RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 BOKQ9UMX3 212 aaPredicted RBP4.64□□□□□ -1.67
RTF1-204ENST00000558117 MGAT4BQ9UQ53 548 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 ASF1AQ9Y294 204 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 TRBV5-5A0A0J9YX44 114 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 A0A0U1RRA0 63 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 GOLGA6L10A6NI86 522 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 C15orf61A6NNL5 157 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 EEF2KO00418 725 aaKnown RBP4.63□□□□□ -1.67
RTF1-204ENST00000558117 P2RX6O15547 441 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 TBX19O60806 448 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 OR6A2O95222 327 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 NSA2O95478 260 aaKnown RBP4.63□□□□□ -1.67
RTF1-204ENST00000558117 AP2A1O95782 977 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 C1QAP02745 245 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 HPNP05981 417 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 ZSCAN5DPP0CG00 497 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 CLUP10909 449 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 CD9P21926 228 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 GDF1P27539 372 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 CDK9P50750 372 aaKnown RBP4.63□□□□□ -1.67
RTF1-204ENST00000558117 FKBP3Q00688 224 aaKnown RBP4.63□□□□□ -1.67
RTF1-204ENST00000558117 TNFRSF17Q02223 184 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 LRRC63Q05C16 580 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 BSPH1Q075Z2 132 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 LCP2Q13094 533 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 ZMYND11Q15326 602 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 PPP1R7Q15435 360 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 ZNF74Q16587 644 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 TMEM41BQ5BJD5 291 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 DEFB121Q5J5C9 76 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 SCYL2Q6P3W7 929 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 UGT2A3Q6UWM9 527 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 ANGPTL8Q6UXH0 198 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 FAM151BQ6UXP7 276 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 SIGLEC15Q6ZMC9 328 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 ADAMTSL5Q6ZMM2 481 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 GRAMD2AQ8IUY3 354 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 VSTM4Q8IW00 320 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 TEX29Q8N6K0 151 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 B3GNT7Q8NFL0 401 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 OR7A2PQ8NGA2 310 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 AGR3Q8TD06 166 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 ANKRD49Q8WVL7 239 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 C22orf15Q8WYQ4 148 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 TADA1Q96BN2 335 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 TRIB3Q96RU7 358 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 ATOH8Q96SQ7 321 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 COQ7Q99807 217 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 VGLL1Q99990 258 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 FICDQ9BVA6 458 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 NMNAT2Q9BZQ4 307 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 ACTR6Q9GZN1 396 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 ROPN1Q9HAT0 212 aaPredicted RBP4.63□□□□□ -1.67
RTF1-204ENST00000558117 BEX1Q9HBH7 125 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 UBE2TQ9NPD8 197 aaPredicted RBP4.63□□□□□ -1.67
RTF1-204ENST00000558117 GSN-AS1Q9NRJ2 163 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 TXNDC16Q9P2K2 825 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 IL20RAQ9UHF4 553 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 PYCARDQ9ULZ3 195 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 SH3GLB1Q9Y371 365 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 SPACA6W5XKT8 324 aa4.63□□□□□ -1.67
RTF1-204ENST00000558117 DMBT1Q9UGM3 2413 aaPredicted RBP4.63□□□□□ -1.67
RTF1-204ENST00000558117 MAGEB16A2A368 324 aa4.62□□□□□ -1.67
RTF1-204ENST00000558117 PRSS46E5RG02 174 aa4.62□□□□□ -1.67
RTF1-204ENST00000558117 E7EQL1 145 aa4.62□□□□□ -1.67
RTF1-204ENST00000558117 H0YIV9 168 aa4.62□□□□□ -1.67
RTF1-204ENST00000558117 CLDN34H7C241 214 aa4.62□□□□□ -1.67
RTF1-204ENST00000558117 GFYI3L273 518 aa4.62□□□□□ -1.67
RTF1-204ENST00000558117 WWP2O00308 870 aa4.62□□□□□ -1.67
RTF1-204ENST00000558117 EMC8O43402 210 aa4.62□□□□□ -1.67
RTF1-204ENST00000558117 SNX3O60493 162 aa4.62□□□□□ -1.67
RTF1-204ENST00000558117 TRAPPC6AO75865 159 aa4.62□□□□□ -1.67
RTF1-204ENST00000558117 FGFR1OPO95684 399 aaKnown RBP4.62□□□□□ -1.67
RTF1-204ENST00000558117 PSMB5P28074 263 aa4.62□□□□□ -1.67
RTF1-204ENST00000558117 PPP1R2P41236 205 aa4.62□□□□□ -1.67
RTF1-204ENST00000558117 AIF1P55008 147 aa4.62□□□□□ -1.67
RTF1-204ENST00000558117 CDH6P55285 790 aa4.62□□□□□ -1.67
RTF1-204ENST00000558117 HSF2Q03933 536 aa4.62□□□□□ -1.67
RTF1-204ENST00000558117 TRAP1Q12931 704 aaKnown RBP4.62□□□□□ -1.67
RTF1-204ENST00000558117 GRB7Q14451 532 aa4.62□□□□□ -1.67
RTF1-204ENST00000558117 CARTPTQ16568 116 aa4.62□□□□□ -1.67
RTF1-204ENST00000558117 EXOC3L2Q2M3D2 409 aa4.62□□□□□ -1.67
RTF1-204ENST00000558117 EIPR1Q53HC9 387 aa4.62□□□□□ -1.67
RTF1-204ENST00000558117 NCR3LG1Q68D85 454 aa4.62□□□□□ -1.67
RTF1-204ENST00000558117 ZNF770Q6IQ21 691 aaPredicted RBP4.62□□□□□ -1.67
RTF1-204ENST00000558117 ZNF613Q6PF04 617 aa4.62□□□□□ -1.67
RTF1-204ENST00000558117 METAP1DQ6UB28 335 aaPredicted RBP4.62□□□□□ -1.67
RTF1-204ENST00000558117 SBSNQ6UWP8 590 aa4.62□□□□□ -1.67
RTF1-204ENST00000558117 NT5DC3Q86UY8 548 aa4.62□□□□□ -1.67
RTF1-204ENST00000558117 STHQ8IWL8 128 aa4.62□□□□□ -1.67
RTF1-204ENST00000558117 MUC15Q8N387 334 aa4.62□□□□□ -1.67
RTF1-204ENST00000558117 TMEM35BQ8NCS4 154 aa4.62□□□□□ -1.67
RTF1-204ENST00000558117 OR4A16Q8NH70 328 aa4.62□□□□□ -1.67
RTF1-204ENST00000558117 OR2A5Q96R48 311 aa4.62□□□□□ -1.67
RTF1-204ENST00000558117 NKX3-1Q99801 234 aaPredicted RBP4.62□□□□□ -1.67
RTF1-204ENST00000558117 CABLES2Q9BTV7 478 aa4.62□□□□□ -1.67
RTF1-204ENST00000558117 VCX2Q9H322 139 aa4.62□□□□□ -1.67
RTF1-204ENST00000558117 TMEM231Q9H6L2 316 aa4.62□□□□□ -1.67
RTF1-204ENST00000558117 DNAJC12Q9UKB3 198 aa4.62□□□□□ -1.67
RTF1-204ENST00000558117 IGKV3D-11A0A0A0MRZ8 115 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms