RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 AQP12BA6NM10 295 aa11.57□□□□□ -0.56
CLK3-213ENST00000563842 C12orf71A8MTZ7 269 aa11.57□□□□□ -0.56
CLK3-213ENST00000563842 IDH3BO43837 385 aa11.57□□□□□ -0.56
CLK3-213ENST00000563842 SNAP29O95721 258 aa11.57□□□□□ -0.56
CLK3-213ENST00000563842 TXNDC12O95881 172 aa11.57□□□□□ -0.56
CLK3-213ENST00000563842 MMP7P09237 267 aaPredicted RBP11.57□□□□□ -0.56
CLK3-213ENST00000563842 RAP2AP10114 183 aa11.57□□□□□ -0.56
CLK3-213ENST00000563842 ZNF26P17031 533 aaPredicted RBP11.57□□□□□ -0.56
CLK3-213ENST00000563842 MSR1P21757 451 aa11.57□□□□□ -0.56
CLK3-213ENST00000563842 CRABP1P29762 137 aa11.57□□□□□ -0.56
CLK3-213ENST00000563842 RAD52P43351 418 aa11.57□□□□□ -0.56
CLK3-213ENST00000563842 GSSP48637 474 aa11.57□□□□□ -0.56
CLK3-213ENST00000563842 PPOXP50336 477 aa11.57□□□□□ -0.56
CLK3-213ENST00000563842 SELENOVP59797 346 aa11.57□□□□□ -0.56
CLK3-213ENST00000563842 TNK1Q13470 666 aa11.57□□□□□ -0.56
CLK3-213ENST00000563842 RFX4Q33E94 735 aa11.57□□□□□ -0.56
CLK3-213ENST00000563842 MESTQ5EB52 335 aa11.57□□□□□ -0.56
CLK3-213ENST00000563842 OR2T5Q6IEZ7 315 aa11.57□□□□□ -0.56
CLK3-213ENST00000563842 DNM1P34Q6PK57 102 aa11.57□□□□□ -0.56
CLK3-213ENST00000563842 FOXL2NBQ6ZUU3 175 aa11.57□□□□□ -0.56
CLK3-213ENST00000563842 ZNF584Q8IVC4 421 aa11.57□□□□□ -0.56
CLK3-213ENST00000563842 AQP12AQ8IXF9 295 aa11.57□□□□□ -0.56
CLK3-213ENST00000563842 OR2T29Q8NH02 315 aa11.57□□□□□ -0.56
CLK3-213ENST00000563842 FANK1Q8TC84 345 aa11.57□□□□□ -0.56
CLK3-213ENST00000563842 VRK1Q99986 396 aaPredicted RBP11.57□□□□□ -0.56
CLK3-213ENST00000563842 BTBD10Q9BSF8 475 aa11.57□□□□□ -0.56
CLK3-213ENST00000563842 RAB1BQ9H0U4 201 aa11.57□□□□□ -0.56
CLK3-213ENST00000563842 OR52D1Q9H346 318 aa11.57□□□□□ -0.56
CLK3-213ENST00000563842 REEP1Q9H902 201 aa11.57□□□□□ -0.56
CLK3-213ENST00000563842 TIMM10BQ9Y5J6 103 aa11.57□□□□□ -0.56
CLK3-213ENST00000563842 YLPM1P49750 1951 aaKnown RBP11.57□□□□□ -0.56
CLK3-213ENST00000563842 DNHD1Q96M86 4753 aa11.56□□□□□ -0.56
CLK3-213ENST00000563842 SOCS2O14508 198 aa11.56□□□□□ -0.56
CLK3-213ENST00000563842 ARPC3O15145 178 aa11.56□□□□□ -0.56
CLK3-213ENST00000563842 NDUFS7O75251 213 aa11.56□□□□□ -0.56
CLK3-213ENST00000563842 KHDRBS3O75525 346 aaKnown RBP11.56□□□□□ -0.56
CLK3-213ENST00000563842 DNAJC8O75937 253 aaPredicted RBP11.56□□□□□ -0.56
CLK3-213ENST00000563842 ATP5HO75947 161 aa11.56□□□□□ -0.56
CLK3-213ENST00000563842 CCNB2O95067 398 aa11.56□□□□□ -0.56
CLK3-213ENST00000563842 F12P00748 615 aaPredicted RBP11.56□□□□□ -0.56
CLK3-213ENST00000563842 ZNF32P17041 273 aa11.56□□□□□ -0.56
CLK3-213ENST00000563842 LAP3P28838 519 aa11.56□□□□□ -0.56
CLK3-213ENST00000563842 PCSK6P29122 969 aa11.56□□□□□ -0.56
CLK3-213ENST00000563842 NOS3P29474 1203 aa11.56□□□□□ -0.56
CLK3-213ENST00000563842 PABPC1L2AQ5JQF8 200 aa11.56□□□□□ -0.56
CLK3-213ENST00000563842 PGBD2Q6P3X8 592 aa11.56□□□□□ -0.56
CLK3-213ENST00000563842 PGM2L1Q6PCE3 622 aa11.56□□□□□ -0.56
CLK3-213ENST00000563842 THSD4Q6ZMP0 1018 aa11.56□□□□□ -0.56
CLK3-213ENST00000563842 JAZF1Q86VZ6 243 aa11.56□□□□□ -0.56
CLK3-213ENST00000563842 C1orf174Q8IYL3 243 aa11.56□□□□□ -0.56
CLK3-213ENST00000563842 CLDN22Q8N7P3 220 aa11.56□□□□□ -0.56
CLK3-213ENST00000563842 OR52L1Q8NGH7 329 aa11.56□□□□□ -0.56
CLK3-213ENST00000563842 HTRA1Q92743 480 aa11.56□□□□□ -0.56
CLK3-213ENST00000563842 MRPL24Q96A35 216 aaKnown RBP11.56□□□□□ -0.56
CLK3-213ENST00000563842 RASD2Q96D21 266 aa11.56□□□□□ -0.56
CLK3-213ENST00000563842 CLPTM1LQ96KA5 538 aa11.56□□□□□ -0.56
CLK3-213ENST00000563842 ERMAPQ96PL5 475 aaPredicted RBP11.56□□□□□ -0.56
CLK3-213ENST00000563842 GPA33Q99795 319 aa11.56□□□□□ -0.56
CLK3-213ENST00000563842 IFT27Q9BW83 186 aa11.56□□□□□ -0.56
CLK3-213ENST00000563842 BCL2L14Q9BZR8 327 aa11.56□□□□□ -0.56
CLK3-213ENST00000563842 YY1AP1Q9H869 796 aa11.56□□□□□ -0.56
CLK3-213ENST00000563842 DYNLRB1Q9NP97 96 aa11.56□□□□□ -0.56
CLK3-213ENST00000563842 MYOZ1Q9NP98 299 aaPredicted RBP11.56□□□□□ -0.56
CLK3-213ENST00000563842 POLE4Q9NR33 117 aa11.56□□□□□ -0.56
CLK3-213ENST00000563842 VSX1Q9NZR4 365 aaPredicted RBP11.56□□□□□ -0.56
CLK3-213ENST00000563842 EIF3KQ9UBQ5 218 aaKnown RBP11.56□□□□□ -0.56
CLK3-213ENST00000563842 IL20RAQ9UHF4 553 aa11.56□□□□□ -0.56
CLK3-213ENST00000563842 GPR160Q9UJ42 338 aa11.56□□□□□ -0.56
CLK3-213ENST00000563842 ABCA1O95477 2261 aa11.56□□□□□ -0.56
CLK3-213ENST00000563842 CSPG4Q6UVK1 2322 aa11.55□□□□□ -0.56
CLK3-213ENST00000563842 H7C1C5 153 aa11.55□□□□□ -0.56
CLK3-213ENST00000563842 ACOT8O14734 319 aa11.55□□□□□ -0.56
CLK3-213ENST00000563842 SMAD7O15105 426 aaKnown RBP11.55□□□□□ -0.56
CLK3-213ENST00000563842 SLC16A7O60669 478 aa11.55□□□□□ -0.56
CLK3-213ENST00000563842 PPP1R3DO95685 299 aa11.55□□□□□ -0.56
CLK3-213ENST00000563842 RENP00797 406 aa11.55□□□□□ -0.56
CLK3-213ENST00000563842 STOMP27105 288 aa11.55□□□□□ -0.56
CLK3-213ENST00000563842 GDI2P50395 445 aaKnown RBP11.55□□□□□ -0.56
CLK3-213ENST00000563842 FXYD6P3P58550 94 aa11.55□□□□□ -0.56
CLK3-213ENST00000563842 LCN6P62502 163 aa11.55□□□□□ -0.56
CLK3-213ENST00000563842 RGS7BPQ6MZT1 257 aaPredicted RBP11.55□□□□□ -0.56
CLK3-213ENST00000563842 CLEC9AQ6UXN8 241 aa11.55□□□□□ -0.56
CLK3-213ENST00000563842 DNM1P46Q6ZS02 220 aa11.55□□□□□ -0.56
CLK3-213ENST00000563842 NEU4Q8WWR8 484 aaPredicted RBP11.55□□□□□ -0.56
CLK3-213ENST00000563842 FAM168AQ92567 244 aa11.55□□□□□ -0.56
CLK3-213ENST00000563842 SLC7A6OSQ96CW6 309 aaPredicted RBP11.55□□□□□ -0.56
CLK3-213ENST00000563842 SAMD8Q96LT4 415 aa11.55□□□□□ -0.56
CLK3-213ENST00000563842 SNX18Q96RF0 628 aa11.55□□□□□ -0.56
CLK3-213ENST00000563842 DOK1Q99704 481 aa11.55□□□□□ -0.56
CLK3-213ENST00000563842 REG4Q9BYZ8 158 aa11.55□□□□□ -0.56
CLK3-213ENST00000563842 SYT4Q9H2B2 425 aa11.55□□□□□ -0.56
CLK3-213ENST00000563842 MS4A5Q9H3V2 200 aa11.55□□□□□ -0.56
CLK3-213ENST00000563842 SAMHD1Q9Y3Z3 626 aaKnown RBP11.55□□□□□ -0.56
CLK3-213ENST00000563842 TLN2Q9Y4G6 2542 aa11.55□□□□□ -0.56
CLK3-213ENST00000563842 DHRS12A0PJE2 317 aa11.54□□□□□ -0.56
CLK3-213ENST00000563842 GNGT2O14610 69 aa11.54□□□□□ -0.56
CLK3-213ENST00000563842 SYNGR3O43761 229 aa11.54□□□□□ -0.56
CLK3-213ENST00000563842 CST1P01037 141 aa11.54□□□□□ -0.56
CLK3-213ENST00000563842 SLC25A16P16260 332 aa11.54□□□□□ -0.56
CLK3-213ENST00000563842 GSTM3P21266 225 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms