RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 FAM46CQ5VWP2 391 aa16.91■□□□□ 0.3
RAB40C-206ENST00000561781 TAF8Q7Z7C8 310 aa16.91■□□□□ 0.3
RAB40C-206ENST00000561781 SMRP1Q8NCR6 262 aa16.91■□□□□ 0.3
RAB40C-206ENST00000561781 DCUN1D4Q92564 292 aa16.91■□□□□ 0.3
RAB40C-206ENST00000561781 EFCAB11Q9BUY7 163 aa16.91■□□□□ 0.3
RAB40C-206ENST00000561781 DDA1Q9BW61 102 aa16.91■□□□□ 0.3
RAB40C-206ENST00000561781 OR51V1Q9H2C8 321 aa16.91■□□□□ 0.3
RAB40C-206ENST00000561781 TRBV23OR9-2A0A075B6M9 112 aa16.9■□□□□ 0.3
RAB40C-206ENST00000561781 CCDC187A0A096LP49 1063 aa16.9■□□□□ 0.3
RAB40C-206ENST00000561781 TVP23AA6NH52 213 aa16.9■□□□□ 0.3
RAB40C-206ENST00000561781 RTCAO00442 366 aaKnown RBP16.9■□□□□ 0.3
RAB40C-206ENST00000561781 AGPAT2O15120 278 aa16.9■□□□□ 0.3
RAB40C-206ENST00000561781 PAPLNO95428 1278 aa16.9■□□□□ 0.3
RAB40C-206ENST00000561781 PLGP00747 810 aaPredicted RBP16.9■□□□□ 0.3
RAB40C-206ENST00000561781 SFTPBP07988 381 aa16.9■□□□□ 0.3
RAB40C-206ENST00000561781 SPARCP09486 303 aa16.9■□□□□ 0.3
RAB40C-206ENST00000561781 CEBPBP17676 345 aa16.9■□□□□ 0.3
RAB40C-206ENST00000561781 FUT5Q11128 374 aa16.9■□□□□ 0.3
RAB40C-206ENST00000561781 TXNDC8Q6A555 127 aa16.9■□□□□ 0.3
RAB40C-206ENST00000561781 TMEM184AQ6ZMB5 413 aa16.9■□□□□ 0.3
RAB40C-206ENST00000561781 RFLNBQ8N5W9 214 aa16.9■□□□□ 0.3
RAB40C-206ENST00000561781 FRMD1Q8N878 549 aa16.9■□□□□ 0.3
RAB40C-206ENST00000561781 TMEM255BQ8WV15 326 aa16.9■□□□□ 0.3
RAB40C-206ENST00000561781 YPEL4Q96NS1 127 aa16.9■□□□□ 0.3
RAB40C-206ENST00000561781 SLC17A9Q9BYT1 436 aa16.9■□□□□ 0.3
RAB40C-206ENST00000561781 FKRPQ9H9S5 495 aa16.9■□□□□ 0.3
RAB40C-206ENST00000561781 PARP11Q9NR21 331 aa16.9■□□□□ 0.3
RAB40C-206ENST00000561781 A0A087WUJ7 227 aa16.9■□□□□ 0.3
RAB40C-206ENST00000561781 TRBV6-7A0A0A0MS04 114 aa16.9■□□□□ 0.3
RAB40C-206ENST00000561781 ZNF724A8MTY0 619 aa16.9■□□□□ 0.3
RAB40C-206ENST00000561781 CD3DP04234 171 aa16.9■□□□□ 0.3
RAB40C-206ENST00000561781 PRRT3Q5FWE3 981 aa16.9■□□□□ 0.3
RAB40C-206ENST00000561781 ADGRF1Q5T601 910 aa16.9■□□□□ 0.3
RAB40C-206ENST00000561781 TPRG1Q6ZUI0 275 aa16.9■□□□□ 0.3
RAB40C-206ENST00000561781 PPP1R3BQ86XI6 285 aa16.9■□□□□ 0.3
RAB40C-206ENST00000561781 SVIPQ8NHG7 77 aa16.9■□□□□ 0.3
RAB40C-206ENST00000561781 POC1BQ8TC44 478 aa16.9■□□□□ 0.3
RAB40C-206ENST00000561781 M1APQ8TC57 530 aa16.9■□□□□ 0.3
RAB40C-206ENST00000561781 ZNF480Q8WV37 535 aa16.9■□□□□ 0.3
RAB40C-206ENST00000561781 WBP2Q969T9 261 aa16.9■□□□□ 0.3
RAB40C-206ENST00000561781 SLC25A36Q96CQ1 311 aa16.9■□□□□ 0.3
RAB40C-206ENST00000561781 C20orf24Q9BUV8 137 aa16.9■□□□□ 0.3
RAB40C-206ENST00000561781 SLC25A18Q9H1K4 315 aa16.9■□□□□ 0.3
RAB40C-206ENST00000561781 ADGRL4Q9HBW9 690 aa16.9■□□□□ 0.3
RAB40C-206ENST00000561781 STC2O76061 302 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 OR2C1O95371 312 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 HLA-AP01891 365 aaKnown RBP16.89■□□□□ 0.29
RAB40C-206ENST00000561781 PSMB6P28072 239 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 TOMM34Q15785 309 aaPredicted RBP16.89■□□□□ 0.29
RAB40C-206ENST00000561781 DECR1Q16698 335 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 TP53I3Q53FA7 332 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 RPL22L1Q6P5R6 122 aaKnown RBP16.89■□□□□ 0.29
RAB40C-206ENST00000561781 FRRS1Q6ZNA5 592 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 PEG10Q86TG7 708 aaKnown RBP16.89■□□□□ 0.29
RAB40C-206ENST00000561781 LRRC18Q8N456 261 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 SUN3Q8TAQ9 357 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 CCNL2Q96S94 520 aaPredicted RBP16.89■□□□□ 0.29
RAB40C-206ENST00000561781 TRBV2A0A0J9YWF9 115 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 SLC5A10A0PJK1 596 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 PHOX2AO14813 284 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 SMAD9O15198 467 aaKnown RBP16.89■□□□□ 0.29
RAB40C-206ENST00000561781 GPRIN2O60269 458 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 SOCS5O75159 536 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 ADAP1O75689 374 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 SOD3P08294 240 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 CLUP10909 449 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 FUT1P19526 365 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 IL2RGP31785 369 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 MAP3K8P41279 467 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 SIRPAP78324 504 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 NKX6-1P78426 367 aaPredicted RBP16.89■□□□□ 0.29
RAB40C-206ENST00000561781 GLO1Q04760 184 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 MEF2DQ14814 521 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 LRRC73Q5JTD7 316 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 POMZP3Q6PJE2 187 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 OR2A12Q8NGT7 310 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 TERB2Q8NHR7 220 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 WFDC5Q8TCV5 224 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 SLC2A12Q8TD20 617 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 HLA-CQ95604 372 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 MVB12AQ96EY5 273 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 LYSMD1Q96S90 227 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 CDC6Q99741 560 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 EPHX3Q9H6B9 360 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 BCL2L10Q9HD36 194 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 DYRK1BQ9Y463 629 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 CSAG2Q9Y5P2 127 aa16.89■□□□□ 0.29
RAB40C-206ENST00000561781 PLPP1O14494 284 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 TBL1XO60907 577 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 THY1P04216 161 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 FABP4P15090 132 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 IL9P15248 144 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 SLC10A1Q14973 349 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 ZNF585AQ6P3V2 769 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 TMEM159Q96B96 161 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 TM4SF18Q96CE8 201 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 WDR34Q96EX3 536 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 PTCHD1Q96NR3 888 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 TMEM208Q9BTX3 173 aa16.88■□□□□ 0.29
RAB40C-206ENST00000561781 C1QTNF2Q9BXJ5 285 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms