RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 ZNF32P17041 273 aa8.8□□□□□ -1
CLK3-205ENST00000561673 SRD5A1P18405 259 aa8.8□□□□□ -1
CLK3-205ENST00000561673 CCNOP22674 350 aa8.8□□□□□ -1
CLK3-205ENST00000561673 APLNRP35414 380 aa8.8□□□□□ -1
CLK3-205ENST00000561673 MAGEB1P43366 347 aa8.8□□□□□ -1
CLK3-205ENST00000561673 GPR4P46093 362 aa8.8□□□□□ -1
CLK3-205ENST00000561673 SLC9A3P48764 834 aa8.8□□□□□ -1
CLK3-205ENST00000561673 KLF3P57682 345 aaPredicted RBP8.8□□□□□ -1
CLK3-205ENST00000561673 SELENOVP59797 346 aa8.8□□□□□ -1
CLK3-205ENST00000561673 PSME3P61289 254 aa8.8□□□□□ -1
CLK3-205ENST00000561673 ERVK-25P63136 954 aa8.8□□□□□ -1
CLK3-205ENST00000561673 PSG4Q00888 419 aa8.8□□□□□ -1
CLK3-205ENST00000561673 NKPD1Q17RQ9 610 aa8.8□□□□□ -1
CLK3-205ENST00000561673 ANKDD1AQ495B1 522 aa8.8□□□□□ -1
CLK3-205ENST00000561673 FAM27BQ5VT28 67 aa8.8□□□□□ -1
CLK3-205ENST00000561673 LINC01356Q8N9X3 169 aa8.8□□□□□ -1
CLK3-205ENST00000561673 ICA1LQ8NDH6 482 aa8.8□□□□□ -1
CLK3-205ENST00000561673 OR13C2Q8NGS9 318 aa8.8□□□□□ -1
CLK3-205ENST00000561673 AKR7LQ8NHP1 331 aa8.8□□□□□ -1
CLK3-205ENST00000561673 YIPF5Q969M3 257 aa8.8□□□□□ -1
CLK3-205ENST00000561673 FAM162AQ96A26 154 aa8.8□□□□□ -1
CLK3-205ENST00000561673 CMTM5Q96DZ9 223 aa8.8□□□□□ -1
CLK3-205ENST00000561673 C1orf159Q96HA4 380 aa8.8□□□□□ -1
CLK3-205ENST00000561673 POM121L2Q96KW2 1035 aa8.8□□□□□ -1
CLK3-205ENST00000561673 BCL2L14Q9BZR8 327 aa8.8□□□□□ -1
CLK3-205ENST00000561673 MYLK2Q9H1R3 596 aa8.8□□□□□ -1
CLK3-205ENST00000561673 NMNAT1Q9HAN9 279 aaPredicted RBP8.8□□□□□ -1
CLK3-205ENST00000561673 HINT3Q9NQE9 182 aaKnown RBP8.8□□□□□ -1
CLK3-205ENST00000561673 SLCO1C1Q9NYB5 712 aa8.8□□□□□ -1
CLK3-205ENST00000561673 ABCD2Q9UBJ2 740 aa8.8□□□□□ -1
CLK3-205ENST00000561673 GPR160Q9UJ42 338 aa8.8□□□□□ -1
CLK3-205ENST00000561673 ANK2Q01484 3957 aa8.8□□□□□ -1
CLK3-205ENST00000561673 C5orf49A4QMS7 147 aa8.79□□□□□ -1
CLK3-205ENST00000561673 GMNCA6NCL1 334 aa8.79□□□□□ -1
CLK3-205ENST00000561673 A6NIZ1 184 aa8.79□□□□□ -1
CLK3-205ENST00000561673 C17orf100A8MU93 164 aa8.79□□□□□ -1
CLK3-205ENST00000561673 H7C1C5 153 aa8.79□□□□□ -1
CLK3-205ENST00000561673 NDUFAB1O14561 156 aa8.79□□□□□ -1
CLK3-205ENST00000561673 WNT9BO14905 357 aa8.79□□□□□ -1
CLK3-205ENST00000561673 PHF1O43189 567 aaPredicted RBP8.79□□□□□ -1
CLK3-205ENST00000561673 CST2P09228 141 aa8.79□□□□□ -1
CLK3-205ENST00000561673 NR2C1P13056 603 aa8.79□□□□□ -1
CLK3-205ENST00000561673 ACHEP22303 614 aa8.79□□□□□ -1
CLK3-205ENST00000561673 LAP3P28838 519 aa8.79□□□□□ -1
CLK3-205ENST00000561673 WNT5AP41221 380 aa8.79□□□□□ -1
CLK3-205ENST00000561673 GUCA1AP43080 201 aaPredicted RBP8.79□□□□□ -1
CLK3-205ENST00000561673 GPR6P46095 362 aaPredicted RBP8.79□□□□□ -1
CLK3-205ENST00000561673 TMEM33P57088 247 aa8.79□□□□□ -1
CLK3-205ENST00000561673 RAP1BP61224 184 aa8.79□□□□□ -1
CLK3-205ENST00000561673 LCN6P62502 163 aa8.79□□□□□ -1
CLK3-205ENST00000561673 RAP1AP62834 184 aa8.79□□□□□ -1
CLK3-205ENST00000561673 CCL8P80075 99 aa8.79□□□□□ -1
CLK3-205ENST00000561673 MRPS11P82912 194 aaKnown RBP8.79□□□□□ -1
CLK3-205ENST00000561673 CCNIQ14094 377 aa8.79□□□□□ -1
CLK3-205ENST00000561673 CR1LQ2VPA4 569 aa8.79□□□□□ -1
CLK3-205ENST00000561673 ZBED5Q49AG3 693 aa8.79□□□□□ -1
CLK3-205ENST00000561673 FAM205BPQ63HN1 556 aa8.79□□□□□ -1
CLK3-205ENST00000561673 TMEM154Q6P9G4 183 aa8.79□□□□□ -1
CLK3-205ENST00000561673 FOXL2NBQ6ZUU3 175 aa8.79□□□□□ -1
CLK3-205ENST00000561673 TMPRSS11FQ6ZWK6 438 aa8.79□□□□□ -1
CLK3-205ENST00000561673 CYP4Z1Q86W10 505 aa8.79□□□□□ -1
CLK3-205ENST00000561673 PHC2Q8IXK0 858 aa8.79□□□□□ -1
CLK3-205ENST00000561673 ZNF101Q8IZC7 436 aa8.79□□□□□ -1
CLK3-205ENST00000561673 PLPP7Q8NBV4 271 aa8.79□□□□□ -1
CLK3-205ENST00000561673 OR1J1Q8NGS3 322 aa8.79□□□□□ -1
CLK3-205ENST00000561673 FNDC8Q8TC99 324 aa8.79□□□□□ -1
CLK3-205ENST00000561673 SLC7A13Q8TCU3 470 aa8.79□□□□□ -1
CLK3-205ENST00000561673 TMEM158Q8WZ71 300 aa8.79□□□□□ -1
CLK3-205ENST00000561673 GTF3AQ92664 365 aaKnown RBP8.79□□□□□ -1
CLK3-205ENST00000561673 OR2H1Q9GZK4 316 aa8.79□□□□□ -1
CLK3-205ENST00000561673 WNT5BQ9H1J7 359 aa8.79□□□□□ -1
CLK3-205ENST00000561673 ZNF275Q9NSD4 429 aaPredicted RBP8.79□□□□□ -1
CLK3-205ENST00000561673 NDUFAF4Q9P032 175 aa8.79□□□□□ -1
CLK3-205ENST00000561673 GRHPRQ9UBQ7 328 aa8.79□□□□□ -1
CLK3-205ENST00000561673 EGFL7Q9UHF1 273 aa8.79□□□□□ -1
CLK3-205ENST00000561673 ADAM18Q9Y3Q7 739 aa8.79□□□□□ -1
CLK3-205ENST00000561673 TIMM10BQ9Y5J6 103 aa8.79□□□□□ -1
CLK3-205ENST00000561673 ENPP4Q9Y6X5 453 aa8.79□□□□□ -1
CLK3-205ENST00000561673 STAB1Q9NY15 2570 aa8.78□□□□□ -1
CLK3-205ENST00000561673 A0A1W2PPL8 197 aa8.78□□□□□ -1
CLK3-205ENST00000561673 A0A1W2PRQ8 180 aa8.78□□□□□ -1
CLK3-205ENST00000561673 PPIHO43447 177 aaKnown RBP8.78□□□□□ -1
CLK3-205ENST00000561673 ATP8B1O43520 1251 aa8.78□□□□□ -1
CLK3-205ENST00000561673 CDC14BO60729 498 aa8.78□□□□□ -1
CLK3-205ENST00000561673 PTP4A3O75365 173 aa8.78□□□□□ -1
CLK3-205ENST00000561673 RP2O75695 350 aa8.78□□□□□ -1
CLK3-205ENST00000561673 IGHV3-13P01766 116 aa8.78□□□□□ -1
CLK3-205ENST00000561673 CD14P08571 375 aa8.78□□□□□ -1
CLK3-205ENST00000561673 HNF1AP20823 631 aa8.78□□□□□ -1
CLK3-205ENST00000561673 DRD4P21917 467 aa8.78□□□□□ -1
CLK3-205ENST00000561673 THBS2P35442 1172 aa8.78□□□□□ -1
CLK3-205ENST00000561673 RPL4P36578 427 aaKnown RBP8.78□□□□□ -1
CLK3-205ENST00000561673 GDI2P50395 445 aaKnown RBP8.78□□□□□ -1
CLK3-205ENST00000561673 CDH15P55291 814 aa8.78□□□□□ -1
CLK3-205ENST00000561673 PCBD1P61457 104 aa8.78□□□□□ -1
CLK3-205ENST00000561673 DGCR6Q14129 220 aa8.78□□□□□ -1
CLK3-205ENST00000561673 ENDOGQ14249 297 aaKnown RBP8.78□□□□□ -1
CLK3-205ENST00000561673 MOGQ16653 247 aa8.78□□□□□ -1
CLK3-205ENST00000561673 PCGF3Q3KNV8 242 aa8.78□□□□□ -1
CLK3-205ENST00000561673 TMEM255AQ5JRV8 349 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms