RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 HOPXQ9BPY8 73 aaPredicted RBP15.14■□□□□ 0.01
HDDC3-205ENST00000559898 MS4A5Q9H3V2 200 aa15.14■□□□□ 0.01
HDDC3-205ENST00000559898 POFUT1Q9H488 388 aa15.14■□□□□ 0.01
HDDC3-205ENST00000559898 EFCAB1Q9HAE3 211 aa15.14■□□□□ 0.01
HDDC3-205ENST00000559898 EMC7Q9NPA0 242 aa15.14■□□□□ 0.01
HDDC3-205ENST00000559898 MED4Q9NPJ6 270 aa15.14■□□□□ 0.01
HDDC3-205ENST00000559898 ABCD2Q9UBJ2 740 aa15.14■□□□□ 0.01
HDDC3-205ENST00000559898 IL20RAQ9UHF4 553 aa15.14■□□□□ 0.01
HDDC3-205ENST00000559898 FBXL3Q9UKT7 428 aa15.14■□□□□ 0.01
HDDC3-205ENST00000559898 IQCMA0A1B0GVH7 501 aa15.13■□□□□ 0.01
HDDC3-205ENST00000559898 A0A1W2PPL8 197 aa15.13■□□□□ 0.01
HDDC3-205ENST00000559898 CCDC22O60826 627 aa15.13■□□□□ 0.01
HDDC3-205ENST00000559898 SNAP29O95721 258 aa15.13■□□□□ 0.01
HDDC3-205ENST00000559898 NGFP01138 241 aa15.13■□□□□ 0.01
HDDC3-205ENST00000559898 ERCC1P07992 297 aaPredicted RBP15.13■□□□□ 0.01
HDDC3-205ENST00000559898 DRD4P21917 467 aa15.13■□□□□ 0.01
HDDC3-205ENST00000559898 STOMP27105 288 aa15.13■□□□□ 0.01
HDDC3-205ENST00000559898 SLC9A3P48764 834 aa15.13■□□□□ 0.01
HDDC3-205ENST00000559898 CDH15P55291 814 aa15.13■□□□□ 0.01
HDDC3-205ENST00000559898 NKPD1Q17RQ9 610 aa15.13■□□□□ 0.01
HDDC3-205ENST00000559898 NRN1LQ496H8 165 aa15.13■□□□□ 0.01
HDDC3-205ENST00000559898 THEM4Q5T1C6 240 aa15.13■□□□□ 0.01
HDDC3-205ENST00000559898 AVPI1Q5T686 147 aa15.13■□□□□ 0.01
HDDC3-205ENST00000559898 ZNF774Q6NX45 483 aa15.13■□□□□ 0.01
HDDC3-205ENST00000559898 HACD2Q6Y1H2 254 aa15.13■□□□□ 0.01
HDDC3-205ENST00000559898 THSD4Q6ZMP0 1018 aa15.13■□□□□ 0.01
HDDC3-205ENST00000559898 FOXL2NBQ6ZUU3 175 aa15.13■□□□□ 0.01
HDDC3-205ENST00000559898 MBOAT2Q6ZWT7 520 aa15.13■□□□□ 0.01
HDDC3-205ENST00000559898 ZNF540Q8NDQ6 660 aa15.13■□□□□ 0.01
HDDC3-205ENST00000559898 SPATA3Q8NHX4 192 aa15.13■□□□□ 0.01
HDDC3-205ENST00000559898 SLC7A13Q8TCU3 470 aa15.13■□□□□ 0.01
HDDC3-205ENST00000559898 RASD2Q96D21 266 aa15.13■□□□□ 0.01
HDDC3-205ENST00000559898 C1orf159Q96HA4 380 aa15.13■□□□□ 0.01
HDDC3-205ENST00000559898 GPA33Q99795 319 aa15.13■□□□□ 0.01
HDDC3-205ENST00000559898 KCTD14Q9BQ13 255 aaPredicted RBP15.13■□□□□ 0.01
HDDC3-205ENST00000559898 ALG12Q9BV10 488 aa15.13■□□□□ 0.01
HDDC3-205ENST00000559898 ZNF416Q9BWM5 594 aa15.13■□□□□ 0.01
HDDC3-205ENST00000559898 OR2H1Q9GZK4 316 aa15.13■□□□□ 0.01
HDDC3-205ENST00000559898 NMNAT1Q9HAN9 279 aaPredicted RBP15.13■□□□□ 0.01
HDDC3-205ENST00000559898 LPAR2Q9HBW0 351 aa15.13■□□□□ 0.01
HDDC3-205ENST00000559898 CCNB1IP1Q9NPC3 277 aa15.13■□□□□ 0.01
HDDC3-205ENST00000559898 TREM2Q9NZC2 230 aa15.13■□□□□ 0.01
HDDC3-205ENST00000559898 ENPP4Q9Y6X5 453 aa15.13■□□□□ 0.01
HDDC3-205ENST00000559898 V9GYQ6 96 aa15.13■□□□□ 0.01
HDDC3-205ENST00000559898 TRBV4-1A0A0J9YWV2 114 aa15.12■□□□□ 0.01
HDDC3-205ENST00000559898 C5orf49A4QMS7 147 aa15.12■□□□□ 0.01
HDDC3-205ENST00000559898 C17orf100A8MU93 164 aa15.12■□□□□ 0.01
HDDC3-205ENST00000559898 MPZL1O95297 269 aa15.12■□□□□ 0.01
HDDC3-205ENST00000559898 GPANK1O95872 356 aa15.12■□□□□ 0.01
HDDC3-205ENST00000559898 IFNA2P01563 188 aa15.12■□□□□ 0.01
HDDC3-205ENST00000559898 SRD5A1P18405 259 aa15.12■□□□□ 0.01
HDDC3-205ENST00000559898 LSP1P33241 339 aa15.12■□□□□ 0.01
HDDC3-205ENST00000559898 APLNRP35414 380 aa15.12■□□□□ 0.01
HDDC3-205ENST00000559898 MSX2P35548 267 aaPredicted RBP15.12■□□□□ 0.01
HDDC3-205ENST00000559898 KLF3P57682 345 aaPredicted RBP15.12■□□□□ 0.01
HDDC3-205ENST00000559898 PLP2Q04941 152 aa15.12■□□□□ 0.01
HDDC3-205ENST00000559898 TSTQ16762 297 aaKnown RBP15.12■□□□□ 0.01
HDDC3-205ENST00000559898 FAM27BQ5VT28 67 aa15.12■□□□□ 0.01
HDDC3-205ENST00000559898 FAM122BQ7Z309 247 aa15.12■□□□□ 0.01
HDDC3-205ENST00000559898 SLC25A40Q8TBP6 338 aa15.12■□□□□ 0.01
HDDC3-205ENST00000559898 IPCEF1Q8WWN9 437 aaPredicted RBP15.12■□□□□ 0.01
HDDC3-205ENST00000559898 RDH5Q92781 318 aa15.12■□□□□ 0.01
HDDC3-205ENST00000559898 C7orf34Q96L11 122 aa15.12■□□□□ 0.01
HDDC3-205ENST00000559898 RACGAP1Q9H0H5 632 aa15.12■□□□□ 0.01
HDDC3-205ENST00000559898 SMURF2Q9HAU4 748 aa15.12■□□□□ 0.01
HDDC3-205ENST00000559898 HINT3Q9NQE9 182 aaKnown RBP15.12■□□□□ 0.01
HDDC3-205ENST00000559898 NDUFAF4Q9P032 175 aa15.12■□□□□ 0.01
HDDC3-205ENST00000559898 FBXO9Q9UK97 447 aaPredicted RBP15.12■□□□□ 0.01
HDDC3-205ENST00000559898 PTP4A3O75365 173 aa15.11■□□□□ 0.01
HDDC3-205ENST00000559898 ACHEP22303 614 aa15.11■□□□□ 0.01
HDDC3-205ENST00000559898 GPR6P46095 362 aaPredicted RBP15.11■□□□□ 0.01
HDDC3-205ENST00000559898 ZBED5Q49AG3 693 aa15.11■□□□□ 0.01
HDDC3-205ENST00000559898 GLYATQ6IB77 296 aa15.11■□□□□ 0.01
HDDC3-205ENST00000559898 TMPRSS11FQ6ZWK6 438 aa15.11■□□□□ 0.01
HDDC3-205ENST00000559898 HDDC2Q7Z4H3 204 aa15.11■□□□□ 0.01
HDDC3-205ENST00000559898 LINC01356Q8N9X3 169 aa15.11■□□□□ 0.01
HDDC3-205ENST00000559898 C11orf40Q8WZ69 217 aa15.11■□□□□ 0.01
HDDC3-205ENST00000559898 SLC7A6Q92536 515 aa15.11■□□□□ 0.01
HDDC3-205ENST00000559898 MARS2Q96GW9 593 aaKnown RBP15.11■□□□□ 0.01
HDDC3-205ENST00000559898 RBP7Q96R05 134 aa15.11■□□□□ 0.01
HDDC3-205ENST00000559898 OR2J1Q9GZK6 312 aa15.11■□□□□ 0.01
HDDC3-205ENST00000559898 LPAR3Q9UBY5 353 aa15.11■□□□□ 0.01
HDDC3-205ENST00000559898 AP3M1Q9Y2T2 418 aa15.11■□□□□ 0.01
HDDC3-205ENST00000559898 ARHGAP32A7KAX9 2087 aa15.1■□□□□ 0.01
HDDC3-205ENST00000559898 TEX13CA0A0J9YWL9 993 aa15.1■□□□□ 0.01
HDDC3-205ENST00000559898 SLC22A23A1A5C7 686 aa15.1■□□□□ 0.01
HDDC3-205ENST00000559898 ZSCAN5BA6NJL1 495 aa15.1■□□□□ 0.01
HDDC3-205ENST00000559898 PPIHO43447 177 aaKnown RBP15.1■□□□□ 0.01
HDDC3-205ENST00000559898 CST2P09228 141 aa15.1■□□□□ 0.01
HDDC3-205ENST00000559898 CTLA4P16410 223 aa15.1■□□□□ 0.01
HDDC3-205ENST00000559898 RAD52P43351 418 aa15.1■□□□□ 0.01
HDDC3-205ENST00000559898 OMPP47874 163 aa15.1■□□□□ 0.01
HDDC3-205ENST00000559898 LIMS1P48059 325 aa15.1■□□□□ 0.01
HDDC3-205ENST00000559898 LMO4P61968 165 aa15.1■□□□□ 0.01
HDDC3-205ENST00000559898 MVKQ03426 396 aa15.1■□□□□ 0.01
HDDC3-205ENST00000559898 TAF11Q15544 211 aa15.1■□□□□ 0.01
HDDC3-205ENST00000559898 PTCHD4Q6ZW05 846 aa15.1■□□□□ 0.01
HDDC3-205ENST00000559898 ZNF771Q7L3S4 317 aaPredicted RBP15.1■□□□□ 0.01
HDDC3-205ENST00000559898 DPPA2Q7Z7J5 298 aa15.1■□□□□ 0.01
HDDC3-205ENST00000559898 OR1J2Q8NGS2 313 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms