RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 SIAH2O43255 324 aa12.21□□□□□ -0.45
PKNOX1-209ENST00000560448 WBP4O75554 376 aaKnown RBP12.21□□□□□ -0.45
PKNOX1-209ENST00000560448 IGLV1-44P01699 117 aa12.21□□□□□ -0.45
PKNOX1-209ENST00000560448 TP53P04637 393 aaPredicted RBP12.21□□□□□ -0.45
PKNOX1-209ENST00000560448 HTR1AP08908 422 aa12.21□□□□□ -0.45
PKNOX1-209ENST00000560448 B4GALT1P15291 398 aa12.21□□□□□ -0.45
PKNOX1-209ENST00000560448 CBR1P16152 277 aa12.21□□□□□ -0.45
PKNOX1-209ENST00000560448 JUNBP17275 347 aaPredicted RBP12.21□□□□□ -0.45
PKNOX1-209ENST00000560448 GABRB1P18505 474 aa12.21□□□□□ -0.45
PKNOX1-209ENST00000560448 LOXP28300 417 aaPredicted RBP12.21□□□□□ -0.45
PKNOX1-209ENST00000560448 CRABP1P29762 137 aa12.21□□□□□ -0.45
PKNOX1-209ENST00000560448 CRISP1P54107 249 aa12.21□□□□□ -0.45
PKNOX1-209ENST00000560448 ESRRGP62508 458 aa12.21□□□□□ -0.45
PKNOX1-209ENST00000560448 SLC36A2Q495M3 483 aa12.21□□□□□ -0.45
PKNOX1-209ENST00000560448 MESTQ5EB52 335 aa12.21□□□□□ -0.45
PKNOX1-209ENST00000560448 SLC25A47Q6Q0C1 308 aa12.21□□□□□ -0.45
PKNOX1-209ENST00000560448 C20orf204Q6ZNR8 217 aa12.21□□□□□ -0.45
PKNOX1-209ENST00000560448 ENTHD1Q8IYW4 607 aa12.21□□□□□ -0.45
PKNOX1-209ENST00000560448 SYT14Q8NB59 555 aa12.21□□□□□ -0.45
PKNOX1-209ENST00000560448 OR2T33Q8NG76 320 aa12.21□□□□□ -0.45
PKNOX1-209ENST00000560448 SGCDQ92629 289 aa12.21□□□□□ -0.45
PKNOX1-209ENST00000560448 UBE2FQ969M7 185 aa12.21□□□□□ -0.45
PKNOX1-209ENST00000560448 ZNF837Q96EG3 531 aaPredicted RBP12.21□□□□□ -0.45
PKNOX1-209ENST00000560448 Q96M85 177 aa12.21□□□□□ -0.45
PKNOX1-209ENST00000560448 ERMAPQ96PL5 475 aaPredicted RBP12.21□□□□□ -0.45
PKNOX1-209ENST00000560448 C1orf198Q9H425 327 aa12.21□□□□□ -0.45
PKNOX1-209ENST00000560448 PLEKHF2Q9H8W4 249 aa12.21□□□□□ -0.45
PKNOX1-209ENST00000560448 SIAEQ9HAT2 523 aa12.21□□□□□ -0.45
PKNOX1-209ENST00000560448 AASSQ9UDR5 926 aa12.21□□□□□ -0.45
PKNOX1-209ENST00000560448 IER3IP1Q9Y5U9 82 aa12.21□□□□□ -0.45
PKNOX1-209ENST00000560448 NBPF19A0A087WUL8 3843 aa12.21□□□□□ -0.46
PKNOX1-209ENST00000560448 CACNA1DQ01668 2161 aa12.21□□□□□ -0.46
PKNOX1-209ENST00000560448 SLC22A23A1A5C7 686 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 PTHP01270 115 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 OSMP13725 252 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 CD40P25942 277 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 FMO3P31513 532 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 TEKQ02763 1124 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 BSPH1Q075Z2 132 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 PTGES3Q15185 160 aaKnown RBP12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 GSG1Q2KHT4 349 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 ZNF704Q6ZNC4 412 aaPredicted RBP12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 FOXL2NBQ6ZUU3 175 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 JAZF1Q86VZ6 243 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 WDFY1Q8IWB7 410 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 LNX2Q8N448 690 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 RHOXF1Q8NHV9 184 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 TEX47Q8TBZ9 253 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 DGCR14Q96DF8 476 aaKnown RBP12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 SAMD8Q96LT4 415 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 SLC38A2Q96QD8 506 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 KCNS3Q9BQ31 491 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 TEX12Q9BXU0 123 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 DUSP21Q9H596 190 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 CXorf56Q9H5V9 222 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 TBC1D23Q9NUY8 699 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 NPAP1Q9NZP6 1156 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 BLOC1S6Q9UL45 172 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 CEPT1Q9Y6K0 416 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 CELSR2Q9HCU4 2923 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 A0A096LPE4 126 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 A0A1W2PPZ6 126 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 DPRXA6NFQ7 191 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 BHLHE40O14503 412 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 PPP1R3DO95685 299 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 RENP00797 406 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 CRYAAP02489 173 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 PCBD1P61457 104 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 CNPY1Q3B7I2 92 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 FAM27BQ5VT28 67 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 KCTD8Q6ZWB6 473 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 SYT9Q86SS6 491 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 SPARTQ8N0X7 666 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 BPIFB6Q8NFQ5 453 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 FAIMQ9NVQ4 179 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 B3GNT2Q9NY97 397 aa12.2□□□□□ -0.46
PKNOX1-209ENST00000560448 H3BSA7 217 aa12.19□□□□□ -0.46
PKNOX1-209ENST00000560448 M0R1B8 84 aa12.19□□□□□ -0.46
PKNOX1-209ENST00000560448 ABCD4O14678 606 aa12.19□□□□□ -0.46
PKNOX1-209ENST00000560448 XPNPEP2O43895 674 aa12.19□□□□□ -0.46
PKNOX1-209ENST00000560448 KHDRBS3O75525 346 aaKnown RBP12.19□□□□□ -0.46
PKNOX1-209ENST00000560448 SLC2A10O95528 541 aa12.19□□□□□ -0.46
PKNOX1-209ENST00000560448 RAB36O95755 333 aa12.19□□□□□ -0.46
PKNOX1-209ENST00000560448 IFNGP01579 166 aa12.19□□□□□ -0.46
PKNOX1-209ENST00000560448 EEF1B2P24534 225 aaKnown RBP12.19□□□□□ -0.46
PKNOX1-209ENST00000560448 CAPZA2P47755 286 aa12.19□□□□□ -0.46
PKNOX1-209ENST00000560448 CENPAP49450 140 aa12.19□□□□□ -0.46
PKNOX1-209ENST00000560448 ZNF83P51522 516 aa12.19□□□□□ -0.46
PKNOX1-209ENST00000560448 CSNK2BP67870 215 aa12.19□□□□□ -0.46
PKNOX1-209ENST00000560448 SLC35A2P78381 396 aa12.19□□□□□ -0.46
PKNOX1-209ENST00000560448 SMN1Q16637 294 aaKnown RBP12.19□□□□□ -0.46
PKNOX1-209ENST00000560448 SLX4IPQ5VYV7 408 aa12.19□□□□□ -0.46
PKNOX1-209ENST00000560448 XAF1Q6GPH4 301 aa12.19□□□□□ -0.46
PKNOX1-209ENST00000560448 TMEM53Q6P2H8 277 aa12.19□□□□□ -0.46
PKNOX1-209ENST00000560448 PAMR1Q6UXH9 720 aa12.19□□□□□ -0.46
PKNOX1-209ENST00000560448 SLC16A14Q7RTX9 510 aa12.19□□□□□ -0.46
PKNOX1-209ENST00000560448 ZNF611Q8N823 705 aa12.19□□□□□ -0.46
PKNOX1-209ENST00000560448 FBXW5Q969U6 566 aa12.19□□□□□ -0.46
PKNOX1-209ENST00000560448 RASD2Q96D21 266 aa12.19□□□□□ -0.46
PKNOX1-209ENST00000560448 RACGAP1Q9H0H5 632 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms