RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 FAM27BQ5VT28 67 aa18.19■□□□□ 0.5
SEC23A-213ENST00000557280 ZBTB46Q86UZ6 589 aa18.19■□□□□ 0.5
SEC23A-213ENST00000557280 ZNF584Q8IVC4 421 aa18.19■□□□□ 0.5
SEC23A-213ENST00000557280 CCDC36Q8IYA8 594 aa18.19■□□□□ 0.5
SEC23A-213ENST00000557280 CBR4Q8N4T8 237 aa18.19■□□□□ 0.5
SEC23A-213ENST00000557280 NANOS1Q8WY41 292 aaKnown RBP18.19■□□□□ 0.5
SEC23A-213ENST00000557280 ZNF416Q9BWM5 594 aa18.19■□□□□ 0.5
SEC23A-213ENST00000557280 NMNAT2Q9BZQ4 307 aa18.19■□□□□ 0.5
SEC23A-213ENST00000557280 RACGAP1Q9H0H5 632 aa18.19■□□□□ 0.5
SEC23A-213ENST00000557280 PLEKHF2Q9H8W4 249 aa18.19■□□□□ 0.5
SEC23A-213ENST00000557280 KLHL21Q9UJP4 597 aa18.19■□□□□ 0.5
SEC23A-213ENST00000557280 ABCA4P78363 2273 aa18.19■□□□□ 0.5
SEC23A-213ENST00000557280 ABCA12Q86UK0 2595 aa18.18■□□□□ 0.5
SEC23A-213ENST00000557280 RIIAD1A6NNX1 92 aa18.18■□□□□ 0.5
SEC23A-213ENST00000557280 M0R129 80 aa18.18■□□□□ 0.5
SEC23A-213ENST00000557280 SURF4O15260 269 aa18.18■□□□□ 0.5
SEC23A-213ENST00000557280 MGRN1O60291 552 aa18.18■□□□□ 0.5
SEC23A-213ENST00000557280 GYPBP06028 91 aa18.18■□□□□ 0.5
SEC23A-213ENST00000557280 CD3EP07766 207 aa18.18■□□□□ 0.5
SEC23A-213ENST00000557280 ZNF14P17017 642 aaPredicted RBP18.18■□□□□ 0.5
SEC23A-213ENST00000557280 MSR1P21757 451 aa18.18■□□□□ 0.5
SEC23A-213ENST00000557280 PTAFRP25105 342 aa18.18■□□□□ 0.5
SEC23A-213ENST00000557280 CENPAP49450 140 aa18.18■□□□□ 0.5
SEC23A-213ENST00000557280 RAB1AP62820 205 aa18.18■□□□□ 0.5
SEC23A-213ENST00000557280 DAG1Q14118 895 aa18.18■□□□□ 0.5
SEC23A-213ENST00000557280 RAB39AQ14964 217 aa18.18■□□□□ 0.5
SEC23A-213ENST00000557280 PTGES3Q15185 160 aaKnown RBP18.18■□□□□ 0.5
SEC23A-213ENST00000557280 C1QTNF12Q5T7M4 302 aa18.18■□□□□ 0.5
SEC23A-213ENST00000557280 LYPD4Q6UWN0 246 aa18.18■□□□□ 0.5
SEC23A-213ENST00000557280 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.18■□□□□ 0.5
SEC23A-213ENST00000557280 GLB1L2Q8IW92 636 aa18.18■□□□□ 0.5
SEC23A-213ENST00000557280 PIAS4Q8N2W9 510 aaPredicted RBP18.18■□□□□ 0.5
SEC23A-213ENST00000557280 OR51L1Q8NGJ5 315 aa18.18■□□□□ 0.5
SEC23A-213ENST00000557280 C11orf40Q8WZ69 217 aa18.18■□□□□ 0.5
SEC23A-213ENST00000557280 LURAP1Q96LR2 239 aa18.18■□□□□ 0.5
SEC23A-213ENST00000557280 SLC29A1Q99808 456 aa18.18■□□□□ 0.5
SEC23A-213ENST00000557280 RBM4BQ9BQ04 359 aaKnown RBP18.18■□□□□ 0.5
SEC23A-213ENST00000557280 FKBP7Q9Y680 259 aa18.18■□□□□ 0.5
SEC23A-213ENST00000557280 CACNA1DQ01668 2161 aa18.17■□□□□ 0.5
SEC23A-213ENST00000557280 APCP25054 2843 aa18.17■□□□□ 0.5
SEC23A-213ENST00000557280 ATP6V1G2-DDX39BF2Z307 99 aa18.17■□□□□ 0.5
SEC23A-213ENST00000557280 RAB36O95755 333 aa18.17■□□□□ 0.5
SEC23A-213ENST00000557280 ANPEPP15144 967 aa18.17■□□□□ 0.5
SEC23A-213ENST00000557280 ZNF3P17036 446 aa18.17■□□□□ 0.5
SEC23A-213ENST00000557280 ZNF32P17041 273 aa18.17■□□□□ 0.5
SEC23A-213ENST00000557280 CRABP1P29762 137 aa18.17■□□□□ 0.5
SEC23A-213ENST00000557280 CALCRP30988 508 aa18.17■□□□□ 0.5
SEC23A-213ENST00000557280 ARR3P36575 388 aa18.17■□□□□ 0.5
SEC23A-213ENST00000557280 ESRRGP62508 458 aa18.17■□□□□ 0.5
SEC23A-213ENST00000557280 NAAAQ02083 359 aa18.17■□□□□ 0.5
SEC23A-213ENST00000557280 SLC36A2Q495M3 483 aa18.17■□□□□ 0.5
SEC23A-213ENST00000557280 DNM1P34Q6PK57 102 aa18.17■□□□□ 0.5
SEC23A-213ENST00000557280 B3GLCTQ6Y288 498 aa18.17■□□□□ 0.5
SEC23A-213ENST00000557280 FAM169BQ8N8A8 192 aa18.17■□□□□ 0.5
SEC23A-213ENST00000557280 GABARAPL3Q9BY60 117 aa18.17■□□□□ 0.5
SEC23A-213ENST00000557280 RIBC2Q9H4K1 309 aa18.17■□□□□ 0.5
SEC23A-213ENST00000557280 USE1Q9NZ43 259 aa18.17■□□□□ 0.5
SEC23A-213ENST00000557280 MOKQ9UQ07 419 aa18.17■□□□□ 0.5
SEC23A-213ENST00000557280 CADP27708 2225 aa18.17■□□□□ 0.5
SEC23A-213ENST00000557280 ZAR1LA6NP61 321 aa18.16■□□□□ 0.5
SEC23A-213ENST00000557280 IFNGP01579 166 aa18.16■□□□□ 0.5
SEC23A-213ENST00000557280 TFP02787 698 aa18.16■□□□□ 0.5
SEC23A-213ENST00000557280 CST2P09228 141 aa18.16■□□□□ 0.5
SEC23A-213ENST00000557280 PSKH1P11801 424 aa18.16■□□□□ 0.5
SEC23A-213ENST00000557280 SPI1P17947 270 aa18.16■□□□□ 0.5
SEC23A-213ENST00000557280 ALDH3A2P51648 485 aa18.16■□□□□ 0.5
SEC23A-213ENST00000557280 PROKR2Q8NFJ6 384 aa18.16■□□□□ 0.5
SEC23A-213ENST00000557280 SLC26A10Q8NG04 563 aa18.16■□□□□ 0.5
SEC23A-213ENST00000557280 AKAP1Q92667 903 aaKnown RBP eCLIP18.16■□□□□ 0.5
SEC23A-213ENST00000557280 RNF121Q9H920 327 aa18.16■□□□□ 0.5
SEC23A-213ENST00000557280 UBTD1Q9HAC8 227 aa18.16■□□□□ 0.5
SEC23A-213ENST00000557280 CSMD2Q7Z408 3487 aa18.16■□□□□ 0.5
SEC23A-213ENST00000557280 SLC25A1P53007 311 aa18.15■□□□□ 0.5
SEC23A-213ENST00000557280 C3orf36Q3SXR2 165 aa18.15■□□□□ 0.5
SEC23A-213ENST00000557280 SLX4IPQ5VYV7 408 aa18.15■□□□□ 0.5
SEC23A-213ENST00000557280 PLBD1Q6P4A8 553 aa18.15■□□□□ 0.5
SEC23A-213ENST00000557280 BBS1Q8NFJ9 593 aa18.15■□□□□ 0.5
SEC23A-213ENST00000557280 AKR7LQ8NHP1 331 aa18.15■□□□□ 0.5
SEC23A-213ENST00000557280 C9orf16Q9BUW7 83 aa18.15■□□□□ 0.5
SEC23A-213ENST00000557280 WNT5BQ9H1J7 359 aa18.15■□□□□ 0.5
SEC23A-213ENST00000557280 CCNB1IP1Q9NPC3 277 aa18.15■□□□□ 0.5
SEC23A-213ENST00000557280 HINT3Q9NQE9 182 aaKnown RBP18.15■□□□□ 0.5
SEC23A-213ENST00000557280 MRPL22Q9NWU5 206 aaKnown RBP18.15■□□□□ 0.5
SEC23A-213ENST00000557280 TVP23BQ9NYZ1 205 aa18.15■□□□□ 0.5
SEC23A-213ENST00000557280 RAI1Q7Z5J4 1906 aaPredicted RBP18.15■□□□□ 0.5
SEC23A-213ENST00000557280 IGHV2OR16-5A0A0B4J2B6 119 aa18.14■□□□□ 0.49
SEC23A-213ENST00000557280 TVP23AA6NH52 213 aa18.14■□□□□ 0.49
SEC23A-213ENST00000557280 PRKYO43930 277 aa18.14■□□□□ 0.49
SEC23A-213ENST00000557280 CCL2P13500 99 aa18.14■□□□□ 0.49
SEC23A-213ENST00000557280 GUCA1AP43080 201 aaPredicted RBP18.14■□□□□ 0.49
SEC23A-213ENST00000557280 CDH11P55287 796 aa18.14■□□□□ 0.49
SEC23A-213ENST00000557280 PSG4Q00888 419 aa18.14■□□□□ 0.49
SEC23A-213ENST00000557280 KCNMB1Q16558 191 aa18.14■□□□□ 0.49
SEC23A-213ENST00000557280 ZIK1Q3SY52 487 aaPredicted RBP18.14■□□□□ 0.49
SEC23A-213ENST00000557280 PABPC1L2AQ5JQF8 200 aa18.14■□□□□ 0.49
SEC23A-213ENST00000557280 C12orf73Q69YU5 71 aa18.14■□□□□ 0.49
SEC23A-213ENST00000557280 TMEM53Q6P2H8 277 aa18.14■□□□□ 0.49
SEC23A-213ENST00000557280 SLC22A25Q6T423 547 aa18.14■□□□□ 0.49
SEC23A-213ENST00000557280 CPEB3Q8NE35 698 aaKnown RBP18.14■□□□□ 0.49
SEC23A-213ENST00000557280 OR2T4Q8NH00 348 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms