RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 HNRNPA0Q13151 305 aaKnown RBP14.17□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 FAM209AQ5JX71 171 aa14.17□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 SLC25A47Q6Q0C1 308 aa14.17□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 RFPL4BQ6ZWI9 263 aa14.17□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 C1QL2Q7Z5L3 287 aa14.17□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 PEG10Q86TG7 708 aaKnown RBP14.17□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 CLDN22Q8N7P3 220 aa14.17□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 OR4M2Q8NGB6 313 aa14.17□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 SLC25A40Q8TBP6 338 aa14.17□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 OR2J1Q9GZK6 312 aa14.17□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 KCNN2Q9H2S1 579 aa14.17□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 TXNIPQ9H3M7 391 aa14.17□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 STX18Q9P2W9 335 aaKnown RBP14.17□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 BAG5Q9UL15 447 aa14.17□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 HIF3AQ9Y2N7 669 aa14.17□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 MED31Q9Y3C7 131 aa14.17□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 TANC2Q9HCD6 1990 aa14.16□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 TMEM89A2RUT3 159 aa14.16□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 UBOX5O94941 541 aa14.16□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 FUT4P22083 530 aa14.16□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 GCH1P30793 250 aa14.16□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 TOP3AQ13472 1001 aaPredicted RBP14.16□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 CYLC2Q14093 348 aaPredicted RBP14.16□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 SGCAQ16586 387 aa14.16□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 ZNF718Q3SXZ3 478 aa14.16□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 SPRNQ5BIV9 151 aa14.16□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 ALG10Q5BKT4 473 aa14.16□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 FAM27BQ5VT28 67 aa14.16□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 DCAF12L2Q5VW00 463 aa14.16□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 MBNL2Q5VZF2 373 aaKnown RBP14.16□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 METTL21CQ5VZV1 264 aa14.16□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 ZNF771Q7L3S4 317 aaPredicted RBP14.16□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 TEX29Q8N6K0 151 aa14.16□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 OR8J3Q8NGG0 315 aa14.16□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 KLF14Q8TD94 323 aaPredicted RBP14.16□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 CCL17Q92583 94 aa14.16□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 RAB1CQ92928 201 aa14.16□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 LRRC58Q96CX6 371 aa14.16□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 ELMOD3Q96FG2 381 aa14.16□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 ZNF583Q96ND8 569 aa14.16□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 OR2H1Q9GZK4 316 aa14.16□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 WNT5BQ9H1J7 359 aa14.16□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 PLSCR5A0PG75 271 aa14.15□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 J3QLI3 93 aa14.15□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 ICMTO60725 284 aa14.15□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 NGFP01138 241 aa14.15□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 IGHMP01871 453 aa14.15□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 THRBP10828 461 aa14.15□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 LAP3P28838 519 aa14.15□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 GDI2P50395 445 aaKnown RBP14.15□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 IGFN1Q86VF2 1251 aa14.15□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 ABHD4Q8TB40 342 aa14.15□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 TIMD4Q96H15 378 aa14.15□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 SLC6A7Q99884 636 aa14.15□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 SH3GL1Q99961 368 aa14.15□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 GAL3ST1Q99999 423 aa14.15□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 ECSITQ9BQ95 431 aa14.15□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 SIKE1Q9BRV8 207 aa14.15□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 ALG12Q9BV10 488 aa14.15□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 ESM1Q9NQ30 184 aa14.15□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 EIF3KQ9UBQ5 218 aaKnown RBP14.15□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 OPN4Q9UHM6 478 aa14.15□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 HMGB1P1B2RPK0 211 aaPredicted RBP14.14□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 TRIM77I1YAP6 450 aa14.14□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 FSHBP01225 129 aa14.14□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 ADH4P08319 380 aa14.14□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 CST2P09228 141 aa14.14□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 RBMXP38159 391 aaKnown RBP14.14□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 RPL27P61353 136 aaKnown RBP14.14□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 CYBRD1Q53TN4 286 aa14.14□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 FOXL2NBQ6ZUU3 175 aa14.14□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 LRRC75AQ8NAA5 344 aa14.14□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 C10orf82Q8WW14 230 aa14.14□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 GEMIN6Q8WXD5 167 aaKnown RBP14.14□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 GCDHQ92947 438 aaPredicted RBP14.14□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 BPIFA2Q96DR5 249 aa14.14□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 KLHL21Q9UJP4 597 aa14.14□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 A4GNTQ9UNA3 340 aa14.14□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 DYSFO75923 2080 aa14.14□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 ISPDA4D126 451 aa14.13□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 GMNCA6NCL1 334 aa14.13□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 NR2C1P13056 603 aa14.13□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 IFI30P13284 250 aa14.13□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 GATA3P23771 443 aa14.13□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 PPP1CBP62140 327 aa14.13□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 LCN2P80188 198 aa14.13□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 FHL1Q13642 323 aa14.13□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 TAF11Q15544 211 aa14.13□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 LRRC23Q53EV4 343 aaPredicted RBP14.13□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 COQ5Q5HYK3 327 aa14.13□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 ZNF774Q6NX45 483 aa14.13□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 ERICH5Q6P6B1 374 aa14.13□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 UNQ6126/PRO20091Q6UXV3 157 aa14.13□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 C3orf56Q8N813 242 aa14.13□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 NANPQ8TBE9 248 aa14.13□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 JMJD8Q96S16 334 aa14.13□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 RBM4Q9BWF3 364 aaKnown RBP14.13□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 SUCNR1Q9BXA5 334 aa14.13□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 TMEM120AQ9BXJ8 343 aa14.13□□□□□ -0.15
VPS9D1-AS1-201ENST00000562298 EGLN1Q9GZT9 426 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms