RNA–Protein interactions for RNA: ENST00000558943.5

SPG21-208, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-208ENST00000558943 GPAT4Q86UL3 456 aa3.94□□□□□ -1.78
SPG21-208ENST00000558943 MDP1Q86V88 176 aa3.94□□□□□ -1.78
SPG21-208ENST00000558943 MYPOPQ86VE0 399 aaPredicted RBP3.94□□□□□ -1.78
SPG21-208ENST00000558943 VSTM4Q8IW00 320 aa3.94□□□□□ -1.78
SPG21-208ENST00000558943 ZNF614Q8N883 585 aa3.94□□□□□ -1.78
SPG21-208ENST00000558943 COX18Q8N8Q8 333 aa3.94□□□□□ -1.78
SPG21-208ENST00000558943 NAT8LQ8N9F0 302 aa3.94□□□□□ -1.78
SPG21-208ENST00000558943 SYNPRQ8TBG9 265 aa3.94□□□□□ -1.78
SPG21-208ENST00000558943 SELENOMQ8WWX9 145 aa3.94□□□□□ -1.78
SPG21-208ENST00000558943 LRTOMTQ8WZ04 291 aa3.94□□□□□ -1.78
SPG21-208ENST00000558943 C11orf40Q8WZ69 217 aa3.94□□□□□ -1.78
SPG21-208ENST00000558943 ST8SIA1Q92185 356 aa3.94□□□□□ -1.78
SPG21-208ENST00000558943 UBXN10Q96LJ8 280 aa3.94□□□□□ -1.78
SPG21-208ENST00000558943 AMDHD1Q96NU7 426 aa3.94□□□□□ -1.78
SPG21-208ENST00000558943 RHOJQ9H4E5 214 aa3.94□□□□□ -1.78
SPG21-208ENST00000558943 GLIPR2Q9H4G4 154 aa3.94□□□□□ -1.78
SPG21-208ENST00000558943 PATZ1Q9HBE1 687 aaKnown RBP3.94□□□□□ -1.78
SPG21-208ENST00000558943 MIEF1Q9NQG6 463 aa3.94□□□□□ -1.78
SPG21-208ENST00000558943 PAPOLBQ9NRJ5 636 aaKnown RBP3.94□□□□□ -1.78
SPG21-208ENST00000558943 ACER3Q9NUN7 267 aa3.94□□□□□ -1.78
SPG21-208ENST00000558943 GIN1Q9NXP7 522 aa3.94□□□□□ -1.78
SPG21-208ENST00000558943 VPS29Q9UBQ0 182 aa3.94□□□□□ -1.78
SPG21-208ENST00000558943 STEAP1Q9UHE8 339 aa3.94□□□□□ -1.78
SPG21-208ENST00000558943 RPUSD1Q9UJJ7 312 aaKnown RBP3.94□□□□□ -1.78
SPG21-208ENST00000558943 SNX6Q9UNH7 406 aa3.94□□□□□ -1.78
SPG21-208ENST00000558943 PSAT1Q9Y617 370 aa3.94□□□□□ -1.78
SPG21-208ENST00000558943 CACNG2Q9Y698 323 aa3.94□□□□□ -1.78
SPG21-208ENST00000558943 DSPPQ9NZW4 1301 aa3.94□□□□□ -1.78
SPG21-208ENST00000558943 ARFGEF3Q5TH69 2177 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 KIR2DS1A0A191URI9 304 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 OR7A17O14581 309 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 RGS10O43665 173 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 PCDH7O60245 1069 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 BANF1O75531 89 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 UPK3AO75631 287 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 TIPRLO75663 272 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 CLPTM1O96005 669 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 PDYNP01213 254 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 ANXA4P09525 319 aaPredicted RBP3.93□□□□□ -1.78
SPG21-208ENST00000558943 UROSP10746 265 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 UBL4AP11441 157 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 ZNF35P13682 527 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 ATP6V1B1P15313 513 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 TSPAN8P19075 237 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 STX2P32856 288 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 ELK3P41970 407 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 CDKN2AP42771 156 aaKnown RBP3.93□□□□□ -1.78
SPG21-208ENST00000558943 ASMTP46597 345 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 IER3P46695 156 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 ALDH18A1P54886 795 aaKnown RBP3.93□□□□□ -1.78
SPG21-208ENST00000558943 KLF3P57682 345 aaPredicted RBP3.93□□□□□ -1.78
SPG21-208ENST00000558943 CTAG1AP78358 180 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 TXNL4AP83876 142 aaKnown RBP3.93□□□□□ -1.78
SPG21-208ENST00000558943 H3F3AP84243 136 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 ROR2Q01974 943 aaKnown RBP3.93□□□□□ -1.78
SPG21-208ENST00000558943 PIN1Q13526 163 aaPredicted RBP3.93□□□□□ -1.78
SPG21-208ENST00000558943 GSG1Q2KHT4 349 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 NDUFAF6Q330K2 333 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 HHATQ5VTY9 493 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 NIPAL3Q6P499 406 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 ZCCHC12Q6PEW1 402 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 C6orf89Q6UWU4 347 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 PDIK1LQ8N165 341 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 LYG1Q8N1E2 194 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 LSMEM1Q8N8F7 131 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 ZIC4Q8N9L1 334 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 SPERTQ8NA61 448 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 WFDC9Q8NEX5 89 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 Q8NFD4 153 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 OR9K2Q8NGE7 335 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 CDC26Q8NHZ8 85 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 KIF18AQ8NI77 898 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 ZNF563Q8TA94 476 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 C16orf78Q8WTQ4 265 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 RAB40AQ8WXH6 277 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 ZNF524Q96C55 264 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 DDIT4LQ96D03 193 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 NMD3Q96D46 503 aaKnown RBP3.93□□□□□ -1.78
SPG21-208ENST00000558943 THOC1Q96FV9 657 aaKnown RBP3.93□□□□□ -1.78
SPG21-208ENST00000558943 ZNF385AQ96PM9 386 aaKnown RBP3.93□□□□□ -1.78
SPG21-208ENST00000558943 ALKBH3Q96Q83 286 aaPredicted RBP3.93□□□□□ -1.78
SPG21-208ENST00000558943 ATOH8Q96SQ7 321 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 SH3GL3Q99963 347 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 NUDT16L1Q9BRJ7 211 aaKnown RBP3.93□□□□□ -1.78
SPG21-208ENST00000558943 SF3B5Q9BWJ5 86 aaKnown RBP3.93□□□□□ -1.78
SPG21-208ENST00000558943 TRIM15Q9C019 465 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 MMP28Q9H239 520 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 BRF2Q9HAW0 419 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 FARSBQ9NSD9 589 aaKnown RBP3.93□□□□□ -1.78
SPG21-208ENST00000558943 ARGLU1Q9NWB6 273 aaPredicted RBP3.93□□□□□ -1.78
SPG21-208ENST00000558943 CHRNA9Q9UGM1 479 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 FAM96BQ9Y3D0 163 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 DTNAQ9Y4J8 743 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 NPTNQ9Y639 398 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 USH1CQ9Y6N9 552 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 DYNC2H1Q8NCM8 4307 aaKnown RBP3.93□□□□□ -1.78
SPG21-208ENST00000558943 NOTCH3Q9UM47 2321 aa3.93□□□□□ -1.78
SPG21-208ENST00000558943 IGHV2-70DA0A0C4DH43 119 aa3.92□□□□□ -1.78
SPG21-208ENST00000558943 PLSCR5A0PG75 271 aa3.92□□□□□ -1.78
SPG21-208ENST00000558943 A8MXK9 166 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms