RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 UBA52P62987 128 aaKnown RBP8.04□□□□□ -1.12
SMAD3-215ENST00000560424 CSNK2BP67870 215 aa8.04□□□□□ -1.12
SMAD3-215ENST00000560424 HOXC5Q00444 222 aa8.04□□□□□ -1.12
SMAD3-215ENST00000560424 MYBPC1Q00872 1141 aa8.04□□□□□ -1.12
SMAD3-215ENST00000560424 ZNF117Q03924 483 aa8.04□□□□□ -1.12
SMAD3-215ENST00000560424 CBFBQ13951 182 aa8.04□□□□□ -1.12
SMAD3-215ENST00000560424 EFNB3Q15768 340 aa8.04□□□□□ -1.12
SMAD3-215ENST00000560424 ZIK1Q3SY52 487 aaPredicted RBP8.04□□□□□ -1.12
SMAD3-215ENST00000560424 C1QTNF12Q5T7M4 302 aa8.04□□□□□ -1.12
SMAD3-215ENST00000560424 RPL13AP3Q6NVV1 102 aa8.04□□□□□ -1.12
SMAD3-215ENST00000560424 CBLN3Q6UW01 205 aa8.04□□□□□ -1.12
SMAD3-215ENST00000560424 C5orf46Q6UWT4 87 aa8.04□□□□□ -1.12
SMAD3-215ENST00000560424 CASP12Q6UXS9 341 aa8.04□□□□□ -1.12
SMAD3-215ENST00000560424 WDR88Q6ZMY6 472 aa8.04□□□□□ -1.12
SMAD3-215ENST00000560424 C1orf162Q8NEQ5 155 aaPredicted RBP8.04□□□□□ -1.12
SMAD3-215ENST00000560424 TRUB1Q8WWH5 349 aaKnown RBP8.04□□□□□ -1.12
SMAD3-215ENST00000560424 HDAC2Q92769 488 aaKnown RBP8.04□□□□□ -1.12
SMAD3-215ENST00000560424 MRGPRX4Q96LA9 322 aa8.04□□□□□ -1.12
SMAD3-215ENST00000560424 UNKLQ9H9P5 680 aaKnown RBP8.04□□□□□ -1.12
SMAD3-215ENST00000560424 SLC17A5Q9NRA2 495 aa8.04□□□□□ -1.12
SMAD3-215ENST00000560424 SERINC1Q9NRX5 453 aa8.04□□□□□ -1.12
SMAD3-215ENST00000560424 IL20Q9NYY1 176 aa8.04□□□□□ -1.12
SMAD3-215ENST00000560424 MALT1Q9UDY8 824 aa8.04□□□□□ -1.12
SMAD3-215ENST00000560424 CARD8Q9Y2G2 431 aa8.04□□□□□ -1.12
SMAD3-215ENST00000560424 MED31Q9Y3C7 131 aa8.04□□□□□ -1.12
SMAD3-215ENST00000560424 PPIAL4AQ9Y536 164 aa8.04□□□□□ -1.12
SMAD3-215ENST00000560424 GMPPBQ9Y5P6 360 aa8.04□□□□□ -1.12
SMAD3-215ENST00000560424 LOC105371242A0A075B767 164 aa8.03□□□□□ -1.12
SMAD3-215ENST00000560424 TRAV20A0A0B4J274 112 aa8.03□□□□□ -1.12
SMAD3-215ENST00000560424 TRIM64CA6NLI5 447 aa8.03□□□□□ -1.12
SMAD3-215ENST00000560424 SULT2B1O00204 365 aa8.03□□□□□ -1.12
SMAD3-215ENST00000560424 EFNA2O43921 213 aa8.03□□□□□ -1.12
SMAD3-215ENST00000560424 MRPS14O60783 128 aaKnown RBP8.03□□□□□ -1.12
SMAD3-215ENST00000560424 ITGA5P08648 1049 aa8.03□□□□□ -1.12
SMAD3-215ENST00000560424 SAGP10523 405 aaPredicted RBP8.03□□□□□ -1.12
SMAD3-215ENST00000560424 EPHA2P29317 976 aa8.03□□□□□ -1.12
SMAD3-215ENST00000560424 HTR3AP46098 478 aa8.03□□□□□ -1.12
SMAD3-215ENST00000560424 DIO1P49895 249 aa8.03□□□□□ -1.12
SMAD3-215ENST00000560424 CCR4P51679 360 aa8.03□□□□□ -1.12
SMAD3-215ENST00000560424 CDK5Q00535 292 aa8.03□□□□□ -1.12
SMAD3-215ENST00000560424 TOP3AQ13472 1001 aaPredicted RBP8.03□□□□□ -1.12
SMAD3-215ENST00000560424 RIN1Q13671 783 aa8.03□□□□□ -1.12
SMAD3-215ENST00000560424 BLMHQ13867 455 aa8.03□□□□□ -1.12
SMAD3-215ENST00000560424 PTGES3Q15185 160 aaKnown RBP8.03□□□□□ -1.12
SMAD3-215ENST00000560424 ADIPOQQ15848 244 aa8.03□□□□□ -1.12
SMAD3-215ENST00000560424 ANKDD1AQ495B1 522 aa8.03□□□□□ -1.12
SMAD3-215ENST00000560424 SLC25A53Q5H9E4 307 aa8.03□□□□□ -1.12
SMAD3-215ENST00000560424 RBM48Q5RL73 367 aaKnown RBP8.03□□□□□ -1.12
SMAD3-215ENST00000560424 SLC25A30Q5SVS4 291 aa8.03□□□□□ -1.12
SMAD3-215ENST00000560424 SLX4IPQ5VYV7 408 aa8.03□□□□□ -1.12
SMAD3-215ENST00000560424 C12orf73Q69YU5 71 aa8.03□□□□□ -1.12
SMAD3-215ENST00000560424 NRMQ8IXM6 262 aa8.03□□□□□ -1.12
SMAD3-215ENST00000560424 WDR31Q8NA23 367 aa8.03□□□□□ -1.12
SMAD3-215ENST00000560424 OR6S1Q8NH40 331 aa8.03□□□□□ -1.12
SMAD3-215ENST00000560424 GPR119Q8TDV5 335 aa8.03□□□□□ -1.12
SMAD3-215ENST00000560424 TMEM255BQ8WV15 326 aa8.03□□□□□ -1.12
SMAD3-215ENST00000560424 ST8SIA1Q92185 356 aa8.03□□□□□ -1.12
SMAD3-215ENST00000560424 SLC38A2Q96QD8 506 aa8.03□□□□□ -1.12
SMAD3-215ENST00000560424 MYCBPQ99417 103 aaPredicted RBP8.03□□□□□ -1.12
SMAD3-215ENST00000560424 GPA33Q99795 319 aa8.03□□□□□ -1.12
SMAD3-215ENST00000560424 RIBC2Q9H4K1 309 aa8.03□□□□□ -1.12
SMAD3-215ENST00000560424 SLC25A19Q9HC21 320 aa8.03□□□□□ -1.12
SMAD3-215ENST00000560424 MEPEQ9NQ76 525 aaPredicted RBP8.03□□□□□ -1.12
SMAD3-215ENST00000560424 CTPS2Q9NRF8 586 aa8.03□□□□□ -1.12
SMAD3-215ENST00000560424 SELENONQ9NZV5 590 aa8.03□□□□□ -1.12
SMAD3-215ENST00000560424 RPS6KB2Q9UBS0 482 aa8.03□□□□□ -1.12
SMAD3-215ENST00000560424 MYRFQ9Y2G1 1151 aa8.03□□□□□ -1.12
SMAD3-215ENST00000560424 NOTCH1P46531 2555 aa8.03□□□□□ -1.12
SMAD3-215ENST00000560424 IGKV3D-15A0A087WSY6 115 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 POM121CA8CG34 1229 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 OIP5O43482 229 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 FZD7O75084 574 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 CLIC3O95833 236 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 TFPIP10646 304 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 PRKCAP17252 672 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 GABRB1P18505 474 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 FKBP2P26885 142 aaKnown RBP8.02□□□□□ -1.13
SMAD3-215ENST00000560424 GIPRP48546 466 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 IDH2P48735 452 aaKnown RBP8.02□□□□□ -1.13
SMAD3-215ENST00000560424 SLC9A3P48764 834 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 GABARAPL2P60520 117 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 CDC42P60953 191 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 UBE2NP61088 152 aaKnown RBP8.02□□□□□ -1.13
SMAD3-215ENST00000560424 SNRPGP62308 76 aaKnown RBP8.02□□□□□ -1.13
SMAD3-215ENST00000560424 TUBA4AP68366 448 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 IL13RA1P78552 427 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 EFNB1P98172 346 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 CD47Q08722 323 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 MAD2L1BPQ15013 274 aaPredicted RBP8.02□□□□□ -1.13
SMAD3-215ENST00000560424 C6orf141Q5SZD1 244 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 TTC33Q6PID6 262 aaPredicted RBP8.02□□□□□ -1.13
SMAD3-215ENST00000560424 ZNF620Q6ZNG0 422 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 GRINAQ7Z429 371 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 CDK20Q8IZL9 346 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 ZCCHC24Q8N2G6 241 aaKnown RBP8.02□□□□□ -1.13
SMAD3-215ENST00000560424 ZDHHC22Q8N966 263 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 CLDND2Q8NHS1 167 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 RHOXF1Q8NHV9 184 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 NANPQ8TBE9 248 aa8.02□□□□□ -1.13
SMAD3-215ENST00000560424 TMEM234Q8WY98 164 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms