RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 ADIPOQQ15848 244 aa17.23■□□□□ 0.35
TSPAN3-210ENST00000561277 PABPC1L2AQ5JQF8 200 aa17.23■□□□□ 0.35
TSPAN3-210ENST00000561277 FAM27BQ5VT28 67 aa17.23■□□□□ 0.35
TSPAN3-210ENST00000561277 LEG1Q6P5S2 330 aa17.23■□□□□ 0.35
TSPAN3-210ENST00000561277 FOXL2NBQ6ZUU3 175 aa17.23■□□□□ 0.35
TSPAN3-210ENST00000561277 SLC30A7Q8NEW0 376 aa17.23■□□□□ 0.35
TSPAN3-210ENST00000561277 OR4K13Q8NH42 304 aa17.23■□□□□ 0.35
TSPAN3-210ENST00000561277 NMNAT3Q96T66 252 aa17.23■□□□□ 0.35
TSPAN3-210ENST00000561277 PLA2G12AQ9BZM1 189 aa17.23■□□□□ 0.35
TSPAN3-210ENST00000561277 NUAK2Q9H093 628 aa17.23■□□□□ 0.35
TSPAN3-210ENST00000561277 YY1AP1Q9H869 796 aa17.23■□□□□ 0.35
TSPAN3-210ENST00000561277 EMC7Q9NPA0 242 aa17.23■□□□□ 0.35
TSPAN3-210ENST00000561277 POLE4Q9NR33 117 aa17.23■□□□□ 0.35
TSPAN3-210ENST00000561277 GDF2Q9UK05 429 aaPredicted RBP17.23■□□□□ 0.35
TSPAN3-210ENST00000561277 IQCMA0A1B0GVH7 501 aa17.22■□□□□ 0.35
TSPAN3-210ENST00000561277 ARPC3O15145 178 aa17.22■□□□□ 0.35
TSPAN3-210ENST00000561277 MGRN1O60291 552 aa17.22■□□□□ 0.35
TSPAN3-210ENST00000561277 E2F6O75461 281 aa17.22■□□□□ 0.35
TSPAN3-210ENST00000561277 SCG5P05408 212 aa17.22■□□□□ 0.35
TSPAN3-210ENST00000561277 SERPINF1P36955 418 aa17.22■□□□□ 0.35
TSPAN3-210ENST00000561277 DBPQ10586 325 aaPredicted RBP17.22■□□□□ 0.35
TSPAN3-210ENST00000561277 SLC35F1Q5T1Q4 408 aa17.22■□□□□ 0.35
TSPAN3-210ENST00000561277 C1orf146Q5VVC0 180 aa17.22■□□□□ 0.35
TSPAN3-210ENST00000561277 OTPQ5XKR4 325 aa17.22■□□□□ 0.35
TSPAN3-210ENST00000561277 RPL13AP3Q6NVV1 102 aa17.22■□□□□ 0.35
TSPAN3-210ENST00000561277 UGT2A3Q6UWM9 527 aa17.22■□□□□ 0.35
TSPAN3-210ENST00000561277 RASSF6Q6ZTQ3 369 aa17.22■□□□□ 0.35
TSPAN3-210ENST00000561277 GIPC3Q8TF64 312 aa17.22■□□□□ 0.35
TSPAN3-210ENST00000561277 SLCO4A1Q96BD0 722 aa17.22■□□□□ 0.35
TSPAN3-210ENST00000561277 Q96MF0 132 aa17.22■□□□□ 0.35
TSPAN3-210ENST00000561277 TSSK2Q96PF2 358 aa17.22■□□□□ 0.35
TSPAN3-210ENST00000561277 MMADHCQ9H3L0 296 aaPredicted RBP17.22■□□□□ 0.35
TSPAN3-210ENST00000561277 TBC1D23Q9NUY8 699 aa17.22■□□□□ 0.35
TSPAN3-210ENST00000561277 COA3Q9Y2R0 106 aaPredicted RBP17.22■□□□□ 0.35
TSPAN3-210ENST00000561277 KHDRBS3O75525 346 aaKnown RBP17.21■□□□□ 0.35
TSPAN3-210ENST00000561277 IGFBP1P08833 259 aaPredicted RBP17.21■□□□□ 0.35
TSPAN3-210ENST00000561277 CST2P09228 141 aa17.21■□□□□ 0.35
TSPAN3-210ENST00000561277 NR4A1P22736 598 aa17.21■□□□□ 0.35
TSPAN3-210ENST00000561277 APEX1P27695 318 aaKnown RBP17.21■□□□□ 0.35
TSPAN3-210ENST00000561277 ENDOGQ14249 297 aaKnown RBP17.21■□□□□ 0.35
TSPAN3-210ENST00000561277 GK3PQ14409 553 aa17.21■□□□□ 0.35
TSPAN3-210ENST00000561277 TBC1D28Q2M2D7 210 aa17.21■□□□□ 0.35
TSPAN3-210ENST00000561277 CCDC121Q6ZUS5 278 aa17.21■□□□□ 0.35
TSPAN3-210ENST00000561277 TMEM179BQ7Z7N9 219 aa17.21■□□□□ 0.35
TSPAN3-210ENST00000561277 SDR9C7Q8NEX9 313 aa17.21■□□□□ 0.35
TSPAN3-210ENST00000561277 OR8D4Q8NGM9 314 aa17.21■□□□□ 0.35
TSPAN3-210ENST00000561277 AKR7LQ8NHP1 331 aa17.21■□□□□ 0.35
TSPAN3-210ENST00000561277 NIPSNAP1Q9BPW8 284 aa17.21■□□□□ 0.35
TSPAN3-210ENST00000561277 ZNF416Q9BWM5 594 aa17.21■□□□□ 0.35
TSPAN3-210ENST00000561277 DGCR6LQ9BY27 220 aa17.21■□□□□ 0.35
TSPAN3-210ENST00000561277 ZNF442Q9H7R0 627 aa17.21■□□□□ 0.35
TSPAN3-210ENST00000561277 CDH20Q9HBT6 801 aa17.21■□□□□ 0.35
TSPAN3-210ENST00000561277 PDP1Q9P0J1 537 aaPredicted RBP17.21■□□□□ 0.35
TSPAN3-210ENST00000561277 SPEF1Q9Y4P9 236 aa17.21■□□□□ 0.35
TSPAN3-210ENST00000561277 GPRIN2O60269 458 aa17.2■□□□□ 0.34
TSPAN3-210ENST00000561277 RENP00797 406 aa17.2■□□□□ 0.34
TSPAN3-210ENST00000561277 PTHP01270 115 aa17.2■□□□□ 0.34
TSPAN3-210ENST00000561277 IGHV4-39P01824 125 aa17.2■□□□□ 0.34
TSPAN3-210ENST00000561277 BMP4P12644 408 aa17.2■□□□□ 0.34
TSPAN3-210ENST00000561277 CD99P14209 185 aa17.2■□□□□ 0.34
TSPAN3-210ENST00000561277 GSTM3P21266 225 aa17.2■□□□□ 0.34
TSPAN3-210ENST00000561277 CENPAP49450 140 aa17.2■□□□□ 0.34
TSPAN3-210ENST00000561277 SNRPD2P62316 118 aaKnown RBP17.2■□□□□ 0.34
TSPAN3-210ENST00000561277 MST1LQ2TV78 715 aa17.2■□□□□ 0.34
TSPAN3-210ENST00000561277 PRSS57Q6UWY2 283 aa17.2■□□□□ 0.34
TSPAN3-210ENST00000561277 PAQR4Q8N4S7 273 aaPredicted RBP17.2■□□□□ 0.34
TSPAN3-210ENST00000561277 PAPD5Q8NDF8 572 aaKnown RBP17.2■□□□□ 0.34
TSPAN3-210ENST00000561277 CPEB3Q8NE35 698 aaKnown RBP17.2■□□□□ 0.34
TSPAN3-210ENST00000561277 OR52E2Q8NGJ4 325 aa17.2■□□□□ 0.34
TSPAN3-210ENST00000561277 FEVQ99581 238 aa17.2■□□□□ 0.34
TSPAN3-210ENST00000561277 TEP1Q99973 2627 aaKnown RBP17.2■□□□□ 0.34
TSPAN3-210ENST00000561277 OR51B6Q9H340 312 aa17.2■□□□□ 0.34
TSPAN3-210ENST00000561277 C1orf198Q9H425 327 aa17.2■□□□□ 0.34
TSPAN3-210ENST00000561277 FN3KQ9H479 309 aa17.2■□□□□ 0.34
TSPAN3-210ENST00000561277 IL20Q9NYY1 176 aa17.2■□□□□ 0.34
TSPAN3-210ENST00000561277 FLNAP21333 2647 aaKnown RBP17.2■□□□□ 0.34
TSPAN3-210ENST00000561277 C12orf71A8MTZ7 269 aa17.19■□□□□ 0.34
TSPAN3-210ENST00000561277 DCTN6O00399 190 aa17.19■□□□□ 0.34
TSPAN3-210ENST00000561277 BHLHE40O14503 412 aa17.19■□□□□ 0.34
TSPAN3-210ENST00000561277 TIPRLO75663 272 aa17.19■□□□□ 0.34
TSPAN3-210ENST00000561277 MPZL1O95297 269 aa17.19■□□□□ 0.34
TSPAN3-210ENST00000561277 FAM157BP0CG42 384 aa17.19■□□□□ 0.34
TSPAN3-210ENST00000561277 CCNOP22674 350 aa17.19■□□□□ 0.34
TSPAN3-210ENST00000561277 APLNRP35414 380 aa17.19■□□□□ 0.34
TSPAN3-210ENST00000561277 PSG4Q00888 419 aa17.19■□□□□ 0.34
TSPAN3-210ENST00000561277 SWI5Q1ZZU3 235 aa17.19■□□□□ 0.34
TSPAN3-210ENST00000561277 DNM1P34Q6PK57 102 aa17.19■□□□□ 0.34
TSPAN3-210ENST00000561277 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.19■□□□□ 0.34
TSPAN3-210ENST00000561277 GLB1L2Q8IW92 636 aa17.19■□□□□ 0.34
TSPAN3-210ENST00000561277 HS3ST5Q8IZT8 346 aa17.19■□□□□ 0.34
TSPAN3-210ENST00000561277 TMUB1Q9BVT8 246 aa17.19■□□□□ 0.34
TSPAN3-210ENST00000561277 TSSK6Q9BXA6 273 aa17.19■□□□□ 0.34
TSPAN3-210ENST00000561277 OR2H1Q9GZK4 316 aa17.19■□□□□ 0.34
TSPAN3-210ENST00000561277 SRA1Q9HD15 236 aaKnown RBP17.19■□□□□ 0.34
TSPAN3-210ENST00000561277 RPRD1BQ9NQG5 326 aaKnown RBP17.19■□□□□ 0.34
TSPAN3-210ENST00000561277 ARMC1Q9NVT9 282 aa17.19■□□□□ 0.34
TSPAN3-210ENST00000561277 DNAJB9Q9UBS3 223 aa17.19■□□□□ 0.34
TSPAN3-210ENST00000561277 VSTM5A8MXK1 200 aa17.19■□□□□ 0.34
TSPAN3-210ENST00000561277 IDH3BO43837 385 aa17.19■□□□□ 0.34
TSPAN3-210ENST00000561277 GPANK1O95872 356 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms