RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 GGTLC2Q14390 218 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 TOMM34Q15785 309 aaPredicted RBP3.99□□□□□ -1.77
SRP54-212ENST00000556992 INAQ16352 499 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 SGCBQ16585 318 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 NTRK2Q16620 822 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 ZNF791Q3KP31 576 aaPredicted RBP3.99□□□□□ -1.77
SRP54-212ENST00000556992 CCDC58Q4VC31 144 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 SLC25A53Q5H9E4 307 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 FAM69AQ5T7M9 428 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 OR2G6Q5TZ20 316 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 FAM69BQ5VUD6 431 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 TCEAL6Q6IPX3 200 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 TMEM81Q6P7N7 255 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 CD200R1LQ6Q8B3 271 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 PAQR6Q6TCH4 344 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 PAMR1Q6UXH9 720 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 PLEKHG7Q6ZR37 379 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 H1FNTQ75WM6 255 aaPredicted RBP3.99□□□□□ -1.77
SRP54-212ENST00000556992 RAB11FIP2Q7L804 512 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 NANOGNBQ7Z5D8 188 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 RPS19BP1Q86WX3 136 aaKnown RBP3.99□□□□□ -1.77
SRP54-212ENST00000556992 KLBQ86Z14 1044 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 NAXDQ8IW45 347 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 SYS1Q8N2H4 156 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 ESX1Q8N693 406 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 ARIH2OSQ8N7S6 290 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 SCAIQ8N9R8 606 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 TEX19Q8NA77 164 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 LRRC75AQ8NAA5 344 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 CYB561A3Q8NBI2 242 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 ATP6V1C2Q8NEY4 427 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 SEMA6DQ8NFY4 1073 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 OR5J2Q8NH18 312 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 MOSPD2Q8NHP6 518 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 MFSD8Q8NHS3 518 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 RNF138Q8WVD3 245 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 PHYHIPQ92561 330 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 AP3S1Q92572 193 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 TCEAL3Q969E4 200 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 TMEM203Q969S6 136 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 C8orf44Q96CB5 159 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 SLC25A36Q96CQ1 311 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 DDIT4LQ96D03 193 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 SPACA9Q96E40 222 aaPredicted RBP3.99□□□□□ -1.77
SRP54-212ENST00000556992 MRGPRX4Q96LA9 322 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 SGCZQ96LD1 299 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 ADAD1Q96M93 576 aaKnown RBP3.99□□□□□ -1.77
SRP54-212ENST00000556992 MOGAT1Q96PD6 335 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 SNX18Q96RF0 628 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 NMNAT3Q96T66 252 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 ZNF649Q9BS31 505 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 KATNB1Q9BVA0 655 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 ALG8Q9BVK2 526 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 HCAR1Q9BXC0 346 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 ANGPTL4Q9BY76 406 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 RTN4RQ9BZR6 473 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 B3GNT4Q9C0J1 378 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 C11orf54Q9H0W9 315 aaPredicted RBP3.99□□□□□ -1.77
SRP54-212ENST00000556992 KCNN2Q9H2S1 579 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 IFT22Q9H7X7 185 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 METTL7AQ9H8H3 244 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 MED20Q9H944 212 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 AKIRIN1Q9H9L7 192 aaPredicted RBP3.99□□□□□ -1.77
SRP54-212ENST00000556992 ADGRL4Q9HBW9 690 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 TMEM9BQ9NQ34 198 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 INIPQ9NRY2 104 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 TXNL4BQ9NX01 149 aaKnown RBP3.99□□□□□ -1.77
SRP54-212ENST00000556992 MRPL39Q9NYK5 338 aaKnown RBP3.99□□□□□ -1.77
SRP54-212ENST00000556992 TAS2R5Q9NYW4 299 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 KLRF1Q9NZS2 232 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 ZNF346Q9UL40 294 aaKnown RBP3.99□□□□□ -1.77
SRP54-212ENST00000556992 FARSAQ9Y285 508 aaKnown RBP3.99□□□□□ -1.77
SRP54-212ENST00000556992 LOXL2Q9Y4K0 774 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 UGT2A1Q9Y4X1 527 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 PCDHGA1Q9Y5H4 931 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 TMEM14AQ9Y6G1 99 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 ZFC3H1O60293 1989 aaKnown RBP3.99□□□□□ -1.77
SRP54-212ENST00000556992 TECTAO75443 2155 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 FREM2Q5SZK8 3169 aa3.98□□□□□ -1.77
SRP54-212ENST00000556992 ATG2AQ2TAZ0 1938 aa3.98□□□□□ -1.77
SRP54-212ENST00000556992 MYO9BQ13459 2157 aa3.98□□□□□ -1.77
SRP54-212ENST00000556992 CCDC187A0A096LP49 1063 aa3.98□□□□□ -1.77
SRP54-212ENST00000556992 TEX13CA0A0J9YWL9 993 aa3.98□□□□□ -1.77
SRP54-212ENST00000556992 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.98□□□□□ -1.77
SRP54-212ENST00000556992 A0A1W2PRG6 482 aa3.98□□□□□ -1.77
SRP54-212ENST00000556992 TMEM72A0PK05 275 aa3.98□□□□□ -1.77
SRP54-212ENST00000556992 ISPDA4D126 451 aa3.98□□□□□ -1.77
SRP54-212ENST00000556992 OR6C68A6NDL8 312 aa3.98□□□□□ -1.77
SRP54-212ENST00000556992 CCDC182A6NF36 153 aa3.98□□□□□ -1.77
SRP54-212ENST00000556992 C21orf140B9A014 251 aa3.98□□□□□ -1.77
SRP54-212ENST00000556992 LRRN3E7EW58 273 aa3.98□□□□□ -1.77
SRP54-212ENST00000556992 LOC110117498-PIK3R3F6TDL0 507 aa3.98□□□□□ -1.77
SRP54-212ENST00000556992 J3QLW9 94 aa3.98□□□□□ -1.77
SRP54-212ENST00000556992 CDX4O14627 284 aaPredicted RBP3.98□□□□□ -1.77
SRP54-212ENST00000556992 OGG1O15527 345 aa3.98□□□□□ -1.77
SRP54-212ENST00000556992 SEC14L5O43304 696 aa3.98□□□□□ -1.77
SRP54-212ENST00000556992 PLPP2O43688 288 aa3.98□□□□□ -1.77
SRP54-212ENST00000556992 GMFGO60234 142 aa3.98□□□□□ -1.77
SRP54-212ENST00000556992 CBFA2T3O75081 653 aa3.98□□□□□ -1.77
SRP54-212ENST00000556992 CBR3O75828 277 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms