RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 SCGB2A2Q13296 93 aa12.49□□□□□ -0.41
SHMT2-235ENST00000557740 SPATA46Q5T0L3 261 aa12.49□□□□□ -0.41
SHMT2-235ENST00000557740 THEM4Q5T1C6 240 aa12.49□□□□□ -0.41
SHMT2-235ENST00000557740 USP51Q70EK9 711 aa12.49□□□□□ -0.41
SHMT2-235ENST00000557740 IGFN1Q86VF2 1251 aa12.49□□□□□ -0.41
SHMT2-235ENST00000557740 NRMQ8IXM6 262 aa12.49□□□□□ -0.41
SHMT2-235ENST00000557740 OFCC1Q8IZS5 231 aa12.49□□□□□ -0.41
SHMT2-235ENST00000557740 POU5F2Q8N7G0 328 aa12.49□□□□□ -0.41
SHMT2-235ENST00000557740 AKR7LQ8NHP1 331 aa12.49□□□□□ -0.41
SHMT2-235ENST00000557740 TIMD4Q96H15 378 aa12.49□□□□□ -0.41
SHMT2-235ENST00000557740 METTL17Q9H7H0 456 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-235ENST00000557740 SAP30LQ9HAJ7 183 aa12.49□□□□□ -0.41
SHMT2-235ENST00000557740 METRNQ9UJH8 293 aa12.49□□□□□ -0.41
SHMT2-235ENST00000557740 A4GNTQ9UNA3 340 aa12.49□□□□□ -0.41
SHMT2-235ENST00000557740 TRAV27A0A087WT01 109 aa12.48□□□□□ -0.41
SHMT2-235ENST00000557740 A0A1W2PPL8 197 aa12.48□□□□□ -0.41
SHMT2-235ENST00000557740 PLSCR5A0PG75 271 aa12.48□□□□□ -0.41
SHMT2-235ENST00000557740 A6NIZ1 184 aa12.48□□□□□ -0.41
SHMT2-235ENST00000557740 EFCAB9A8MZ26 197 aa12.48□□□□□ -0.41
SHMT2-235ENST00000557740 CLDN25C9JDP6 229 aa12.48□□□□□ -0.41
SHMT2-235ENST00000557740 ZNF682O95780 498 aa12.48□□□□□ -0.41
SHMT2-235ENST00000557740 IGHV3-13P01766 116 aa12.48□□□□□ -0.41
SHMT2-235ENST00000557740 ITGA2P17301 1181 aa12.48□□□□□ -0.41
SHMT2-235ENST00000557740 YAP1P46937 504 aaKnown RBP12.48□□□□□ -0.41
SHMT2-235ENST00000557740 ZNF81P51508 661 aa12.48□□□□□ -0.41
SHMT2-235ENST00000557740 CTXN1P60606 82 aa12.48□□□□□ -0.41
SHMT2-235ENST00000557740 RAP1BP61224 184 aa12.48□□□□□ -0.41
SHMT2-235ENST00000557740 PCBD1P61457 104 aa12.48□□□□□ -0.41
SHMT2-235ENST00000557740 RAP1AP62834 184 aa12.48□□□□□ -0.41
SHMT2-235ENST00000557740 MVKQ03426 396 aa12.48□□□□□ -0.41
SHMT2-235ENST00000557740 TRAM2Q15035 370 aa12.48□□□□□ -0.41
SHMT2-235ENST00000557740 TSTQ16762 297 aaKnown RBP12.48□□□□□ -0.41
SHMT2-235ENST00000557740 ZNF718Q3SXZ3 478 aa12.48□□□□□ -0.41
SHMT2-235ENST00000557740 AVPI1Q5T686 147 aa12.48□□□□□ -0.41
SHMT2-235ENST00000557740 FAM27BQ5VT28 67 aa12.48□□□□□ -0.41
SHMT2-235ENST00000557740 SLC25A47Q6Q0C1 308 aa12.48□□□□□ -0.41
SHMT2-235ENST00000557740 VTCN1Q7Z7D3 282 aa12.48□□□□□ -0.41
SHMT2-235ENST00000557740 OAFQ86UD1 273 aa12.48□□□□□ -0.41
SHMT2-235ENST00000557740 ALDH16A1Q8IZ83 802 aa12.48□□□□□ -0.41
SHMT2-235ENST00000557740 ZNF101Q8IZC7 436 aa12.48□□□□□ -0.41
SHMT2-235ENST00000557740 OR51A7Q8NH64 312 aa12.48□□□□□ -0.41
SHMT2-235ENST00000557740 IPCEF1Q8WWN9 437 aaPredicted RBP12.48□□□□□ -0.41
SHMT2-235ENST00000557740 GEMIN6Q8WXD5 167 aaKnown RBP12.48□□□□□ -0.41
SHMT2-235ENST00000557740 GTF3AQ92664 365 aaKnown RBP12.48□□□□□ -0.41
SHMT2-235ENST00000557740 POM121L2Q96KW2 1035 aa12.48□□□□□ -0.41
SHMT2-235ENST00000557740 LRRC37BQ96QE4 947 aa12.48□□□□□ -0.41
SHMT2-235ENST00000557740 OR2H1Q9GZK4 316 aa12.48□□□□□ -0.41
SHMT2-235ENST00000557740 OCEL1Q9H607 264 aa12.48□□□□□ -0.41
SHMT2-235ENST00000557740 ZNF665Q9H7R5 613 aa12.48□□□□□ -0.41
SHMT2-235ENST00000557740 ARMCX1Q9P291 453 aa12.48□□□□□ -0.41
SHMT2-235ENST00000557740 RHCGQ9UBD6 479 aa12.48□□□□□ -0.41
SHMT2-235ENST00000557740 SVEP1Q4LDE5 3571 aa12.47□□□□□ -0.41
SHMT2-235ENST00000557740 LOC100509620A0A075B734 347 aa12.47□□□□□ -0.41
SHMT2-235ENST00000557740 TRAV20A0A0B4J274 112 aa12.47□□□□□ -0.41
SHMT2-235ENST00000557740 GSTA4O15217 222 aa12.47□□□□□ -0.41
SHMT2-235ENST00000557740 CST2P09228 141 aa12.47□□□□□ -0.41
SHMT2-235ENST00000557740 ANPEPP15144 967 aa12.47□□□□□ -0.41
SHMT2-235ENST00000557740 MAKP20794 623 aa12.47□□□□□ -0.41
SHMT2-235ENST00000557740 MSR1P21757 451 aa12.47□□□□□ -0.41
SHMT2-235ENST00000557740 LAP3P28838 519 aa12.47□□□□□ -0.41
SHMT2-235ENST00000557740 MPV17P39210 176 aa12.47□□□□□ -0.41
SHMT2-235ENST00000557740 WNT5AP41221 380 aa12.47□□□□□ -0.41
SHMT2-235ENST00000557740 CRYBB2P43320 205 aa12.47□□□□□ -0.41
SHMT2-235ENST00000557740 LMO4P61968 165 aa12.47□□□□□ -0.41
SHMT2-235ENST00000557740 PSG4Q00888 419 aa12.47□□□□□ -0.41
SHMT2-235ENST00000557740 HFEQ30201 348 aa12.47□□□□□ -0.41
SHMT2-235ENST00000557740 ANKDD1AQ495B1 522 aa12.47□□□□□ -0.41
SHMT2-235ENST00000557740 IFI44LQ53G44 452 aa12.47□□□□□ -0.41
SHMT2-235ENST00000557740 FAM209AQ5JX71 171 aa12.47□□□□□ -0.41
SHMT2-235ENST00000557740 ZNF730Q6ZMV8 503 aa12.47□□□□□ -0.41
SHMT2-235ENST00000557740 MEX3DQ86XN8 651 aaKnown RBP12.47□□□□□ -0.41
SHMT2-235ENST00000557740 C1orf174Q8IYL3 243 aa12.47□□□□□ -0.41
SHMT2-235ENST00000557740 CLDN22Q8N7P3 220 aa12.47□□□□□ -0.41
SHMT2-235ENST00000557740 ABHD4Q8TB40 342 aa12.47□□□□□ -0.41
SHMT2-235ENST00000557740 RAB39BQ96DA2 213 aa12.47□□□□□ -0.41
SHMT2-235ENST00000557740 ELMOD3Q96FG2 381 aa12.47□□□□□ -0.41
SHMT2-235ENST00000557740 NDEL1Q9GZM8 345 aa12.47□□□□□ -0.41
SHMT2-235ENST00000557740 WNT5BQ9H1J7 359 aa12.47□□□□□ -0.41
SHMT2-235ENST00000557740 MAN2C1Q9NTJ4 1040 aa12.47□□□□□ -0.41
SHMT2-235ENST00000557740 CMTM6Q9NX76 183 aa12.47□□□□□ -0.41
SHMT2-235ENST00000557740 TIMM10BQ9Y5J6 103 aa12.47□□□□□ -0.41
SHMT2-235ENST00000557740 J3KTA2 159 aa12.46□□□□□ -0.41
SHMT2-235ENST00000557740 CXCR6O00574 342 aa12.46□□□□□ -0.41
SHMT2-235ENST00000557740 SPRY3O43610 288 aa12.46□□□□□ -0.41
SHMT2-235ENST00000557740 RPL4P36578 427 aaKnown RBP12.46□□□□□ -0.41
SHMT2-235ENST00000557740 SLC9A3P48764 834 aa12.46□□□□□ -0.41
SHMT2-235ENST00000557740 PPP1CBP62140 327 aa12.46□□□□□ -0.41
SHMT2-235ENST00000557740 GUCY1A3Q02108 690 aa12.46□□□□□ -0.41
SHMT2-235ENST00000557740 LIPEQ05469 1076 aa12.46□□□□□ -0.41
SHMT2-235ENST00000557740 PRKCDQ05655 676 aa12.46□□□□□ -0.41
SHMT2-235ENST00000557740 ZMAT1Q5H9K5 638 aa12.46□□□□□ -0.41
SHMT2-235ENST00000557740 MBNL2Q5VZF2 373 aaKnown RBP12.46□□□□□ -0.41
SHMT2-235ENST00000557740 ACSM5Q6NUN0 579 aa12.46□□□□□ -0.41
SHMT2-235ENST00000557740 FAHD2BQ6P2I3 314 aaPredicted RBP12.46□□□□□ -0.41
SHMT2-235ENST00000557740 ARL9Q6T311 187 aa12.46□□□□□ -0.41
SHMT2-235ENST00000557740 RFPL4BQ6ZWI9 263 aa12.46□□□□□ -0.41
SHMT2-235ENST00000557740 FKBP9P1Q75LS8 142 aa12.46□□□□□ -0.41
SHMT2-235ENST00000557740 TEX29Q8N6K0 151 aa12.46□□□□□ -0.41
SHMT2-235ENST00000557740 OR13C2Q8NGS9 318 aa12.46□□□□□ -0.41
SHMT2-235ENST00000557740 RP9Q8TA86 221 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms