RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 ZP4Q12836 540 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 STX3Q13277 289 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 PMS2P3Q13401 168 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 RGNQ15493 299 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 KRT71Q3SY84 523 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 C6orf10Q5SRN2 563 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 TMEM154Q6P9G4 183 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 WDR88Q6ZMY6 472 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 USP51Q70EK9 711 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 NET1Q7Z628 596 aaPredicted RBP8.19□□□□□ -1.1
SPG11-212ENST00000558790 ZBTB46Q86UZ6 589 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 SNX32Q86XE0 403 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 SKA3Q8IX90 412 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 MIER2Q8N344 545 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 SLC30A7Q8NEW0 376 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 NANPQ8TBE9 248 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 AENQ8WTP8 325 aaKnown RBP8.19□□□□□ -1.1
SPG11-212ENST00000558790 SNX33Q8WV41 574 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 DNAJA4Q8WW22 397 aaPredicted RBP8.19□□□□□ -1.1
SPG11-212ENST00000558790 ITCHQ96J02 903 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 ZNF747Q9BV97 191 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 KRTAP9-2Q9BYQ4 174 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 ZNF696Q9H7X3 374 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 BCL2L10Q9HD36 194 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 THUMPD1Q9NXG2 353 aaKnown RBP8.19□□□□□ -1.1
SPG11-212ENST00000558790 MRPL39Q9NYK5 338 aaKnown RBP8.19□□□□□ -1.1
SPG11-212ENST00000558790 TESQ9UGI8 421 aaKnown RBP8.19□□□□□ -1.1
SPG11-212ENST00000558790 OPN4Q9UHM6 478 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 WIPI2Q9Y4P8 454 aa8.19□□□□□ -1.1
SPG11-212ENST00000558790 A0A0B4J2E0 115 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 A0A1B0GX12 115 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 C11orf98E9PRG8 122 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 PLPP3O14495 311 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 HDAC3O15379 428 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 TPST1O60507 370 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 BCL10O95999 233 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 HKR1P10072 659 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 ETS2P15036 469 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 ZNF250P15622 560 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 HOXB9P17482 250 aaPredicted RBP8.18□□□□□ -1.1
SPG11-212ENST00000558790 AHCYP23526 432 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 CRYBB2P43320 205 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 RAD52P43351 418 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 BIDP55957 195 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 RBBP4Q09028 425 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 HNRNPA0Q13151 305 aaKnown RBP8.18□□□□□ -1.1
SPG11-212ENST00000558790 FADDQ13158 208 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 ODF1Q14990 250 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 PCGF3Q3KNV8 242 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 MMEL1Q495T6 779 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 FAM91A1Q658Y4 838 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 ULK3Q6PHR2 472 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 DHRS4L2Q6PKH6 230 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 MSANTD1Q6ZTZ1 278 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 PXKQ7Z7A4 578 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 GLB1L2Q8IW92 636 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 C10orf111Q8N326 155 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 SLC22A24Q8N4F4 322 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 ICA1LQ8NDH6 482 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 OR6S1Q8NH40 331 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 NFKBIDQ8NI38 313 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 SYNPRQ8TBG9 265 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 DUX5Q96PT3 197 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 EPYCQ99645 322 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 SH3GL3Q99963 347 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 WFDC6Q9BQY6 131 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 C1QTNF5Q9BXJ0 243 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 PAIP1Q9H074 479 aaKnown RBP8.18□□□□□ -1.1
SPG11-212ENST00000558790 RMND5AQ9H871 391 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 SAP30LQ9HAJ7 183 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 TCF7L2Q9NQB0 619 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 SDR39U1Q9NRG7 319 aaPredicted RBP8.18□□□□□ -1.1
SPG11-212ENST00000558790 TMEM38BQ9NVV0 291 aa8.18□□□□□ -1.1
SPG11-212ENST00000558790 DNAJC9-AS1A6NH13 148 aa8.17□□□□□ -1.1
SPG11-212ENST00000558790 TRPC5OSA6NMA1 111 aa8.17□□□□□ -1.1
SPG11-212ENST00000558790 ZNF726A6NNF4 738 aa8.17□□□□□ -1.1
SPG11-212ENST00000558790 C5orf58C9J3I9 102 aa8.17□□□□□ -1.1
SPG11-212ENST00000558790 CLIC1O00299 241 aa8.17□□□□□ -1.1
SPG11-212ENST00000558790 RGS16O15492 202 aaPredicted RBP8.17□□□□□ -1.1
SPG11-212ENST00000558790 TPD52L2O43399 206 aaKnown RBP8.17□□□□□ -1.1
SPG11-212ENST00000558790 TPST2O60704 377 aa8.17□□□□□ -1.1
SPG11-212ENST00000558790 SNAP29O95721 258 aa8.17□□□□□ -1.1
SPG11-212ENST00000558790 LCKP06239 509 aa8.17□□□□□ -1.1
SPG11-212ENST00000558790 ADORA3P0DMS8 318 aa8.17□□□□□ -1.1
SPG11-212ENST00000558790 KITP10721 976 aa8.17□□□□□ -1.1
SPG11-212ENST00000558790 MAKP20794 623 aa8.17□□□□□ -1.1
SPG11-212ENST00000558790 GATA3P23771 443 aa8.17□□□□□ -1.1
SPG11-212ENST00000558790 POLR2JP52435 117 aaKnown RBP8.17□□□□□ -1.1
SPG11-212ENST00000558790 RGS8P57771 180 aaPredicted RBP8.17□□□□□ -1.1
SPG11-212ENST00000558790 LCN2P80188 198 aa8.17□□□□□ -1.1
SPG11-212ENST00000558790 MELKQ14680 651 aa8.17□□□□□ -1.1
SPG11-212ENST00000558790 TSTQ16762 297 aaKnown RBP8.17□□□□□ -1.1
SPG11-212ENST00000558790 KRTAP19-4Q3LI73 84 aa8.17□□□□□ -1.1
SPG11-212ENST00000558790 TMEM255AQ5JRV8 349 aa8.17□□□□□ -1.1
SPG11-212ENST00000558790 NXNQ6DKJ4 435 aa8.17□□□□□ -1.1
SPG11-212ENST00000558790 SLC2A7Q6PXP3 512 aa8.17□□□□□ -1.1
SPG11-212ENST00000558790 PIWIL3Q7Z3Z3 882 aaKnown RBP8.17□□□□□ -1.1
SPG11-212ENST00000558790 MAVSQ7Z434 540 aa8.17□□□□□ -1.1
SPG11-212ENST00000558790 C10orf53Q8N6V4 93 aa8.17□□□□□ -1.1
SPG11-212ENST00000558790 SIGLECL1Q8N7X8 197 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms