RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 RPL27P61353 136 aaKnown RBP13.53□□□□□ -0.24
TUBB3-213ENST00000557262 FMODQ06828 376 aa13.53□□□□□ -0.24
TUBB3-213ENST00000557262 TSTQ16762 297 aaKnown RBP13.53□□□□□ -0.24
TUBB3-213ENST00000557262 HFEQ30201 348 aa13.53□□□□□ -0.24
TUBB3-213ENST00000557262 LRRC23Q53EV4 343 aaPredicted RBP13.53□□□□□ -0.24
TUBB3-213ENST00000557262 AVPI1Q5T686 147 aa13.53□□□□□ -0.24
TUBB3-213ENST00000557262 SHQ1Q6PI26 577 aaKnown RBP13.53□□□□□ -0.24
TUBB3-213ENST00000557262 USP51Q70EK9 711 aa13.53□□□□□ -0.24
TUBB3-213ENST00000557262 ALDH16A1Q8IZ83 802 aa13.53□□□□□ -0.24
TUBB3-213ENST00000557262 ZNF101Q8IZC7 436 aa13.53□□□□□ -0.24
TUBB3-213ENST00000557262 OR2T12Q8NG77 320 aa13.53□□□□□ -0.24
TUBB3-213ENST00000557262 AKR7LQ8NHP1 331 aa13.53□□□□□ -0.24
TUBB3-213ENST00000557262 BPIFA2Q96DR5 249 aa13.53□□□□□ -0.24
TUBB3-213ENST00000557262 MARS2Q96GW9 593 aaKnown RBP13.53□□□□□ -0.24
TUBB3-213ENST00000557262 ZNF665Q9H7R5 613 aa13.53□□□□□ -0.24
TUBB3-213ENST00000557262 A4GNTQ9UNA3 340 aa13.53□□□□□ -0.24
TUBB3-213ENST00000557262 PIP5K1CO60331 668 aa13.52□□□□□ -0.25
TUBB3-213ENST00000557262 VENTXO95231 258 aa13.52□□□□□ -0.25
TUBB3-213ENST00000557262 CST2P09228 141 aa13.52□□□□□ -0.25
TUBB3-213ENST00000557262 WNT5AP41221 380 aa13.52□□□□□ -0.25
TUBB3-213ENST00000557262 CTXN1P60606 82 aa13.52□□□□□ -0.25
TUBB3-213ENST00000557262 ERVK-25P63136 954 aa13.52□□□□□ -0.25
TUBB3-213ENST00000557262 GLO1Q04760 184 aa13.52□□□□□ -0.25
TUBB3-213ENST00000557262 TOP3AQ13472 1001 aaPredicted RBP13.52□□□□□ -0.25
TUBB3-213ENST00000557262 FAM209AQ5JX71 171 aa13.52□□□□□ -0.25
TUBB3-213ENST00000557262 MEX3DQ86XN8 651 aaKnown RBP13.52□□□□□ -0.25
TUBB3-213ENST00000557262 MICU2Q8IYU8 434 aa13.52□□□□□ -0.25
TUBB3-213ENST00000557262 TEX29Q8N6K0 151 aa13.52□□□□□ -0.25
TUBB3-213ENST00000557262 SLC25A40Q8TBP6 338 aa13.52□□□□□ -0.25
TUBB3-213ENST00000557262 ZFAND2BQ8WV99 257 aa13.52□□□□□ -0.25
TUBB3-213ENST00000557262 LZICQ8WZA0 190 aa13.52□□□□□ -0.25
TUBB3-213ENST00000557262 GTF3AQ92664 365 aaKnown RBP13.52□□□□□ -0.25
TUBB3-213ENST00000557262 RAB1CQ92928 201 aa13.52□□□□□ -0.25
TUBB3-213ENST00000557262 RAB39BQ96DA2 213 aa13.52□□□□□ -0.25
TUBB3-213ENST00000557262 TIMD4Q96H15 378 aa13.52□□□□□ -0.25
TUBB3-213ENST00000557262 PRRC1Q96M27 445 aa13.52□□□□□ -0.25
TUBB3-213ENST00000557262 OR2H1Q9GZK4 316 aa13.52□□□□□ -0.25
TUBB3-213ENST00000557262 SAP30LQ9HAJ7 183 aa13.52□□□□□ -0.25
TUBB3-213ENST00000557262 WIPI2Q9Y4P8 454 aa13.52□□□□□ -0.25
TUBB3-213ENST00000557262 TIMM10BQ9Y5J6 103 aa13.52□□□□□ -0.25
TUBB3-213ENST00000557262 PLSCR5A0PG75 271 aa13.51□□□□□ -0.25
TUBB3-213ENST00000557262 ELOVL7A1L3X0 281 aa13.51□□□□□ -0.25
TUBB3-213ENST00000557262 CLDN25C9JDP6 229 aa13.51□□□□□ -0.25
TUBB3-213ENST00000557262 PLPP2O43688 288 aa13.51□□□□□ -0.25
TUBB3-213ENST00000557262 DEAF1O75398 565 aaPredicted RBP13.51□□□□□ -0.25
TUBB3-213ENST00000557262 MPZL1O95297 269 aa13.51□□□□□ -0.25
TUBB3-213ENST00000557262 PNPP00491 289 aa13.51□□□□□ -0.25
TUBB3-213ENST00000557262 IGHMP01871 453 aa13.51□□□□□ -0.25
TUBB3-213ENST00000557262 H2AFXP16104 143 aaPredicted RBP13.51□□□□□ -0.25
TUBB3-213ENST00000557262 LAP3P28838 519 aa13.51□□□□□ -0.25
TUBB3-213ENST00000557262 LIPAP38571 399 aa13.51□□□□□ -0.25
TUBB3-213ENST00000557262 MPV17P39210 176 aa13.51□□□□□ -0.25
TUBB3-213ENST00000557262 MMP15P51511 669 aa13.51□□□□□ -0.25
TUBB3-213ENST00000557262 PCBD1P61457 104 aa13.51□□□□□ -0.25
TUBB3-213ENST00000557262 SF3A3Q12874 501 aaKnown RBP eCLIP13.51□□□□□ -0.25
TUBB3-213ENST00000557262 ANKDD1AQ495B1 522 aa13.51□□□□□ -0.25
TUBB3-213ENST00000557262 SPATA46Q5T0L3 261 aa13.51□□□□□ -0.25
TUBB3-213ENST00000557262 MBNL2Q5VZF2 373 aaKnown RBP13.51□□□□□ -0.25
TUBB3-213ENST00000557262 FAM205BPQ63HN1 556 aa13.51□□□□□ -0.25
TUBB3-213ENST00000557262 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.51□□□□□ -0.25
TUBB3-213ENST00000557262 LRRC75AQ8NAA5 344 aa13.51□□□□□ -0.25
TUBB3-213ENST00000557262 KLF14Q8TD94 323 aaPredicted RBP13.51□□□□□ -0.25
TUBB3-213ENST00000557262 ZNF418Q8TF45 676 aaPredicted RBP13.51□□□□□ -0.25
TUBB3-213ENST00000557262 ELMOD3Q96FG2 381 aa13.51□□□□□ -0.25
TUBB3-213ENST00000557262 FNDC11Q9BVV2 318 aa13.51□□□□□ -0.25
TUBB3-213ENST00000557262 OR2J1Q9GZK6 312 aa13.51□□□□□ -0.25
TUBB3-213ENST00000557262 WNT5BQ9H1J7 359 aa13.51□□□□□ -0.25
TUBB3-213ENST00000557262 G6PC2Q9NQR9 355 aa13.51□□□□□ -0.25
TUBB3-213ENST00000557262 CYSLTR2Q9NS75 346 aa13.51□□□□□ -0.25
TUBB3-213ENST00000557262 KLHL21Q9UJP4 597 aa13.51□□□□□ -0.25
TUBB3-213ENST00000557262 CACNG2Q9Y698 323 aa13.51□□□□□ -0.25
TUBB3-213ENST00000557262 A6NIZ1 184 aa13.5□□□□□ -0.25
TUBB3-213ENST00000557262 SPRY3O43610 288 aa13.5□□□□□ -0.25
TUBB3-213ENST00000557262 IGHV1-46P01743 117 aa13.5□□□□□ -0.25
TUBB3-213ENST00000557262 MAKP20794 623 aa13.5□□□□□ -0.25
TUBB3-213ENST00000557262 YAP1P46937 504 aaKnown RBP13.5□□□□□ -0.25
TUBB3-213ENST00000557262 RAP1BP61224 184 aa13.5□□□□□ -0.25
TUBB3-213ENST00000557262 PPP1CBP62140 327 aa13.5□□□□□ -0.25
TUBB3-213ENST00000557262 RAP1AP62834 184 aa13.5□□□□□ -0.25
TUBB3-213ENST00000557262 PRKCDQ05655 676 aa13.5□□□□□ -0.25
TUBB3-213ENST00000557262 C12orf54Q6X4T0 127 aa13.5□□□□□ -0.25
TUBB3-213ENST00000557262 THSD4Q6ZMP0 1018 aa13.5□□□□□ -0.25
TUBB3-213ENST00000557262 C1orf229Q6ZS94 237 aaPredicted RBP13.5□□□□□ -0.25
TUBB3-213ENST00000557262 FOXL2NBQ6ZUU3 175 aa13.5□□□□□ -0.25
TUBB3-213ENST00000557262 SYT9Q86SS6 491 aa13.5□□□□□ -0.25
TUBB3-213ENST00000557262 OAFQ86UD1 273 aa13.5□□□□□ -0.25
TUBB3-213ENST00000557262 NRMQ8IXM6 262 aa13.5□□□□□ -0.25
TUBB3-213ENST00000557262 RNF113BQ8IZP6 322 aaKnown RBP13.5□□□□□ -0.25
TUBB3-213ENST00000557262 CLDN22Q8N7P3 220 aa13.5□□□□□ -0.25
TUBB3-213ENST00000557262 OR51A7Q8NH64 312 aa13.5□□□□□ -0.25
TUBB3-213ENST00000557262 IPCEF1Q8WWN9 437 aaPredicted RBP13.5□□□□□ -0.25
TUBB3-213ENST00000557262 CCL17Q92583 94 aa13.5□□□□□ -0.25
TUBB3-213ENST00000557262 EGLN1Q9GZT9 426 aa13.5□□□□□ -0.25
TUBB3-213ENST00000557262 ELOVL3Q9HB03 270 aa13.5□□□□□ -0.25
TUBB3-213ENST00000557262 FGFR1OP2Q9NVK5 253 aa13.5□□□□□ -0.25
TUBB3-213ENST00000557262 AP3M1Q9Y2T2 418 aa13.5□□□□□ -0.25
TUBB3-213ENST00000557262 TRAV27A0A087WT01 109 aa13.49□□□□□ -0.25
TUBB3-213ENST00000557262 A0A1W2PPL8 197 aa13.49□□□□□ -0.25
TUBB3-213ENST00000557262 EFCAB9A8MZ26 197 aa13.49□□□□□ -0.25
TUBB3-213ENST00000557262 ICMTO60725 284 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms