRG3Q9UGV2 375 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 LAMP5Q9UJQ1 280 aa6.83□□□□□ -1.32
CDH1-208ENST00000565810 AMDHD2Q9Y303 409 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms