RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 NOSIPQ9Y314 301 aaKnown RBP16.89■□□□□ 0.29
CSPG4P13-201ENST00000565545 A0A1W2PQL4 384 aaPredicted RBP16.88■□□□□ 0.29
CSPG4P13-201ENST00000565545 TVP23AA6NH52 213 aa16.88■□□□□ 0.29
CSPG4P13-201ENST00000565545 MRPL33O75394 65 aaKnown RBP16.88■□□□□ 0.29
CSPG4P13-201ENST00000565545 AQP8O94778 261 aa16.88■□□□□ 0.29
CSPG4P13-201ENST00000565545 GAAP10253 952 aa16.88■□□□□ 0.29
CSPG4P13-201ENST00000565545 ZNF823P16415 610 aa16.88■□□□□ 0.29
CSPG4P13-201ENST00000565545 SELENOPP49908 381 aa16.88■□□□□ 0.29
CSPG4P13-201ENST00000565545 ENTPD1P49961 510 aa16.88■□□□□ 0.29
CSPG4P13-201ENST00000565545 BDH1Q02338 343 aa16.88■□□□□ 0.29
CSPG4P13-201ENST00000565545 KCNMB1Q16558 191 aa16.88■□□□□ 0.29
CSPG4P13-201ENST00000565545 ARMCX4Q5H9R4 360 aa16.88■□□□□ 0.29
CSPG4P13-201ENST00000565545 LRFN4Q6PJG9 635 aa16.88■□□□□ 0.29
CSPG4P13-201ENST00000565545 ZNF322Q6U7Q0 402 aaPredicted RBP16.88■□□□□ 0.29
CSPG4P13-201ENST00000565545 ZNF485Q8NCK3 441 aa16.88■□□□□ 0.29
CSPG4P13-201ENST00000565545 ZNF420Q8TAQ5 688 aaPredicted RBP16.88■□□□□ 0.29
CSPG4P13-201ENST00000565545 TBX5Q99593 518 aa16.88■□□□□ 0.29
CSPG4P13-201ENST00000565545 RBM38Q9H0Z9 239 aaKnown RBP16.88■□□□□ 0.29
CSPG4P13-201ENST00000565545 MRPL22Q9NWU5 206 aaKnown RBP16.88■□□□□ 0.29
CSPG4P13-201ENST00000565545 CLCF1Q9UBD9 225 aa16.88■□□□□ 0.29
CSPG4P13-201ENST00000565545 CEPT1Q9Y6K0 416 aa16.88■□□□□ 0.29
CSPG4P13-201ENST00000565545 CENPEQ02224 2701 aa16.88■□□□□ 0.29
CSPG4P13-201ENST00000565545 HIVEP3Q5T1R4 2406 aa16.87■□□□□ 0.29
CSPG4P13-201ENST00000565545 SPENQ96T58 3664 aaKnown RBP16.87■□□□□ 0.29
CSPG4P13-201ENST00000565545 IGKV1D-43A0A0B4J1Z2 117 aa16.87■□□□□ 0.29
CSPG4P13-201ENST00000565545 H3BSA7 217 aa16.87■□□□□ 0.29
CSPG4P13-201ENST00000565545 ZNF701M0R085 212 aaPredicted RBP16.87■□□□□ 0.29
CSPG4P13-201ENST00000565545 ZNF593O00488 134 aaPredicted RBP16.87■□□□□ 0.29
CSPG4P13-201ENST00000565545 TMCC2O75069 709 aa16.87■□□□□ 0.29
CSPG4P13-201ENST00000565545 MT-ND5P03915 603 aa16.87■□□□□ 0.29
CSPG4P13-201ENST00000565545 SCG5P05408 212 aa16.87■□□□□ 0.29
CSPG4P13-201ENST00000565545 PTGER4P35408 488 aa16.87■□□□□ 0.29
CSPG4P13-201ENST00000565545 GUCA1AP43080 201 aaPredicted RBP16.87■□□□□ 0.29
CSPG4P13-201ENST00000565545 STK11Q15831 433 aa16.87■□□□□ 0.29
CSPG4P13-201ENST00000565545 PCK2Q16822 640 aa16.87■□□□□ 0.29
CSPG4P13-201ENST00000565545 CDONQ4KMG0 1287 aa16.87■□□□□ 0.29
CSPG4P13-201ENST00000565545 RIPPLY2Q5TAB7 128 aa16.87■□□□□ 0.29
CSPG4P13-201ENST00000565545 OR2G6Q5TZ20 316 aa16.87■□□□□ 0.29
CSPG4P13-201ENST00000565545 LYPD4Q6UWN0 246 aa16.87■□□□□ 0.29
CSPG4P13-201ENST00000565545 PLEKHG7Q6ZR37 379 aa16.87■□□□□ 0.29
CSPG4P13-201ENST00000565545 P4HA3Q7Z4N8 544 aa16.87■□□□□ 0.29
CSPG4P13-201ENST00000565545 KCTD20Q7Z5Y7 419 aa16.87■□□□□ 0.29
CSPG4P13-201ENST00000565545 CLVS1Q8IUQ0 354 aaPredicted RBP16.87■□□□□ 0.29
CSPG4P13-201ENST00000565545 GPR137CQ8N3F9 429 aa16.87■□□□□ 0.29
CSPG4P13-201ENST00000565545 OR10H5Q8NGA6 315 aa16.87■□□□□ 0.29
CSPG4P13-201ENST00000565545 OR6N2Q8NGY6 317 aa16.87■□□□□ 0.29
CSPG4P13-201ENST00000565545 OTOSQ8NHW6 89 aa16.87■□□□□ 0.29
CSPG4P13-201ENST00000565545 HAVCR2Q8TDQ0 301 aa16.87■□□□□ 0.29
CSPG4P13-201ENST00000565545 ASB17Q8WXJ9 295 aa16.87■□□□□ 0.29
CSPG4P13-201ENST00000565545 NSMAFQ92636 917 aa16.87■□□□□ 0.29
CSPG4P13-201ENST00000565545 YIPF6Q96EC8 236 aa16.87■□□□□ 0.29
CSPG4P13-201ENST00000565545 LINC00470Q9BZP3 86 aa16.87■□□□□ 0.29
CSPG4P13-201ENST00000565545 CALHM2Q9HA72 323 aa16.87■□□□□ 0.29
CSPG4P13-201ENST00000565545 LAMP5Q9UJQ1 280 aa16.87■□□□□ 0.29
CSPG4P13-201ENST00000565545 PRRC2CQ9Y520 2896 aaKnown RBP16.87■□□□□ 0.29
CSPG4P13-201ENST00000565545 ITPR2Q14571 2701 aa16.87■□□□□ 0.29
CSPG4P13-201ENST00000565545 DOPEY1Q5JWR5 2465 aa16.87■□□□□ 0.29
CSPG4P13-201ENST00000565545 DHHO43323 396 aa16.86■□□□□ 0.29
CSPG4P13-201ENST00000565545 HSMCR30P0CW71 290 aa16.86■□□□□ 0.29
CSPG4P13-201ENST00000565545 ALOX5APP20292 161 aa16.86■□□□□ 0.29
CSPG4P13-201ENST00000565545 ZNF84P51523 738 aa16.86■□□□□ 0.29
CSPG4P13-201ENST00000565545 TMBIM6P55061 237 aa16.86■□□□□ 0.29
CSPG4P13-201ENST00000565545 ADAM8P78325 824 aa16.86■□□□□ 0.29
CSPG4P13-201ENST00000565545 EGR3Q06889 387 aa16.86■□□□□ 0.29
CSPG4P13-201ENST00000565545 MRPL28Q13084 256 aaKnown RBP16.86■□□□□ 0.29
CSPG4P13-201ENST00000565545 SLC18B1Q6NT16 456 aa16.86■□□□□ 0.29
CSPG4P13-201ENST00000565545 FOXL2NBQ6ZUU3 175 aa16.86■□□□□ 0.29
CSPG4P13-201ENST00000565545 DPY19L4Q7Z388 723 aa16.86■□□□□ 0.29
CSPG4P13-201ENST00000565545 TUSC5Q8IXB3 177 aa16.86■□□□□ 0.29
CSPG4P13-201ENST00000565545 SNX33Q8WV41 574 aa16.86■□□□□ 0.29
CSPG4P13-201ENST00000565545 SPRYD4Q8WW59 207 aaPredicted RBP16.86■□□□□ 0.29
CSPG4P13-201ENST00000565545 GATAD2BQ8WXI9 593 aa16.86■□□□□ 0.29
CSPG4P13-201ENST00000565545 WNT2BQ93097 391 aa16.86■□□□□ 0.29
CSPG4P13-201ENST00000565545 ZNF775Q96BV0 537 aaPredicted RBP16.86■□□□□ 0.29
CSPG4P13-201ENST00000565545 GMPPAQ96IJ6 420 aaPredicted RBP16.86■□□□□ 0.29
CSPG4P13-201ENST00000565545 OPALINQ96PE5 141 aa16.86■□□□□ 0.29
CSPG4P13-201ENST00000565545 BCL7BQ9BQE9 202 aa16.86■□□□□ 0.29
CSPG4P13-201ENST00000565545 ULBP2Q9BZM5 246 aa16.86■□□□□ 0.29
CSPG4P13-201ENST00000565545 BABAM2Q9NXR7 383 aa16.86■□□□□ 0.29
CSPG4P13-201ENST00000565545 A0A1W2PPL8 197 aa16.85■□□□□ 0.29
CSPG4P13-201ENST00000565545 CCDC160A6NGH7 325 aa16.85■□□□□ 0.29
CSPG4P13-201ENST00000565545 HSPB2A8KAH6 182 aa16.85■□□□□ 0.29
CSPG4P13-201ENST00000565545 CCRL2O00421 344 aa16.85■□□□□ 0.29
CSPG4P13-201ENST00000565545 NOL3O60936 208 aaKnown RBP16.85■□□□□ 0.29
CSPG4P13-201ENST00000565545 SULT1C4O75897 302 aa16.85■□□□□ 0.29
CSPG4P13-201ENST00000565545 WISP2O76076 250 aa16.85■□□□□ 0.29
CSPG4P13-201ENST00000565545 TGM6O95932 706 aa16.85■□□□□ 0.29
CSPG4P13-201ENST00000565545 HOXD4P09016 255 aaPredicted RBP16.85■□□□□ 0.29
CSPG4P13-201ENST00000565545 TACSTD2P09758 323 aa16.85■□□□□ 0.29
CSPG4P13-201ENST00000565545 GABRA1P14867 456 aa16.85■□□□□ 0.29
CSPG4P13-201ENST00000565545 NTF4P34130 210 aa16.85■□□□□ 0.29
CSPG4P13-201ENST00000565545 RGS6P49758 472 aa16.85■□□□□ 0.29
CSPG4P13-201ENST00000565545 HCCSP53701 268 aa16.85■□□□□ 0.29
CSPG4P13-201ENST00000565545 TAS2R43P59537 309 aa16.85■□□□□ 0.29
CSPG4P13-201ENST00000565545 GPR50Q13585 617 aa16.85■□□□□ 0.29
CSPG4P13-201ENST00000565545 HSPB2Q16082 182 aa16.85■□□□□ 0.29
CSPG4P13-201ENST00000565545 GPR107Q5VW38 600 aa16.85■□□□□ 0.29
CSPG4P13-201ENST00000565545 FOXB2Q5VYV0 432 aa16.85■□□□□ 0.29
CSPG4P13-201ENST00000565545 ANKRD13BQ86YJ7 626 aa16.85■□□□□ 0.29
CSPG4P13-201ENST00000565545 C11orf40Q8WZ69 217 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms