RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 RPL35P42766 123 aaKnown RBP4.27□□□□□ -1.73
CAPN3-212ENST00000564503 FLT3LGP49771 235 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 RAB13P51153 203 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 AKR1D1P51857 326 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 PRMT2P55345 433 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 H2BFSP57053 126 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 ST8SIA6P61647 398 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 ERVK-25P63136 954 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 SRSF4Q08170 494 aaKnown RBP4.27□□□□□ -1.73
CAPN3-212ENST00000564503 OR2F1Q13607 317 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 CSRP2Q16527 193 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 C2orf68Q2NKX9 166 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 HFEQ30201 348 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 ZNF750Q32MQ0 723 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 PCGF3Q3KNV8 242 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 KRTAP15-1Q3LI76 137 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 SPOUT1Q5T280 376 aaKnown RBP4.27□□□□□ -1.73
CAPN3-212ENST00000564503 MRPL2Q5T653 305 aaKnown RBP4.27□□□□□ -1.73
CAPN3-212ENST00000564503 METRNLQ641Q3 311 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 GLT8D1Q68CQ7 371 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 TMEM215Q68D42 235 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 C18orf63Q68DL7 685 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 FCRLBQ6BAA4 426 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 DHRS7BQ6IAN0 325 aaPredicted RBP4.27□□□□□ -1.73
CAPN3-212ENST00000564503 LIN54Q6MZP7 749 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 FAAP20Q6NZ36 180 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 LPCAT3Q6P1A2 487 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 ZCCHC12Q6PEW1 402 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 STAC2Q6ZMT1 411 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 WDR88Q6ZMY6 472 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 OR2W3Q7Z3T1 314 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 FAM220AQ7Z4H9 259 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 ZNF546Q86UE3 836 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 SERPINA12Q8IW75 414 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 DND1Q8IYX4 353 aaKnown RBP4.27□□□□□ -1.73
CAPN3-212ENST00000564503 SLC39A11Q8N1S5 342 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 SVBPQ8N300 66 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 MUC20Q8N307 709 aaPredicted RBP4.27□□□□□ -1.73
CAPN3-212ENST00000564503 OR2L13Q8N349 312 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 ARL14Q8N4G2 192 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 C12orf45Q8N5I9 185 aaPredicted RBP4.27□□□□□ -1.73
CAPN3-212ENST00000564503 CYB561A3Q8NBI2 242 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 MFSD9Q8NBP5 474 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 RELL2Q8NC24 303 aaPredicted RBP4.27□□□□□ -1.73
CAPN3-212ENST00000564503 C7orf57Q8NEG2 295 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 TMEM185AQ8NFB2 350 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 BPIFCQ8NFQ6 507 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 OR1M1Q8NGA1 313 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 OR52E2Q8NGJ4 325 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 OR2L8Q8NGY9 312 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 HMGB4Q8WW32 186 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 THRSPQ92748 146 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 ZMYND19Q96E35 227 aaPredicted RBP4.27□□□□□ -1.73
CAPN3-212ENST00000564503 COX14Q96I36 57 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 NARS2Q96I59 477 aaKnown RBP4.27□□□□□ -1.73
CAPN3-212ENST00000564503 ZNF558Q96NG5 402 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 MYADMQ96S97 322 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 SDF2Q99470 211 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 PDCD1LG2Q9BQ51 273 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 SLC46A2Q9BY10 475 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 TTTY10Q9BZA0 68 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 ALX4Q9H161 411 aaPredicted RBP4.27□□□□□ -1.73
CAPN3-212ENST00000564503 MS4A5Q9H3V2 200 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 EXO5Q9H790 373 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 MRPS30Q9NP92 439 aaKnown RBP4.27□□□□□ -1.73
CAPN3-212ENST00000564503 FANCFQ9NPI8 374 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 SPHK2Q9NRA0 654 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.27□□□□□ -1.73
CAPN3-212ENST00000564503 C20orf141Q9NUB4 165 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 COA4Q9NYJ1 87 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 MBD2Q9UBB5 411 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 CPNE7Q9UBL6 633 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 MRTO4Q9UKD2 239 aaKnown RBP4.27□□□□□ -1.73
CAPN3-212ENST00000564503 C19orf53Q9UNZ5 99 aaPredicted RBP4.27□□□□□ -1.73
CAPN3-212ENST00000564503 ATG4BQ9Y4P1 393 aa4.27□□□□□ -1.73
CAPN3-212ENST00000564503 PCNX3Q9H6A9 2034 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 KIAA1549Q9HCM3 1950 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 A0A0B4J2E0 115 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 TRBV5-5A0A0J9YX44 114 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 A0A1B0GX12 115 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 TMEM218A2RU14 115 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 OR6C74A6NCV1 312 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 TMEM200CA6NKL6 621 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 HSPB2A8KAH6 182 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 C4orf51C9J302 202 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 IMPA2O14732 288 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 PPM1DO15297 605 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 RAD1O60671 282 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 DNAJB6O75190 326 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 RDH16O75452 317 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 ATG12O94817 140 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 GLCEO94923 617 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 SNAPINO95295 136 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 FGF19O95750 216 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 GYPBP06028 91 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 ANXA2P07355 339 aaKnown RBP4.26□□□□□ -1.73
CAPN3-212ENST00000564503 IFI6P09912 130 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 OR4E1P0C645 316 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 GKN3PP0CG01 181 aa4.26□□□□□ -1.73
CAPN3-212ENST00000564503 SFTPCP11686 197 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms