RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 UGT2A1Q9Y4X1 527 aa22.69■■□□□ 1.22
NME3-208ENST00000565379 ARPC4-TTLL3A0A0A6YYG9 625 aa22.68■■□□□ 1.22
NME3-208ENST00000565379 IGKV1D-43A0A0B4J1Z2 117 aa22.68■■□□□ 1.22
NME3-208ENST00000565379 SH3D21A4FU49 640 aa22.68■■□□□ 1.22
NME3-208ENST00000565379 PRR23D1E9PI22 279 aaPredicted RBP22.68■■□□□ 1.22
NME3-208ENST00000565379 E9PQ18 207 aa22.68■■□□□ 1.22
NME3-208ENST00000565379 WNT11O96014 354 aa22.68■■□□□ 1.22
NME3-208ENST00000565379 PRR23D2P0DMB1 279 aaPredicted RBP22.68■■□□□ 1.22
NME3-208ENST00000565379 CD99P14209 185 aa22.68■■□□□ 1.22
NME3-208ENST00000565379 LAP3P28838 519 aa22.68■■□□□ 1.22
NME3-208ENST00000565379 UBE2NP61088 152 aaKnown RBP22.68■■□□□ 1.22
NME3-208ENST00000565379 GLO1Q04760 184 aa22.68■■□□□ 1.22
NME3-208ENST00000565379 TSC22D1Q15714 1073 aa22.68■■□□□ 1.22
NME3-208ENST00000565379 SLC22A24Q8N4F4 322 aa22.68■■□□□ 1.22
NME3-208ENST00000565379 CYB561A3Q8NBI2 242 aa22.68■■□□□ 1.22
NME3-208ENST00000565379 NANOS1Q8WY41 292 aaKnown RBP22.68■■□□□ 1.22
NME3-208ENST00000565379 MBOAT4Q96T53 435 aa22.68■■□□□ 1.22
NME3-208ENST00000565379 WACQ9BTA9 647 aa22.68■■□□□ 1.22
NME3-208ENST00000565379 MED18Q9BUE0 208 aa22.68■■□□□ 1.22
NME3-208ENST00000565379 CXXC4Q9H2H0 198 aa22.68■■□□□ 1.22
NME3-208ENST00000565379 SRA1Q9HD15 236 aaKnown RBP22.68■■□□□ 1.22
NME3-208ENST00000565379 NDRG4Q9ULP0 352 aaKnown RBP22.68■■□□□ 1.22
NME3-208ENST00000565379 MOKQ9UQ07 419 aa22.68■■□□□ 1.22
NME3-208ENST00000565379 SLC16A6O15403 523 aa22.67■■□□□ 1.22
NME3-208ENST00000565379 B4GALT1P15291 398 aa22.67■■□□□ 1.22
NME3-208ENST00000565379 GGT2P36268 569 aa22.67■■□□□ 1.22
NME3-208ENST00000565379 TTC23Q5W5X9 447 aa22.67■■□□□ 1.22
NME3-208ENST00000565379 PITX2Q99697 317 aa22.67■■□□□ 1.22
NME3-208ENST00000565379 RASSF4Q9H2L5 321 aa22.67■■□□□ 1.22
NME3-208ENST00000565379 KCNN2Q9H2S1 579 aa22.67■■□□□ 1.22
NME3-208ENST00000565379 NELFAQ9H3P2 528 aa22.67■■□□□ 1.22
NME3-208ENST00000565379 SEC61A2Q9H9S3 476 aa22.67■■□□□ 1.22
NME3-208ENST00000565379 FAM118AQ9NWS6 357 aa22.67■■□□□ 1.22
NME3-208ENST00000565379 ZNF226Q9NYT6 803 aa22.67■■□□□ 1.22
NME3-208ENST00000565379 GMPPBQ9Y5P6 360 aa22.67■■□□□ 1.22
NME3-208ENST00000565379 IGLV1-36A0A0B4J1U3 117 aa22.66■■□□□ 1.22
NME3-208ENST00000565379 A0A1W2PPL8 197 aa22.66■■□□□ 1.22
NME3-208ENST00000565379 SIAH2O43255 324 aa22.66■■□□□ 1.22
NME3-208ENST00000565379 HRGP04196 525 aa22.66■■□□□ 1.22
NME3-208ENST00000565379 EFNB1P98172 346 aa22.66■■□□□ 1.22
NME3-208ENST00000565379 KEAP1Q14145 624 aa22.66■■□□□ 1.22
NME3-208ENST00000565379 FAM27BQ5VT28 67 aa22.66■■□□□ 1.22
NME3-208ENST00000565379 FBXW10Q5XX13 1052 aa22.66■■□□□ 1.22
NME3-208ENST00000565379 DEPDC4Q8N2C3 294 aa22.66■■□□□ 1.22
NME3-208ENST00000565379 PROKR2Q8NFJ6 384 aa22.66■■□□□ 1.22
NME3-208ENST00000565379 OR8J1Q8NGP2 316 aa22.66■■□□□ 1.22
NME3-208ENST00000565379 NRG4Q8WWG1 115 aa22.66■■□□□ 1.22
NME3-208ENST00000565379 WFIKKN1Q96NZ8 548 aa22.66■■□□□ 1.22
NME3-208ENST00000565379 RERGLQ9H628 205 aa22.66■■□□□ 1.22
NME3-208ENST00000565379 NGBQ9NPG2 151 aa22.66■■□□□ 1.22
NME3-208ENST00000565379 IMPAD1Q9NX62 359 aa22.66■■□□□ 1.22
NME3-208ENST00000565379 EDARQ9UNE0 448 aa22.66■■□□□ 1.22
NME3-208ENST00000565379 COA3Q9Y2R0 106 aaPredicted RBP22.66■■□□□ 1.22
NME3-208ENST00000565379 PRR14LQ5THK1 2151 aa22.65■■□□□ 1.22
NME3-208ENST00000565379 A0A096LPE4 126 aa22.65■■□□□ 1.22
NME3-208ENST00000565379 LOC100130705A0A1B0GUX0 176 aa22.65■■□□□ 1.22
NME3-208ENST00000565379 A0A1W2PPZ6 126 aa22.65■■□□□ 1.22
NME3-208ENST00000565379 DLGAP1O14490 977 aa22.65■■□□□ 1.22
NME3-208ENST00000565379 MSR1P21757 451 aa22.65■■□□□ 1.22
NME3-208ENST00000565379 PTDSS1P48651 473 aaKnown RBP22.65■■□□□ 1.22
NME3-208ENST00000565379 PPA1Q15181 289 aa22.65■■□□□ 1.22
NME3-208ENST00000565379 ETFDHQ16134 617 aa22.65■■□□□ 1.22
NME3-208ENST00000565379 KCNMB1Q16558 191 aa22.65■■□□□ 1.22
NME3-208ENST00000565379 HIKESHIQ53FT3 197 aa22.65■■□□□ 1.22
NME3-208ENST00000565379 C22orf34Q6ZV56 151 aa22.65■■□□□ 1.22
NME3-208ENST00000565379 DHRSXQ8N5I4 330 aa22.65■■□□□ 1.22
NME3-208ENST00000565379 TMEM163Q8TC26 289 aa22.65■■□□□ 1.22
NME3-208ENST00000565379 PTP4A1Q93096 173 aa22.65■■□□□ 1.22
NME3-208ENST00000565379 TSSK2Q96PF2 358 aa22.65■■□□□ 1.22
NME3-208ENST00000565379 PLEKHF2Q9H8W4 249 aa22.65■■□□□ 1.22
NME3-208ENST00000565379 POLE4Q9NR33 117 aa22.65■■□□□ 1.22
NME3-208ENST00000565379 SLC25A15Q9Y619 301 aa22.65■■□□□ 1.22
NME3-208ENST00000565379 CASKO14936 926 aa22.64■■□□□ 1.21
NME3-208ENST00000565379 PRODHO43272 600 aa22.64■■□□□ 1.21
NME3-208ENST00000565379 TLX2O43763 284 aaPredicted RBP22.64■■□□□ 1.21
NME3-208ENST00000565379 MPZL2O60487 215 aa22.64■■□□□ 1.21
NME3-208ENST00000565379 UBL3O95164 117 aa22.64■■□□□ 1.21
NME3-208ENST00000565379 GOSR1O95249 250 aa22.64■■□□□ 1.21
NME3-208ENST00000565379 SPI1P17947 270 aa22.64■■□□□ 1.21
NME3-208ENST00000565379 LSM6P62312 80 aaKnown RBP22.64■■□□□ 1.21
NME3-208ENST00000565379 HSF2Q03933 536 aa22.64■■□□□ 1.21
NME3-208ENST00000565379 TAB1Q15750 504 aa22.64■■□□□ 1.21
NME3-208ENST00000565379 SGCAQ16586 387 aa22.64■■□□□ 1.21
NME3-208ENST00000565379 SLC36A2Q495M3 483 aa22.64■■□□□ 1.21
NME3-208ENST00000565379 SLC35D3Q5M8T2 416 aa22.64■■□□□ 1.21
NME3-208ENST00000565379 PLBD1Q6P4A8 553 aa22.64■■□□□ 1.21
NME3-208ENST00000565379 CXXC5Q7LFL8 322 aaKnown RBP22.64■■□□□ 1.21
NME3-208ENST00000565379 TGIF2LYQ8IUE0 185 aa22.64■■□□□ 1.21
NME3-208ENST00000565379 CPOQ8IVL8 374 aa22.64■■□□□ 1.21
NME3-208ENST00000565379 FAM169BQ8N8A8 192 aa22.64■■□□□ 1.21
NME3-208ENST00000565379 TCEANCQ8N8B7 351 aa22.64■■□□□ 1.21
NME3-208ENST00000565379 WDR31Q8NA23 367 aa22.64■■□□□ 1.21
NME3-208ENST00000565379 NABP1Q96AH0 204 aa22.64■■□□□ 1.21
NME3-208ENST00000565379 APOL4Q9BPW4 351 aa22.64■■□□□ 1.21
NME3-208ENST00000565379 FBXL3Q9UKT7 428 aa22.64■■□□□ 1.21
NME3-208ENST00000565379 VPS13CQ709C8 3753 aa22.64■■□□□ 1.21
NME3-208ENST00000565379 ROS1P08922 2347 aa22.63■■□□□ 1.21
NME3-208ENST00000565379 H0YAE9 185 aa22.63■■□□□ 1.21
NME3-208ENST00000565379 DCTN6O00399 190 aa22.63■■□□□ 1.21
NME3-208ENST00000565379 PRKYO43930 277 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms