RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 LCN6P62502 163 aa13.25□□□□□ -0.29
TPM1-211ENST00000558314 TEKQ02763 1124 aa13.25□□□□□ -0.29
TPM1-211ENST00000558314 ST3GAL3Q11203 375 aa13.25□□□□□ -0.29
TPM1-211ENST00000558314 HFEQ30201 348 aa13.25□□□□□ -0.29
TPM1-211ENST00000558314 NRN1LQ496H8 165 aa13.25□□□□□ -0.29
TPM1-211ENST00000558314 C10orf128Q5T292 105 aa13.25□□□□□ -0.29
TPM1-211ENST00000558314 VTCN1Q7Z7D3 282 aa13.25□□□□□ -0.29
TPM1-211ENST00000558314 ZNF101Q8IZC7 436 aa13.25□□□□□ -0.29
TPM1-211ENST00000558314 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.25□□□□□ -0.29
TPM1-211ENST00000558314 SLC25A40Q8TBP6 338 aa13.25□□□□□ -0.29
TPM1-211ENST00000558314 IPCEF1Q8WWN9 437 aaPredicted RBP13.25□□□□□ -0.29
TPM1-211ENST00000558314 CCL17Q92583 94 aa13.25□□□□□ -0.29
TPM1-211ENST00000558314 PRRC1Q96M27 445 aa13.25□□□□□ -0.29
TPM1-211ENST00000558314 FNDC11Q9BVV2 318 aa13.25□□□□□ -0.29
TPM1-211ENST00000558314 ZNF665Q9H7R5 613 aa13.25□□□□□ -0.29
TPM1-211ENST00000558314 CAPN7Q9Y6W3 813 aa13.25□□□□□ -0.29
TPM1-211ENST00000558314 LOC100509620A0A075B734 347 aa13.24□□□□□ -0.29
TPM1-211ENST00000558314 ELOVL7A1L3X0 281 aa13.24□□□□□ -0.29
TPM1-211ENST00000558314 EFCAB9A8MZ26 197 aa13.24□□□□□ -0.29
TPM1-211ENST00000558314 CENPBD1B2RD01 187 aa13.24□□□□□ -0.29
TPM1-211ENST00000558314 CLDN25C9JDP6 229 aa13.24□□□□□ -0.29
TPM1-211ENST00000558314 VENTXO95231 258 aa13.24□□□□□ -0.29
TPM1-211ENST00000558314 MPZL1O95297 269 aa13.24□□□□□ -0.29
TPM1-211ENST00000558314 NR2C1P13056 603 aa13.24□□□□□ -0.29
TPM1-211ENST00000558314 FUT4P22083 530 aa13.24□□□□□ -0.29
TPM1-211ENST00000558314 RPL4P36578 427 aaKnown RBP13.24□□□□□ -0.29
TPM1-211ENST00000558314 WNT5AP41221 380 aa13.24□□□□□ -0.29
TPM1-211ENST00000558314 RPL27P61353 136 aaKnown RBP13.24□□□□□ -0.29
TPM1-211ENST00000558314 LMO4P61968 165 aa13.24□□□□□ -0.29
TPM1-211ENST00000558314 MRPS11P82912 194 aaKnown RBP13.24□□□□□ -0.29
TPM1-211ENST00000558314 PSG4Q00888 419 aa13.24□□□□□ -0.29
TPM1-211ENST00000558314 TAF11Q15544 211 aa13.24□□□□□ -0.29
TPM1-211ENST00000558314 COQ5Q5HYK3 327 aa13.24□□□□□ -0.29
TPM1-211ENST00000558314 ACSM5Q6NUN0 579 aa13.24□□□□□ -0.29
TPM1-211ENST00000558314 ZNF774Q6NX45 483 aa13.24□□□□□ -0.29
TPM1-211ENST00000558314 C12orf54Q6X4T0 127 aa13.24□□□□□ -0.29
TPM1-211ENST00000558314 NRMQ8IXM6 262 aa13.24□□□□□ -0.29
TPM1-211ENST00000558314 OR13C2Q8NGS9 318 aa13.24□□□□□ -0.29
TPM1-211ENST00000558314 LZICQ8WZA0 190 aa13.24□□□□□ -0.29
TPM1-211ENST00000558314 NABP1Q96AH0 204 aa13.24□□□□□ -0.29
TPM1-211ENST00000558314 TIMD4Q96H15 378 aa13.24□□□□□ -0.29
TPM1-211ENST00000558314 OR2H1Q9GZK4 316 aa13.24□□□□□ -0.29
TPM1-211ENST00000558314 OR2J1Q9GZK6 312 aa13.24□□□□□ -0.29
TPM1-211ENST00000558314 RACGAP1Q9H0H5 632 aa13.24□□□□□ -0.29
TPM1-211ENST00000558314 RERGLQ9H628 205 aa13.24□□□□□ -0.29
TPM1-211ENST00000558314 UBAP1Q9NZ09 502 aa13.24□□□□□ -0.29
TPM1-211ENST00000558314 SNX13Q9Y5W8 968 aa13.24□□□□□ -0.29
TPM1-211ENST00000558314 LOC105371242A0A075B767 164 aa13.23□□□□□ -0.29
TPM1-211ENST00000558314 GMNCA6NCL1 334 aa13.23□□□□□ -0.29
TPM1-211ENST00000558314 MGRN1O60291 552 aa13.23□□□□□ -0.29
TPM1-211ENST00000558314 NPPAP01160 153 aa13.23□□□□□ -0.29
TPM1-211ENST00000558314 IGHV1-46P01743 117 aa13.23□□□□□ -0.29
TPM1-211ENST00000558314 IFNW1P05000 195 aa13.23□□□□□ -0.29
TPM1-211ENST00000558314 THRBP10828 461 aa13.23□□□□□ -0.29
TPM1-211ENST00000558314 ANPEPP15144 967 aa13.23□□□□□ -0.29
TPM1-211ENST00000558314 H2AFXP16104 143 aaPredicted RBP13.23□□□□□ -0.29
TPM1-211ENST00000558314 CRYBB2P43320 205 aa13.23□□□□□ -0.29
TPM1-211ENST00000558314 ACTG1P63261 375 aa13.23□□□□□ -0.29
TPM1-211ENST00000558314 SELENOWP63302 87 aa13.23□□□□□ -0.29
TPM1-211ENST00000558314 HNRNPA0Q13151 305 aaKnown RBP13.23□□□□□ -0.29
TPM1-211ENST00000558314 CGB2Q6NT52 195 aa13.23□□□□□ -0.29
TPM1-211ENST00000558314 SLC25A47Q6Q0C1 308 aa13.23□□□□□ -0.29
TPM1-211ENST00000558314 UNQ6126/PRO20091Q6UXV3 157 aa13.23□□□□□ -0.29
TPM1-211ENST00000558314 ZNF730Q6ZMV8 503 aa13.23□□□□□ -0.29
TPM1-211ENST00000558314 RFPL4BQ6ZWI9 263 aa13.23□□□□□ -0.29
TPM1-211ENST00000558314 FKBP9P1Q75LS8 142 aa13.23□□□□□ -0.29
TPM1-211ENST00000558314 OAFQ86UD1 273 aa13.23□□□□□ -0.29
TPM1-211ENST00000558314 ALDH16A1Q8IZ83 802 aa13.23□□□□□ -0.29
TPM1-211ENST00000558314 RAB1CQ92928 201 aa13.23□□□□□ -0.29
TPM1-211ENST00000558314 RAB39BQ96DA2 213 aa13.23□□□□□ -0.29
TPM1-211ENST00000558314 POM121L2Q96KW2 1035 aa13.23□□□□□ -0.29
TPM1-211ENST00000558314 SEPHS2Q99611 448 aa13.23□□□□□ -0.29
TPM1-211ENST00000558314 GAL3ST1Q99999 423 aa13.23□□□□□ -0.29
TPM1-211ENST00000558314 ALG12Q9BV10 488 aa13.23□□□□□ -0.29
TPM1-211ENST00000558314 WNT5BQ9H1J7 359 aa13.23□□□□□ -0.29
TPM1-211ENST00000558314 SMURF2Q9HAU4 748 aa13.23□□□□□ -0.29
TPM1-211ENST00000558314 EMC7Q9NPA0 242 aa13.23□□□□□ -0.29
TPM1-211ENST00000558314 MRGBPQ9NV56 204 aa13.23□□□□□ -0.29
TPM1-211ENST00000558314 A4GNTQ9UNA3 340 aa13.23□□□□□ -0.29
TPM1-211ENST00000558314 HIF3AQ9Y2N7 669 aa13.23□□□□□ -0.29
TPM1-211ENST00000558314 WIPI2Q9Y4P8 454 aa13.23□□□□□ -0.29
TPM1-211ENST00000558314 TRAV20A0A0B4J274 112 aa13.22□□□□□ -0.29
TPM1-211ENST00000558314 PLPP2O43688 288 aa13.22□□□□□ -0.29
TPM1-211ENST00000558314 TIMM8AO60220 97 aaPredicted RBP13.22□□□□□ -0.29
TPM1-211ENST00000558314 PNPP00491 289 aa13.22□□□□□ -0.29
TPM1-211ENST00000558314 NGFP01138 241 aa13.22□□□□□ -0.29
TPM1-211ENST00000558314 IGHV3-13P01766 116 aa13.22□□□□□ -0.29
TPM1-211ENST00000558314 GPR4P46093 362 aa13.22□□□□□ -0.29
TPM1-211ENST00000558314 ZNF133P52736 654 aaPredicted RBP13.22□□□□□ -0.29
TPM1-211ENST00000558314 PPP1CBP62140 327 aa13.22□□□□□ -0.29
TPM1-211ENST00000558314 TRAM2Q15035 370 aa13.22□□□□□ -0.29
TPM1-211ENST00000558314 OTPQ5XKR4 325 aa13.22□□□□□ -0.29
TPM1-211ENST00000558314 TBPL2Q6SJ96 375 aa13.22□□□□□ -0.29
TPM1-211ENST00000558314 RRM2BQ7LG56 351 aa13.22□□□□□ -0.29
TPM1-211ENST00000558314 KLF14Q8TD94 323 aaPredicted RBP13.22□□□□□ -0.29
TPM1-211ENST00000558314 ZNF418Q8TF45 676 aaPredicted RBP13.22□□□□□ -0.29
TPM1-211ENST00000558314 LIPHQ8WWY8 451 aa13.22□□□□□ -0.29
TPM1-211ENST00000558314 GEMIN6Q8WXD5 167 aaKnown RBP13.22□□□□□ -0.29
TPM1-211ENST00000558314 NMD3Q96D46 503 aaKnown RBP13.22□□□□□ -0.29
TPM1-211ENST00000558314 ELMOD3Q96FG2 381 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms