RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 UBAP1Q9NZ09 502 aa15.8■□□□□ 0.12
NME3-204ENST00000563498 KLHL21Q9UJP4 597 aa15.8■□□□□ 0.12
NME3-204ENST00000563498 PURGQ9UJV8 347 aaKnown RBP15.8■□□□□ 0.12
NME3-204ENST00000563498 NUP50Q9UKX7 468 aa15.8■□□□□ 0.12
NME3-204ENST00000563498 TANC2Q9HCD6 1990 aa15.8■□□□□ 0.12
NME3-204ENST00000563498 C5orf49A4QMS7 147 aa15.79■□□□□ 0.12
NME3-204ENST00000563498 IGF2P01344 180 aa15.79■□□□□ 0.12
NME3-204ENST00000563498 ZNF32P17041 273 aa15.79■□□□□ 0.12
NME3-204ENST00000563498 CD247P20963 164 aa15.79■□□□□ 0.12
NME3-204ENST00000563498 ZFP36P26651 326 aaKnown RBP15.79■□□□□ 0.12
NME3-204ENST00000563498 GDI2P50395 445 aaKnown RBP15.79■□□□□ 0.12
NME3-204ENST00000563498 CYP51A1Q16850 503 aa15.79■□□□□ 0.12
NME3-204ENST00000563498 ARMCX4Q5H9R4 360 aa15.79■□□□□ 0.12
NME3-204ENST00000563498 SPATA46Q5T0L3 261 aa15.79■□□□□ 0.12
NME3-204ENST00000563498 PATL1Q86TB9 770 aaKnown RBP15.79■□□□□ 0.12
NME3-204ENST00000563498 SLC30A8Q8IWU4 369 aa15.79■□□□□ 0.12
NME3-204ENST00000563498 VANGL1Q8TAA9 524 aaPredicted RBP15.79■□□□□ 0.12
NME3-204ENST00000563498 SLC25A40Q8TBP6 338 aa15.79■□□□□ 0.12
NME3-204ENST00000563498 NMD3Q96D46 503 aaKnown RBP15.79■□□□□ 0.12
NME3-204ENST00000563498 PRSS27Q9BQR3 290 aa15.79■□□□□ 0.12
NME3-204ENST00000563498 OR2J1Q9GZK6 312 aa15.79■□□□□ 0.12
NME3-204ENST00000563498 PLEK2Q9NYT0 353 aa15.79■□□□□ 0.12
NME3-204ENST00000563498 UGT2A1Q9Y4X1 527 aa15.79■□□□□ 0.12
NME3-204ENST00000563498 NPTNQ9Y639 398 aa15.79■□□□□ 0.12
NME3-204ENST00000563498 LOC100509620A0A075B734 347 aa15.78■□□□□ 0.12
NME3-204ENST00000563498 DNAJC9-AS1A6NH13 148 aa15.78■□□□□ 0.12
NME3-204ENST00000563498 NPIPB13A6NJU9 1138 aa15.78■□□□□ 0.12
NME3-204ENST00000563498 NPIPB4C9JG80 1138 aa15.78■□□□□ 0.12
NME3-204ENST00000563498 MT-ND1P03886 318 aa15.78■□□□□ 0.12
NME3-204ENST00000563498 F13BP05160 661 aa15.78■□□□□ 0.12
NME3-204ENST00000563498 NR2C1P13056 603 aa15.78■□□□□ 0.12
NME3-204ENST00000563498 AGKQ53H12 422 aa15.78■□□□□ 0.12
NME3-204ENST00000563498 ARMC4Q5T2S8 1044 aa15.78■□□□□ 0.12
NME3-204ENST00000563498 FAM27BQ5VT28 67 aa15.78■□□□□ 0.12
NME3-204ENST00000563498 ZNF771Q7L3S4 317 aaPredicted RBP15.78■□□□□ 0.12
NME3-204ENST00000563498 TLCD1Q96CP7 247 aa15.78■□□□□ 0.12
NME3-204ENST00000563498 EBF4Q9BQW3 602 aa15.78■□□□□ 0.12
NME3-204ENST00000563498 INIPQ9NRY2 104 aa15.78■□□□□ 0.12
NME3-204ENST00000563498 GMNCA6NCL1 334 aa15.77■□□□□ 0.12
NME3-204ENST00000563498 SLC2A10O95528 541 aa15.77■□□□□ 0.12
NME3-204ENST00000563498 IGHV2-70P01814 119 aa15.77■□□□□ 0.12
NME3-204ENST00000563498 IGHMP01871 453 aa15.77■□□□□ 0.12
NME3-204ENST00000563498 TSPAN19P0C672 248 aa15.77■□□□□ 0.12
NME3-204ENST00000563498 CDAP32320 146 aa15.77■□□□□ 0.12
NME3-204ENST00000563498 RBM34P42696 430 aaKnown RBP15.77■□□□□ 0.12
NME3-204ENST00000563498 PPP1CBP62140 327 aa15.77■□□□□ 0.12
NME3-204ENST00000563498 PSG4Q00888 419 aa15.77■□□□□ 0.12
NME3-204ENST00000563498 ZNF154Q13106 437 aa15.77■□□□□ 0.12
NME3-204ENST00000563498 RFPL4BQ6ZWI9 263 aa15.77■□□□□ 0.12
NME3-204ENST00000563498 SPICQ8N5J4 248 aa15.77■□□□□ 0.12
NME3-204ENST00000563498 DPP10Q8N608 796 aa15.77■□□□□ 0.12
NME3-204ENST00000563498 RASSF5Q8WWW0 418 aa15.77■□□□□ 0.12
NME3-204ENST00000563498 LIPHQ8WWY8 451 aa15.77■□□□□ 0.12
NME3-204ENST00000563498 TAMM41Q96BW9 452 aa15.77■□□□□ 0.12
NME3-204ENST00000563498 NPHS2Q9NP85 383 aa15.77■□□□□ 0.12
NME3-204ENST00000563498 MMP26Q9NRE1 261 aa15.77■□□□□ 0.12
NME3-204ENST00000563498 ZNF69Q9UC07 566 aa15.77■□□□□ 0.12
NME3-204ENST00000563498 AUP1Q9Y679 476 aa15.77■□□□□ 0.12
NME3-204ENST00000563498 ARHGAP32A7KAX9 2087 aa15.77■□□□□ 0.11
NME3-204ENST00000563498 POM121CA8CG34 1229 aa15.76■□□□□ 0.11
NME3-204ENST00000563498 CLDN34H7C241 214 aa15.76■□□□□ 0.11
NME3-204ENST00000563498 OR7A10O76100 309 aa15.76■□□□□ 0.11
NME3-204ENST00000563498 RNASE1P07998 156 aaKnown RBP15.76■□□□□ 0.11
NME3-204ENST00000563498 ZNF12P17014 697 aa15.76■□□□□ 0.11
NME3-204ENST00000563498 FUT1P19526 365 aa15.76■□□□□ 0.11
NME3-204ENST00000563498 AQP2P41181 271 aa15.76■□□□□ 0.11
NME3-204ENST00000563498 TMEM155Q4W5P6 130 aa15.76■□□□□ 0.11
NME3-204ENST00000563498 PDLIM3Q53GG5 364 aaPredicted RBP15.76■□□□□ 0.11
NME3-204ENST00000563498 KLF17Q5JT82 389 aaPredicted RBP15.76■□□□□ 0.11
NME3-204ENST00000563498 TREML4Q6UXN2 200 aa15.76■□□□□ 0.11
NME3-204ENST00000563498 ZER1Q7Z7L7 766 aa15.76■□□□□ 0.11
NME3-204ENST00000563498 DHDDSQ86SQ9 333 aa15.76■□□□□ 0.11
NME3-204ENST00000563498 ALDH16A1Q8IZ83 802 aa15.76■□□□□ 0.11
NME3-204ENST00000563498 KLHL36Q8N4N3 616 aa15.76■□□□□ 0.11
NME3-204ENST00000563498 AKR7LQ8NHP1 331 aa15.76■□□□□ 0.11
NME3-204ENST00000563498 ABHD4Q8TB40 342 aa15.76■□□□□ 0.11
NME3-204ENST00000563498 GEMIN6Q8WXD5 167 aaKnown RBP15.76■□□□□ 0.11
NME3-204ENST00000563498 C1orf147Q96MC9 270 aaPredicted RBP15.76■□□□□ 0.11
NME3-204ENST00000563498 OR2H1Q9GZK4 316 aa15.76■□□□□ 0.11
NME3-204ENST00000563498 RABEP2Q9H5N1 569 aa15.76■□□□□ 0.11
NME3-204ENST00000563498 KAT8Q9H7Z6 458 aaKnown RBP15.76■□□□□ 0.11
NME3-204ENST00000563498 NANOGQ9H9S0 305 aa15.76■□□□□ 0.11
NME3-204ENST00000563498 INSIG2Q9Y5U4 225 aa15.76■□□□□ 0.11
NME3-204ENST00000563498 TRRAPQ9Y4A5 3859 aa15.75■□□□□ 0.11
NME3-204ENST00000563498 A8MXK9 166 aa15.75■□□□□ 0.11
NME3-204ENST00000563498 TRAPPC2LH3BP13 241 aa15.75■□□□□ 0.11
NME3-204ENST00000563498 SBK2P0C263 348 aa15.75■□□□□ 0.11
NME3-204ENST00000563498 PCGF2P35227 344 aa15.75■□□□□ 0.11
NME3-204ENST00000563498 SLC6A9P48067 706 aa15.75■□□□□ 0.11
NME3-204ENST00000563498 ARHGDIAP52565 204 aa15.75■□□□□ 0.11
NME3-204ENST00000563498 MTPNP58546 118 aa15.75■□□□□ 0.11
NME3-204ENST00000563498 ERVK-25P63136 954 aa15.75■□□□□ 0.11
NME3-204ENST00000563498 IL13RA1P78552 427 aa15.75■□□□□ 0.11
NME3-204ENST00000563498 TNFAIP6P98066 277 aaPredicted RBP15.75■□□□□ 0.11
NME3-204ENST00000563498 BAMBIQ13145 260 aa15.75■□□□□ 0.11
NME3-204ENST00000563498 CDK5R2Q13319 367 aa15.75■□□□□ 0.11
NME3-204ENST00000563498 SGCAQ16586 387 aa15.75■□□□□ 0.11
NME3-204ENST00000563498 SPRNQ5BIV9 151 aa15.75■□□□□ 0.11
NME3-204ENST00000563498 MTX3Q5HYI7 312 aa15.75■□□□□ 0.11
NME3-204ENST00000563498 INTS11Q5TA45 600 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms