RNA–Protein interactions for RNA: ENST00000557348.5

SHMT2-229, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,659 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-229ENST00000557348 ARL6IP5O75915 188 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 TFP02787 698 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 NR2C1P13056 603 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 ZNF17P17021 662 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 OTX2P32243 289 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 PYCR1P32322 319 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 NAA10P41227 235 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-229ENST00000557348 SIRPAP78324 504 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 DHODHQ02127 395 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 TLE3Q04726 772 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 EGR3Q06889 387 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 CDK5R1Q15078 307 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 OR7A5Q15622 319 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 TMEM65Q6PI78 240 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 IL20RBQ6UXL0 311 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 OVCH2Q7RTZ1 564 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 PXKQ7Z7A4 578 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 GTPBP8Q8N3Z3 284 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-229ENST00000557348 NTNG2Q96CW9 530 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 INTS14Q96SY0 518 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 WDR76Q9H967 626 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 SH2D2AQ9NP31 389 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 NCDNQ9UBB6 729 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 ZMIZ1Q9ULJ6 1067 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 RPH3AQ9Y2J0 694 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-229ENST00000557348 C4orf47A7E2U8 309 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 C17orf51A8MQB3 221 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 C9orf172C9J069 976 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 TOR1AO14656 332 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 P04436 131 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 HOXD4P09016 255 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-229ENST00000557348 CD96P40200 585 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 OR12D2P58182 307 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 GLO1Q04760 184 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 TCF15Q12870 199 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 DYRK1AQ13627 763 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 ZNF239Q16600 458 aaKnown RBP11.36□□□□□ -0.59
SHMT2-229ENST00000557348 HES3Q5TGS1 186 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 C1QL3Q5VWW1 255 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 ZNF57Q68EA5 555 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-229ENST00000557348 HBMQ6B0K9 141 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 ARL9Q6T311 187 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 TIPARPQ7Z3E1 657 aaKnown RBP11.36□□□□□ -0.59
SHMT2-229ENST00000557348 PIP4P1Q86T03 277 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 CDC20BQ86Y33 519 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 TIGD4Q8IY51 512 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 EIF4E3Q8N5X7 224 aaKnown RBP11.36□□□□□ -0.59
SHMT2-229ENST00000557348 ZFP41Q8N8Y5 198 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 ZNF454Q8N9F8 522 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 OR1J4Q8NGS1 313 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 ASB13Q8WXK3 278 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 C5orf34Q96MH7 638 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 MFRPQ9BY79 579 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 SYT4Q9H2B2 425 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 OR51J1Q9H342 316 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 ABI3Q9P2A4 366 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 LAMP5Q9UJQ1 280 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 GNG8Q9UK08 70 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 CACNG2Q9Y698 323 aa11.36□□□□□ -0.59
SHMT2-229ENST00000557348 WDFY4Q6ZS81 3184 aa11.35□□□□□ -0.59
SHMT2-229ENST00000557348 LOC102725191A0A1B0GVB3 256 aa11.35□□□□□ -0.59
SHMT2-229ENST00000557348 LINC00854A0A1B0GVQ3 168 aa11.35□□□□□ -0.59
SHMT2-229ENST00000557348 C2orf72A6NCS6 295 aa11.35□□□□□ -0.59
SHMT2-229ENST00000557348 GJE1A6NN92 205 aa11.35□□□□□ -0.59
SHMT2-229ENST00000557348 SELENOFO60613 162 aa11.35□□□□□ -0.59
SHMT2-229ENST00000557348 CBR3O75828 277 aa11.35□□□□□ -0.59
SHMT2-229ENST00000557348 ZNF432O94892 652 aa11.35□□□□□ -0.59
SHMT2-229ENST00000557348 SULT1A3P0DMM9 295 aa11.35□□□□□ -0.59
SHMT2-229ENST00000557348 SULT1A4P0DMN0 295 aa11.35□□□□□ -0.59
SHMT2-229ENST00000557348 CALCRP30988 508 aa11.35□□□□□ -0.59
SHMT2-229ENST00000557348 S100A12P80511 92 aa11.35□□□□□ -0.59
SHMT2-229ENST00000557348 SPEM2Q0P670 501 aa11.35□□□□□ -0.59
SHMT2-229ENST00000557348 GPR176Q14439 515 aa11.35□□□□□ -0.59
SHMT2-229ENST00000557348 TRIP6Q15654 476 aaKnown RBP11.35□□□□□ -0.59
SHMT2-229ENST00000557348 VASNQ6EMK4 673 aa11.35□□□□□ -0.59
SHMT2-229ENST00000557348 WDSUB1Q8N9V3 476 aa11.35□□□□□ -0.59
SHMT2-229ENST00000557348 OR51L1Q8NGJ5 315 aa11.35□□□□□ -0.59
SHMT2-229ENST00000557348 ZPLD1Q8TCW7 415 aa11.35□□□□□ -0.59
SHMT2-229ENST00000557348 PELI1Q96FA3 418 aa11.35□□□□□ -0.59
SHMT2-229ENST00000557348 TMPRSS13Q9BYE2 586 aa11.35□□□□□ -0.59
SHMT2-229ENST00000557348 LDAHQ9H6V9 325 aa11.35□□□□□ -0.59
SHMT2-229ENST00000557348 SRA1Q9HD15 236 aaKnown RBP11.35□□□□□ -0.59
SHMT2-229ENST00000557348 P4HTMQ9NXG6 502 aa11.35□□□□□ -0.59
SHMT2-229ENST00000557348 COMMD3Q9UBI1 195 aa11.35□□□□□ -0.59
SHMT2-229ENST00000557348 CYB5R1Q9UHQ9 305 aa11.35□□□□□ -0.59
SHMT2-229ENST00000557348 A0A0A6YYJ9 748 aa11.34□□□□□ -0.59
SHMT2-229ENST00000557348 NAP1L6A6NFF2 107 aa11.34□□□□□ -0.59
SHMT2-229ENST00000557348 ZNF879B4DU55 563 aa11.34□□□□□ -0.59
SHMT2-229ENST00000557348 STMND1H3BQB6 276 aa11.34□□□□□ -0.59
SHMT2-229ENST00000557348 CTDSPLO15194 276 aa11.34□□□□□ -0.59
SHMT2-229ENST00000557348 EIF1BO60739 113 aaKnown RBP11.34□□□□□ -0.59
SHMT2-229ENST00000557348 PMS2P2O95744 297 aa11.34□□□□□ -0.59
SHMT2-229ENST00000557348 LIFP15018 202 aa11.34□□□□□ -0.59
SHMT2-229ENST00000557348 NPR2P20594 1047 aa11.34□□□□□ -0.59
SHMT2-229ENST00000557348 DPP4P27487 766 aa11.34□□□□□ -0.59
SHMT2-229ENST00000557348 CASRP41180 1078 aa11.34□□□□□ -0.59
SHMT2-229ENST00000557348 PITPNBP48739 271 aa11.34□□□□□ -0.59
SHMT2-229ENST00000557348 GDI2P50395 445 aaKnown RBP11.34□□□□□ -0.59
SHMT2-229ENST00000557348 SNRPD2P62316 118 aaKnown RBP11.34□□□□□ -0.59
SHMT2-229ENST00000557348 SLC35A1P78382 337 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms