RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 AWAT1Q58HT5 328 aa11.1□□□□□ -0.63
TPM1-220ENST00000559556 BEND6Q5SZJ8 279 aaPredicted RBP11.1□□□□□ -0.63
TPM1-220ENST00000559556 SPATA46Q5T0L3 261 aa11.1□□□□□ -0.63
TPM1-220ENST00000559556 MBNL2Q5VZF2 373 aaKnown RBP11.1□□□□□ -0.63
TPM1-220ENST00000559556 UNQ6126/PRO20091Q6UXV3 157 aa11.1□□□□□ -0.63
TPM1-220ENST00000559556 RFPL4BQ6ZWI9 263 aa11.1□□□□□ -0.63
TPM1-220ENST00000559556 C1orf174Q8IYL3 243 aa11.1□□□□□ -0.63
TPM1-220ENST00000559556 BPIFB2Q8N4F0 458 aa11.1□□□□□ -0.63
TPM1-220ENST00000559556 PFN4Q8NHR9 129 aa11.1□□□□□ -0.63
TPM1-220ENST00000559556 SLC26A7Q8TE54 656 aa11.1□□□□□ -0.63
TPM1-220ENST00000559556 TSPEARQ8WU66 669 aa11.1□□□□□ -0.63
TPM1-220ENST00000559556 POLR2J2Q9GZM3 115 aaKnown RBP11.1□□□□□ -0.63
TPM1-220ENST00000559556 POLR2J3Q9H1A7 115 aaKnown RBP11.1□□□□□ -0.63
TPM1-220ENST00000559556 KCNN2Q9H2S1 579 aa11.1□□□□□ -0.63
TPM1-220ENST00000559556 NANOGQ9H9S0 305 aa11.1□□□□□ -0.63
TPM1-220ENST00000559556 CCNB1IP1Q9NPC3 277 aa11.1□□□□□ -0.63
TPM1-220ENST00000559556 PPIAL4EA0A075B759 164 aa11.09□□□□□ -0.63
TPM1-220ENST00000559556 IGKV1D-43A0A0B4J1Z2 117 aa11.09□□□□□ -0.63
TPM1-220ENST00000559556 PPIAL4CA0A0B4J2A2 164 aa11.09□□□□□ -0.63
TPM1-220ENST00000559556 C5orf49A4QMS7 147 aa11.09□□□□□ -0.63
TPM1-220ENST00000559556 GMNCA6NCL1 334 aa11.09□□□□□ -0.63
TPM1-220ENST00000559556 ZSCAN5BA6NJL1 495 aa11.09□□□□□ -0.63
TPM1-220ENST00000559556 PPIAL4DF5H284 164 aa11.09□□□□□ -0.63
TPM1-220ENST00000559556 PRSS23O95084 383 aa11.09□□□□□ -0.63
TPM1-220ENST00000559556 PPIAL4FP0DN26 164 aa11.09□□□□□ -0.63
TPM1-220ENST00000559556 NR2C1P13056 603 aa11.09□□□□□ -0.63
TPM1-220ENST00000559556 FUT1P19526 365 aa11.09□□□□□ -0.63
TPM1-220ENST00000559556 CCNOP22674 350 aa11.09□□□□□ -0.63
TPM1-220ENST00000559556 AQP2P41181 271 aa11.09□□□□□ -0.63
TPM1-220ENST00000559556 GZMMP51124 257 aa11.09□□□□□ -0.63
TPM1-220ENST00000559556 UBA52P62987 128 aaKnown RBP11.09□□□□□ -0.63
TPM1-220ENST00000559556 SLC3A1Q07837 685 aa11.09□□□□□ -0.63
TPM1-220ENST00000559556 CD47Q08722 323 aa11.09□□□□□ -0.63
TPM1-220ENST00000559556 VMACQ2NL98 169 aa11.09□□□□□ -0.63
TPM1-220ENST00000559556 THEM4Q5T1C6 240 aa11.09□□□□□ -0.63
TPM1-220ENST00000559556 NKAIN4Q8IVV8 208 aa11.09□□□□□ -0.63
TPM1-220ENST00000559556 OR10A6Q8NH74 314 aa11.09□□□□□ -0.63
TPM1-220ENST00000559556 SLC25A40Q8TBP6 338 aa11.09□□□□□ -0.63
TPM1-220ENST00000559556 KLF14Q8TD94 323 aaPredicted RBP11.09□□□□□ -0.63
TPM1-220ENST00000559556 TMEM255BQ8WV15 326 aa11.09□□□□□ -0.63
TPM1-220ENST00000559556 CCL17Q92583 94 aa11.09□□□□□ -0.63
TPM1-220ENST00000559556 HDAC2Q92769 488 aaKnown RBP11.09□□□□□ -0.63
TPM1-220ENST00000559556 DVL3Q92997 716 aaPredicted RBP11.09□□□□□ -0.63
TPM1-220ENST00000559556 SGTBQ96EQ0 304 aa11.09□□□□□ -0.63
TPM1-220ENST00000559556 OR2J1Q9GZK6 312 aa11.09□□□□□ -0.63
TPM1-220ENST00000559556 EGLN1Q9GZT9 426 aa11.09□□□□□ -0.63
TPM1-220ENST00000559556 TXNIPQ9H3M7 391 aa11.09□□□□□ -0.63
TPM1-220ENST00000559556 C7orf69Q9H7B7 122 aa11.09□□□□□ -0.63
TPM1-220ENST00000559556 CYSLTR2Q9NS75 346 aa11.09□□□□□ -0.63
TPM1-220ENST00000559556 C20orf141Q9NUB4 165 aa11.09□□□□□ -0.63
TPM1-220ENST00000559556 ZDHHC8Q9ULC8 765 aa11.09□□□□□ -0.63
TPM1-220ENST00000559556 SPRY3O43610 288 aa11.08□□□□□ -0.64
TPM1-220ENST00000559556 OR5F1O95221 314 aa11.08□□□□□ -0.64
TPM1-220ENST00000559556 IGHMP01871 453 aa11.08□□□□□ -0.64
TPM1-220ENST00000559556 CD55P08174 381 aa11.08□□□□□ -0.64
TPM1-220ENST00000559556 LIPAP38571 399 aa11.08□□□□□ -0.64
TPM1-220ENST00000559556 GDI2P50395 445 aaKnown RBP11.08□□□□□ -0.64
TPM1-220ENST00000559556 TAS2R41P59536 307 aa11.08□□□□□ -0.64
TPM1-220ENST00000559556 ERVK-25P63136 954 aa11.08□□□□□ -0.64
TPM1-220ENST00000559556 LCN2P80188 198 aa11.08□□□□□ -0.64
TPM1-220ENST00000559556 PSG4Q00888 419 aa11.08□□□□□ -0.64
TPM1-220ENST00000559556 NFYCQ13952 458 aa11.08□□□□□ -0.64
TPM1-220ENST00000559556 ZMAT1Q5H9K5 638 aa11.08□□□□□ -0.64
TPM1-220ENST00000559556 FAM27BQ5VT28 67 aa11.08□□□□□ -0.64
TPM1-220ENST00000559556 SLC25A47Q6Q0C1 308 aa11.08□□□□□ -0.64
TPM1-220ENST00000559556 HDXQ7Z353 690 aa11.08□□□□□ -0.64
TPM1-220ENST00000559556 AKR7LQ8NHP1 331 aa11.08□□□□□ -0.64
TPM1-220ENST00000559556 MOSPD2Q8NHP6 518 aa11.08□□□□□ -0.64
TPM1-220ENST00000559556 TMEM239Q8WW34 195 aa11.08□□□□□ -0.64
TPM1-220ENST00000559556 DIRC2Q96SL1 478 aa11.08□□□□□ -0.64
TPM1-220ENST00000559556 WNT5BQ9H1J7 359 aa11.08□□□□□ -0.64
TPM1-220ENST00000559556 NTN4Q9HB63 628 aa11.08□□□□□ -0.64
TPM1-220ENST00000559556 EIF3KQ9UBQ5 218 aaKnown RBP11.08□□□□□ -0.64
TPM1-220ENST00000559556 RIMS3Q9UJD0 308 aa11.08□□□□□ -0.64
TPM1-220ENST00000559556 KLHL21Q9UJP4 597 aa11.08□□□□□ -0.64
TPM1-220ENST00000559556 HIF3AQ9Y2N7 669 aa11.08□□□□□ -0.64
TPM1-220ENST00000559556 SH3GLB1Q9Y371 365 aa11.08□□□□□ -0.64
TPM1-220ENST00000559556 ISPDA4D126 451 aa11.07□□□□□ -0.64
TPM1-220ENST00000559556 ATP8B1O43520 1251 aa11.07□□□□□ -0.64
TPM1-220ENST00000559556 IGHV2-70P01814 119 aa11.07□□□□□ -0.64
TPM1-220ENST00000559556 CST2P09228 141 aa11.07□□□□□ -0.64
TPM1-220ENST00000559556 THRBP10828 461 aa11.07□□□□□ -0.64
TPM1-220ENST00000559556 FPR2P25090 351 aa11.07□□□□□ -0.64
TPM1-220ENST00000559556 PPP1CBP62140 327 aa11.07□□□□□ -0.64
TPM1-220ENST00000559556 TAF11Q15544 211 aa11.07□□□□□ -0.64
TPM1-220ENST00000559556 SGCAQ16586 387 aa11.07□□□□□ -0.64
TPM1-220ENST00000559556 SPRNQ5BIV9 151 aa11.07□□□□□ -0.64
TPM1-220ENST00000559556 FOXL2NBQ6ZUU3 175 aa11.07□□□□□ -0.64
TPM1-220ENST00000559556 CALHM3Q86XJ0 350 aa11.07□□□□□ -0.64
TPM1-220ENST00000559556 ALDH16A1Q8IZ83 802 aa11.07□□□□□ -0.64
TPM1-220ENST00000559556 ABHD4Q8TB40 342 aa11.07□□□□□ -0.64
TPM1-220ENST00000559556 FNDC8Q8TC99 324 aa11.07□□□□□ -0.64
TPM1-220ENST00000559556 ST7LQ8TDW4 575 aa11.07□□□□□ -0.64
TPM1-220ENST00000559556 GEMIN6Q8WXD5 167 aaKnown RBP11.07□□□□□ -0.64
TPM1-220ENST00000559556 POP5Q969H6 163 aaKnown RBP11.07□□□□□ -0.64
TPM1-220ENST00000559556 ALG12Q9BV10 488 aa11.07□□□□□ -0.64
TPM1-220ENST00000559556 OR2H1Q9GZK4 316 aa11.07□□□□□ -0.64
TPM1-220ENST00000559556 BAG5Q9UL15 447 aa11.07□□□□□ -0.64
TPM1-220ENST00000559556 POLR3KQ9Y2Y1 108 aaPredicted RBP11.07□□□□□ -0.64
TPM1-220ENST00000559556 NPTNQ9Y639 398 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms