RNA–Protein interactions for RNA: ENST00000565034.1

NIP7-206, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 3

Gene NIP7, Length 639 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-206ENST00000565034 CASKO14936 926 aa13.03□□□□□ -0.32
NIP7-206ENST00000565034 KLK10O43240 276 aa13.03□□□□□ -0.32
NIP7-206ENST00000565034 ARL6IP5O75915 188 aa13.03□□□□□ -0.32
NIP7-206ENST00000565034 ZNF432O94892 652 aa13.03□□□□□ -0.32
NIP7-206ENST00000565034 SYNGR4O95473 234 aa13.03□□□□□ -0.32
NIP7-206ENST00000565034 QDPRP09417 244 aa13.03□□□□□ -0.32
NIP7-206ENST00000565034 PSKH1P11801 424 aa13.03□□□□□ -0.32
NIP7-206ENST00000565034 MYL9P24844 172 aa13.03□□□□□ -0.32
NIP7-206ENST00000565034 S100A5P33763 92 aa13.03□□□□□ -0.32
NIP7-206ENST00000565034 PSMB10P40306 273 aa13.03□□□□□ -0.32
NIP7-206ENST00000565034 OPRL1P41146 370 aa13.03□□□□□ -0.32
NIP7-206ENST00000565034 RIDAP52758 137 aaKnown RBP13.03□□□□□ -0.32
NIP7-206ENST00000565034 ALKBH1Q13686 389 aaKnown RBP13.03□□□□□ -0.32
NIP7-206ENST00000565034 MEP1BQ16820 701 aa13.03□□□□□ -0.32
NIP7-206ENST00000565034 ACSM3Q53FZ2 586 aa13.03□□□□□ -0.32
NIP7-206ENST00000565034 YIF1BQ5BJH7 314 aa13.03□□□□□ -0.32
NIP7-206ENST00000565034 FOXL2NBQ6ZUU3 175 aa13.03□□□□□ -0.32
NIP7-206ENST00000565034 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.03□□□□□ -0.32
NIP7-206ENST00000565034 ZIC4Q8N9L1 334 aa13.03□□□□□ -0.32
NIP7-206ENST00000565034 SNIP1Q8TAD8 396 aaKnown RBP13.03□□□□□ -0.32
NIP7-206ENST00000565034 RNF128Q8TEB7 428 aa13.03□□□□□ -0.32
NIP7-206ENST00000565034 AP3S1Q92572 193 aa13.03□□□□□ -0.32
NIP7-206ENST00000565034 THRSPQ92748 146 aa13.03□□□□□ -0.32
NIP7-206ENST00000565034 ABTB1Q969K4 478 aaPredicted RBP13.03□□□□□ -0.32
NIP7-206ENST00000565034 ZNF385AQ96PM9 386 aaKnown RBP13.03□□□□□ -0.32
NIP7-206ENST00000565034 DCLRE1CQ96SD1 692 aaKnown RBP13.03□□□□□ -0.32
NIP7-206ENST00000565034 SMAD5Q99717 465 aaKnown RBP13.03□□□□□ -0.32
NIP7-206ENST00000565034 AKIP1Q9NQ31 210 aa13.03□□□□□ -0.32
NIP7-206ENST00000565034 ZNF281Q9Y2X9 895 aa13.03□□□□□ -0.32
NIP7-206ENST00000565034 FLVCR1Q9Y5Y0 555 aa13.03□□□□□ -0.32
NIP7-206ENST00000565034 GVINP1Q7Z2Y8 2422 aa13.03□□□□□ -0.32
NIP7-206ENST00000565034 IQCMA0A1B0GVH7 501 aa13.02□□□□□ -0.33
NIP7-206ENST00000565034 PSMD9O00233 223 aa13.02□□□□□ -0.33
NIP7-206ENST00000565034 GPR171O14626 319 aa13.02□□□□□ -0.33
NIP7-206ENST00000565034 EFSO43281 561 aa13.02□□□□□ -0.33
NIP7-206ENST00000565034 SLC43A1O75387 559 aa13.02□□□□□ -0.33
NIP7-206ENST00000565034 MPZL1O95297 269 aa13.02□□□□□ -0.33
NIP7-206ENST00000565034 CFL1P23528 166 aaKnown RBP13.02□□□□□ -0.33
NIP7-206ENST00000565034 SDC2P34741 201 aa13.02□□□□□ -0.33
NIP7-206ENST00000565034 RPS27P42677 84 aaKnown RBP13.02□□□□□ -0.33
NIP7-206ENST00000565034 CCR9P51686 369 aa13.02□□□□□ -0.33
NIP7-206ENST00000565034 BMXP51813 675 aa13.02□□□□□ -0.33
NIP7-206ENST00000565034 RASGEF1BQ0VAM2 473 aa13.02□□□□□ -0.33
NIP7-206ENST00000565034 LRFN4Q6PJG9 635 aa13.02□□□□□ -0.33
NIP7-206ENST00000565034 LRRC69Q6ZNQ3 347 aa13.02□□□□□ -0.33
NIP7-206ENST00000565034 FCRLAQ7L513 359 aa13.02□□□□□ -0.33
NIP7-206ENST00000565034 CEACAM19Q7Z692 300 aa13.02□□□□□ -0.33
NIP7-206ENST00000565034 TPRA1Q86W33 373 aa13.02□□□□□ -0.33
NIP7-206ENST00000565034 C20orf196Q8IYI0 205 aa13.02□□□□□ -0.33
NIP7-206ENST00000565034 ST7LQ8TDW4 575 aa13.02□□□□□ -0.33
NIP7-206ENST00000565034 RNF166Q96A37 237 aaPredicted RBP13.02□□□□□ -0.33
NIP7-206ENST00000565034 TMEM45BQ96B21 275 aa13.02□□□□□ -0.33
NIP7-206ENST00000565034 AMELYQ99218 206 aa13.02□□□□□ -0.33
NIP7-206ENST00000565034 C6orf62Q9GZU0 229 aaPredicted RBP13.02□□□□□ -0.33
NIP7-206ENST00000565034 COMMD4Q9H0A8 199 aa13.02□□□□□ -0.33
NIP7-206ENST00000565034 CCDC86Q9H6F5 360 aaKnown RBP13.02□□□□□ -0.33
NIP7-206ENST00000565034 ZDHHC11Q9H8X9 412 aa13.02□□□□□ -0.33
NIP7-206ENST00000565034 ELOVL3Q9HB03 270 aa13.02□□□□□ -0.33
NIP7-206ENST00000565034 SMURF1Q9HCE7 757 aa13.02□□□□□ -0.33
NIP7-206ENST00000565034 PALMDQ9NP74 551 aa13.02□□□□□ -0.33
NIP7-206ENST00000565034 FOXD3Q9UJU5 478 aaPredicted RBP13.02□□□□□ -0.33
NIP7-206ENST00000565034 ING1Q9UK53 422 aaPredicted RBP13.02□□□□□ -0.33
NIP7-206ENST00000565034 MCTS1Q9ULC4 181 aaKnown RBP13.02□□□□□ -0.33
NIP7-206ENST00000565034 CNOT1A5YKK6 2376 aaKnown RBP13.02□□□□□ -0.33
NIP7-206ENST00000565034 RIF1Q5UIP0 2472 aaKnown RBP13.02□□□□□ -0.33
NIP7-206ENST00000565034 ZFHX2Q9C0A1 2572 aaPredicted RBP13.02□□□□□ -0.33
NIP7-206ENST00000565034 IGKV3D-15A0A087WSY6 115 aa13.01□□□□□ -0.33
NIP7-206ENST00000565034 TRGV5A0A0B4J1U4 118 aa13.01□□□□□ -0.33
NIP7-206ENST00000565034 TMEM212A6NML5 194 aa13.01□□□□□ -0.33
NIP7-206ENST00000565034 RPP14O95059 124 aaKnown RBP13.01□□□□□ -0.33
NIP7-206ENST00000565034 DCTDP32321 178 aa13.01□□□□□ -0.33
NIP7-206ENST00000565034 GUCA1AP43080 201 aaPredicted RBP13.01□□□□□ -0.33
NIP7-206ENST00000565034 ZNF84P51523 738 aa13.01□□□□□ -0.33
NIP7-206ENST00000565034 NANOS3P60323 173 aaKnown RBP13.01□□□□□ -0.33
NIP7-206ENST00000565034 LSM6P62312 80 aaKnown RBP13.01□□□□□ -0.33
NIP7-206ENST00000565034 MXD1Q05195 221 aa13.01□□□□□ -0.33
NIP7-206ENST00000565034 HNRNPA0Q13151 305 aaKnown RBP13.01□□□□□ -0.33
NIP7-206ENST00000565034 ZMAT1Q5H9K5 638 aa13.01□□□□□ -0.33
NIP7-206ENST00000565034 IGFL3Q6UXB1 125 aa13.01□□□□□ -0.33
NIP7-206ENST00000565034 LRRN1Q6UXK5 716 aa13.01□□□□□ -0.33
NIP7-206ENST00000565034 UNQ9370/PRO34162Q6UXP9 181 aa13.01□□□□□ -0.33
NIP7-206ENST00000565034 RHOUQ7L0Q8 258 aa13.01□□□□□ -0.33
NIP7-206ENST00000565034 DCXRQ7Z4W1 244 aa13.01□□□□□ -0.33
NIP7-206ENST00000565034 CROCCP3Q8IVE0 287 aa13.01□□□□□ -0.33
NIP7-206ENST00000565034 ZADH2Q8N4Q0 377 aa13.01□□□□□ -0.33
NIP7-206ENST00000565034 OR2AJ1Q8NGZ0 328 aa13.01□□□□□ -0.33
NIP7-206ENST00000565034 OR2G2Q8NGZ5 317 aa13.01□□□□□ -0.33
NIP7-206ENST00000565034 OR5AK2Q8NH90 309 aa13.01□□□□□ -0.33
NIP7-206ENST00000565034 RNF133Q8WVZ7 376 aa13.01□□□□□ -0.33
NIP7-206ENST00000565034 ROBO4Q8WZ75 1007 aa13.01□□□□□ -0.33
NIP7-206ENST00000565034 C4orf45Q96LM5 186 aa13.01□□□□□ -0.33
NIP7-206ENST00000565034 DCBLD2Q96PD2 775 aa13.01□□□□□ -0.33
NIP7-206ENST00000565034 BARHL1Q9BZE3 327 aa13.01□□□□□ -0.33
NIP7-206ENST00000565034 C1orf198Q9H425 327 aa13.01□□□□□ -0.33
NIP7-206ENST00000565034 SEC61A2Q9H9S3 476 aa13.01□□□□□ -0.33
NIP7-206ENST00000565034 RNF122Q9H9V4 155 aa13.01□□□□□ -0.33
NIP7-206ENST00000565034 B3GAT2Q9NPZ5 323 aa13.01□□□□□ -0.33
NIP7-206ENST00000565034 POLE4Q9NR33 117 aa13.01□□□□□ -0.33
NIP7-206ENST00000565034 EMC3Q9P0I2 261 aa13.01□□□□□ -0.33
NIP7-206ENST00000565034 CYB5R1Q9UHQ9 305 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms