RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 IDNKQ5T6J7 187 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 CPTPQ5TA50 214 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 LYPLAL1Q5VWZ2 237 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 WSCD1Q658N2 575 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 ZNF324BQ6AW86 544 aaPredicted RBP2.89□□□□□ -1.95
HERC1-203ENST00000558532 DMKNQ6E0U4 476 aaPredicted RBP2.89□□□□□ -1.95
HERC1-203ENST00000558532 ADNP2Q6IQ32 1131 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 REEP3Q6NUK4 255 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 ACSM5Q6NUN0 579 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 RPL13AP3Q6NVV1 102 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 FAM199XQ6PEV8 388 aaPredicted RBP2.89□□□□□ -1.95
HERC1-203ENST00000558532 LRRN1Q6UXK5 716 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 RBMS3Q6XE24 437 aaKnown RBP2.89□□□□□ -1.95
HERC1-203ENST00000558532 ZNF852Q6ZMS4 543 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 FAM83HQ6ZRV2 1179 aaPredicted RBP2.89□□□□□ -1.95
HERC1-203ENST00000558532 TMPRSS11FQ6ZWK6 438 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 LINGO2Q7L985 606 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 OR2W3Q7Z3T1 314 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 GLT6D1Q7Z4J2 308 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 SCD5Q86SK9 330 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 MON1AQ86VX9 555 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 PARGQ86W56 976 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 CBLN2Q8IUK8 224 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 SERPINA12Q8IW75 414 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 RBMXL3Q8N7X1 1067 aaKnown RBP2.89□□□□□ -1.95
HERC1-203ENST00000558532 POMGNT2Q8NAT1 580 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 BEST4Q8NFU0 473 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 OR2AK2Q8NG84 335 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 OR4A4PQ8NGN8 299 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 OR52J3Q8NH60 311 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 NFKBIDQ8NI38 313 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 LKAAEAR1Q8TD35 194 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 CXorf40AQ8TE69 158 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 C15orf40Q8WUR7 153 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 SPRYD4Q8WW59 207 aaPredicted RBP2.89□□□□□ -1.95
HERC1-203ENST00000558532 SORCS1Q8WY21 1168 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 PHYHIPQ92561 330 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 OSTF1Q92882 214 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 NEURL3Q96EH8 262 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 WDR34Q96EX3 536 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 PRRC1Q96M27 445 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 C12orf66Q96MD2 445 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 KLHL5Q96PQ7 755 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 C2orf88Q9BSF0 95 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 ZNF426Q9BUY5 554 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 TRMT61BQ9BVS5 477 aaKnown RBP2.89□□□□□ -1.95
HERC1-203ENST00000558532 KRTAP2-2Q9BYT5 123 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 NPFFR1Q9GZQ6 430 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 WDR13Q9H1Z4 485 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 REEP4Q9H6H4 257 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 MVB12BQ9H7P6 319 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 AUNIPQ9H7T9 357 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 MYNNQ9NPC7 610 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 TMEM138Q9NPI0 162 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 TAS2R3Q9NYW6 316 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 KLHL9Q9P2J3 617 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 VPS29Q9UBQ0 182 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 GHRLQ9UBU3 117 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 WNT16Q9UBV4 365 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 ZNF629Q9UEG4 869 aaPredicted RBP2.89□□□□□ -1.95
HERC1-203ENST00000558532 TNFSF18Q9UNG2 199 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 RASD1Q9Y272 281 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 TP53TG5Q9Y2B4 290 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 PCDHGA5Q9Y5G8 931 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 POMT1Q9Y6A1 747 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 PIKFYVEQ9Y2I7 2098 aa2.89□□□□□ -1.95
HERC1-203ENST00000558532 COL4A6Q14031 1691 aa2.88□□□□□ -1.95
HERC1-203ENST00000558532 NUP214P35658 2090 aaPredicted RBP2.88□□□□□ -1.95
HERC1-203ENST00000558532 TRBV6-7A0A0A0MS04 114 aa2.88□□□□□ -1.95
HERC1-203ENST00000558532 MBLAC1A4D2B0 266 aaPredicted RBP2.88□□□□□ -1.95
HERC1-203ENST00000558532 GLTPD2A6NH11 291 aa2.88□□□□□ -1.95
HERC1-203ENST00000558532 ACOD1A6NK06 481 aa2.88□□□□□ -1.95
HERC1-203ENST00000558532 C1orf196B1AJZ1 125 aa2.88□□□□□ -1.95
HERC1-203ENST00000558532 ANKRD66B4E2M5 251 aa2.88□□□□□ -1.95
HERC1-203ENST00000558532 H3BN98 237 aa2.88□□□□□ -1.95
HERC1-203ENST00000558532 MKRN2OSH3BPM6 223 aa2.88□□□□□ -1.95
HERC1-203ENST00000558532 ARPC1BO15143 372 aaKnown RBP2.88□□□□□ -1.95
HERC1-203ENST00000558532 SURF4O15260 269 aa2.88□□□□□ -1.95
HERC1-203ENST00000558532 MID1O15344 667 aa2.88□□□□□ -1.95
HERC1-203ENST00000558532 SLC31A2O15432 143 aa2.88□□□□□ -1.95
HERC1-203ENST00000558532 EMC8O43402 210 aa2.88□□□□□ -1.95
HERC1-203ENST00000558532 OR10H3O60404 316 aa2.88□□□□□ -1.95
HERC1-203ENST00000558532 TSPAN3O60637 253 aa2.88□□□□□ -1.95
HERC1-203ENST00000558532 ICOSLGO75144 302 aa2.88□□□□□ -1.95
HERC1-203ENST00000558532 NME6O75414 186 aaPredicted RBP2.88□□□□□ -1.95
HERC1-203ENST00000558532 CLDN11O75508 207 aa2.88□□□□□ -1.95
HERC1-203ENST00000558532 KHDRBS3O75525 346 aaKnown RBP2.88□□□□□ -1.95
HERC1-203ENST00000558532 GJB3O75712 270 aa2.88□□□□□ -1.95
HERC1-203ENST00000558532 SLC25A12O75746 678 aa2.88□□□□□ -1.95
HERC1-203ENST00000558532 GATBO75879 557 aaKnown RBP2.88□□□□□ -1.95
HERC1-203ENST00000558532 AKR7A3O95154 331 aa2.88□□□□□ -1.95
HERC1-203ENST00000558532 LRATO95237 230 aa2.88□□□□□ -1.95
HERC1-203ENST00000558532 CPSF4O95639 269 aaKnown RBP2.88□□□□□ -1.95
HERC1-203ENST00000558532 PTBP3O95758 552 aaKnown RBP2.88□□□□□ -1.95
HERC1-203ENST00000558532 ACTL6AO96019 429 aa2.88□□□□□ -1.95
HERC1-203ENST00000558532 MT-ND4LP03901 98 aa2.88□□□□□ -1.95
HERC1-203ENST00000558532 MT-ND4P03905 459 aa2.88□□□□□ -1.95
HERC1-203ENST00000558532 C8GP07360 202 aa2.88□□□□□ -1.95
HERC1-203ENST00000558532 IL3P08700 152 aa2.88□□□□□ -1.95
HERC1-203ENST00000558532 RAB40ALP0C0E4 278 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms