RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 IQCMA0A1B0GVH7 501 aa13.73□□□□□ -0.21
TUBB3-214ENST00000557490 SOCS2O14508 198 aa13.73□□□□□ -0.21
TUBB3-214ENST00000557490 IMPA2O14732 288 aa13.73□□□□□ -0.21
TUBB3-214ENST00000557490 PPP1R3DO95685 299 aa13.73□□□□□ -0.21
TUBB3-214ENST00000557490 TXNDC12O95881 172 aa13.73□□□□□ -0.21
TUBB3-214ENST00000557490 OR4A8P0C604 315 aa13.73□□□□□ -0.21
TUBB3-214ENST00000557490 HSF2Q03933 536 aa13.73□□□□□ -0.21
TUBB3-214ENST00000557490 SNTB2Q13425 540 aaKnown RBP13.73□□□□□ -0.21
TUBB3-214ENST00000557490 GK3PQ14409 553 aa13.73□□□□□ -0.21
TUBB3-214ENST00000557490 ETFDHQ16134 617 aa13.73□□□□□ -0.21
TUBB3-214ENST00000557490 FAM27BQ5VT28 67 aa13.73□□□□□ -0.21
TUBB3-214ENST00000557490 KRT80Q6KB66 452 aa13.73□□□□□ -0.21
TUBB3-214ENST00000557490 FOXL2NBQ6ZUU3 175 aa13.73□□□□□ -0.21
TUBB3-214ENST00000557490 SLC30A7Q8NEW0 376 aa13.73□□□□□ -0.21
TUBB3-214ENST00000557490 OR9Q2Q8NGE9 314 aa13.73□□□□□ -0.21
TUBB3-214ENST00000557490 CANT1Q8WVQ1 401 aa13.73□□□□□ -0.21
TUBB3-214ENST00000557490 NABP1Q96AH0 204 aa13.73□□□□□ -0.21
TUBB3-214ENST00000557490 SAMD8Q96LT4 415 aa13.73□□□□□ -0.21
TUBB3-214ENST00000557490 ERMAPQ96PL5 475 aaPredicted RBP13.73□□□□□ -0.21
TUBB3-214ENST00000557490 IFT27Q9BW83 186 aa13.73□□□□□ -0.21
TUBB3-214ENST00000557490 CADM1Q9BY67 442 aaKnown RBP13.73□□□□□ -0.21
TUBB3-214ENST00000557490 LRMDAQ9H2I8 198 aa13.73□□□□□ -0.21
TUBB3-214ENST00000557490 ZNF442Q9H7R0 627 aa13.73□□□□□ -0.21
TUBB3-214ENST00000557490 YY1AP1Q9H869 796 aa13.73□□□□□ -0.21
TUBB3-214ENST00000557490 POMPQ9Y244 141 aa13.73□□□□□ -0.21
TUBB3-214ENST00000557490 U3KQV3 271 aa13.73□□□□□ -0.21
TUBB3-214ENST00000557490 B9A039 149 aa13.72□□□□□ -0.21
TUBB3-214ENST00000557490 GNGT2O14610 69 aa13.72□□□□□ -0.21
TUBB3-214ENST00000557490 KHDRBS3O75525 346 aaKnown RBP13.72□□□□□ -0.21
TUBB3-214ENST00000557490 CST1P01037 141 aa13.72□□□□□ -0.21
TUBB3-214ENST00000557490 CST2P09228 141 aa13.72□□□□□ -0.21
TUBB3-214ENST00000557490 MMP7P09237 267 aaPredicted RBP13.72□□□□□ -0.21
TUBB3-214ENST00000557490 ZNF35P13682 527 aa13.72□□□□□ -0.21
TUBB3-214ENST00000557490 MSR1P21757 451 aa13.72□□□□□ -0.21
TUBB3-214ENST00000557490 NR4A1P22736 598 aa13.72□□□□□ -0.21
TUBB3-214ENST00000557490 LAP3P28838 519 aa13.72□□□□□ -0.21
TUBB3-214ENST00000557490 PCSK6P29122 969 aa13.72□□□□□ -0.21
TUBB3-214ENST00000557490 THBS4P35443 961 aa13.72□□□□□ -0.21
TUBB3-214ENST00000557490 PCBD1P61457 104 aa13.72□□□□□ -0.21
TUBB3-214ENST00000557490 SNRPD2P62316 118 aaKnown RBP13.72□□□□□ -0.21
TUBB3-214ENST00000557490 PPP1R8Q12972 351 aaKnown RBP13.72□□□□□ -0.21
TUBB3-214ENST00000557490 ADIPOQQ15848 244 aa13.72□□□□□ -0.21
TUBB3-214ENST00000557490 MICAQ29983 383 aa13.72□□□□□ -0.21
TUBB3-214ENST00000557490 TBC1D28Q2M2D7 210 aa13.72□□□□□ -0.21
TUBB3-214ENST00000557490 RPL13AP3Q6NVV1 102 aa13.72□□□□□ -0.21
TUBB3-214ENST00000557490 ZNF620Q6ZNG0 422 aa13.72□□□□□ -0.21
TUBB3-214ENST00000557490 JAZF1Q86VZ6 243 aa13.72□□□□□ -0.21
TUBB3-214ENST00000557490 ZNF584Q8IVC4 421 aa13.72□□□□□ -0.21
TUBB3-214ENST00000557490 AQP11Q8NBQ7 271 aa13.72□□□□□ -0.21
TUBB3-214ENST00000557490 OR52L1Q8NGH7 329 aa13.72□□□□□ -0.21
TUBB3-214ENST00000557490 OR1J2Q8NGS2 313 aa13.72□□□□□ -0.21
TUBB3-214ENST00000557490 SYT4Q9H2B2 425 aa13.72□□□□□ -0.21
TUBB3-214ENST00000557490 RERGLQ9H628 205 aa13.72□□□□□ -0.21
TUBB3-214ENST00000557490 CDH20Q9HBT6 801 aa13.72□□□□□ -0.21
TUBB3-214ENST00000557490 VNN3Q9NY84 501 aa13.72□□□□□ -0.21
TUBB3-214ENST00000557490 VSX1Q9NZR4 365 aaPredicted RBP13.72□□□□□ -0.21
TUBB3-214ENST00000557490 CDH10Q9Y6N8 788 aa13.72□□□□□ -0.21
TUBB3-214ENST00000557490 HEATR1Q9H583 2144 aaKnown RBP13.72□□□□□ -0.21
TUBB3-214ENST00000557490 C12orf71A8MTZ7 269 aa13.71□□□□□ -0.21
TUBB3-214ENST00000557490 ARPC3O15145 178 aa13.71□□□□□ -0.21
TUBB3-214ENST00000557490 IDH3BO43837 385 aa13.71□□□□□ -0.21
TUBB3-214ENST00000557490 SLC16A7O60669 478 aa13.71□□□□□ -0.21
TUBB3-214ENST00000557490 GASTP01350 101 aa13.71□□□□□ -0.21
TUBB3-214ENST00000557490 IGHV4-39P01824 125 aa13.71□□□□□ -0.21
TUBB3-214ENST00000557490 CTLA4P16410 223 aa13.71□□□□□ -0.21
TUBB3-214ENST00000557490 ZNF32P17041 273 aa13.71□□□□□ -0.21
TUBB3-214ENST00000557490 NOS3P29474 1203 aa13.71□□□□□ -0.21
TUBB3-214ENST00000557490 APLNRP35414 380 aa13.71□□□□□ -0.21
TUBB3-214ENST00000557490 RPS23P62266 143 aaKnown RBP13.71□□□□□ -0.21
TUBB3-214ENST00000557490 RAB35Q15286 201 aa13.71□□□□□ -0.21
TUBB3-214ENST00000557490 EFNB3Q15768 340 aa13.71□□□□□ -0.21
TUBB3-214ENST00000557490 SWI5Q1ZZU3 235 aa13.71□□□□□ -0.21
TUBB3-214ENST00000557490 MST1LQ2TV78 715 aa13.71□□□□□ -0.21
TUBB3-214ENST00000557490 PABPC1L2AQ5JQF8 200 aa13.71□□□□□ -0.21
TUBB3-214ENST00000557490 ZNF770Q6IQ21 691 aaPredicted RBP13.71□□□□□ -0.21
TUBB3-214ENST00000557490 DNM1P34Q6PK57 102 aa13.71□□□□□ -0.21
TUBB3-214ENST00000557490 BDH2Q9BUT1 245 aa13.71□□□□□ -0.21
TUBB3-214ENST00000557490 POLE4Q9NR33 117 aa13.71□□□□□ -0.21
TUBB3-214ENST00000557490 SLC7A8Q9UHI5 535 aa13.71□□□□□ -0.21
TUBB3-214ENST00000557490 GDF2Q9UK05 429 aaPredicted RBP13.71□□□□□ -0.21
TUBB3-214ENST00000557490 FBXO9Q9UK97 447 aaPredicted RBP13.71□□□□□ -0.21
TUBB3-214ENST00000557490 CMAHPQ9Y471 501 aa13.71□□□□□ -0.21
TUBB3-214ENST00000557490 TIMM10BQ9Y5J6 103 aa13.71□□□□□ -0.21
TUBB3-214ENST00000557490 USF3Q68DE3 2245 aa13.71□□□□□ -0.22
TUBB3-214ENST00000557490 TCRBV3S1A0A5B6 114 aa13.7□□□□□ -0.22
TUBB3-214ENST00000557490 H7C417 338 aa13.7□□□□□ -0.22
TUBB3-214ENST00000557490 RENP00797 406 aa13.7□□□□□ -0.22
TUBB3-214ENST00000557490 GSTM3P21266 225 aa13.7□□□□□ -0.22
TUBB3-214ENST00000557490 CRABP1P29762 137 aa13.7□□□□□ -0.22
TUBB3-214ENST00000557490 GLRXP35754 106 aa13.7□□□□□ -0.22
TUBB3-214ENST00000557490 CDKN2AP42771 156 aaKnown RBP13.7□□□□□ -0.22
TUBB3-214ENST00000557490 CLEC12BQ2HXU8 276 aa13.7□□□□□ -0.22
TUBB3-214ENST00000557490 CLEC12AQ5QGZ9 265 aa13.7□□□□□ -0.22
TUBB3-214ENST00000557490 LEG1Q6P5S2 330 aa13.7□□□□□ -0.22
TUBB3-214ENST00000557490 RASSF6Q6ZTQ3 369 aa13.7□□□□□ -0.22
TUBB3-214ENST00000557490 PTCHD4Q6ZW05 846 aa13.7□□□□□ -0.22
TUBB3-214ENST00000557490 GLB1L2Q8IW92 636 aa13.7□□□□□ -0.22
TUBB3-214ENST00000557490 OR10G2Q8NGC3 310 aa13.7□□□□□ -0.22
TUBB3-214ENST00000557490 OR4K13Q8NH42 304 aa13.7□□□□□ -0.22
TUBB3-214ENST00000557490 GIPC3Q8TF64 312 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms