RNA–Protein interactions for RNA: ENST00000556846.1

PCNX1-213, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 506 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-213ENST00000556846 DECR2Q9NUI1 292 aa6.16□□□□□ -1.42
PCNX1-213ENST00000556846 ARMCX1Q9P291 453 aa6.16□□□□□ -1.42
PCNX1-213ENST00000556846 MYEF2Q9P2K5 600 aaKnown RBP6.16□□□□□ -1.42
PCNX1-213ENST00000556846 CSPG4Q6UVK1 2322 aa6.16□□□□□ -1.42
PCNX1-213ENST00000556846 A0A1W2PPL8 197 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 PLSCR5A0PG75 271 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 C5orf49A4QMS7 147 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 HTR3EA5X5Y0 456 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 GMNCA6NCL1 334 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 C17orf100A8MU93 164 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 B4DSR2 109 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 CXCR6O00574 342 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 SLC22A2O15244 555 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 CCDC22O60826 627 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 IGF2P01344 180 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 IFNW1P05000 195 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 IGFBP1P08833 259 aaPredicted RBP6.15□□□□□ -1.42
PCNX1-213ENST00000556846 COX4I1P13073 169 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 ZNF32P17041 273 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 THBS2P35442 1172 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 RPL4P36578 427 aaKnown RBP6.15□□□□□ -1.42
PCNX1-213ENST00000556846 MAGEB1P43366 347 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 CDH15P55291 814 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 RPL27P61353 136 aaKnown RBP6.15□□□□□ -1.42
PCNX1-213ENST00000556846 PCBD1P61457 104 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 ERVS71-1P61550 626 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 ERVK-25P63136 954 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 CCL8P80075 99 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 MRPS34P82930 218 aaKnown RBP6.15□□□□□ -1.42
PCNX1-213ENST00000556846 TEKQ02763 1124 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 MVKQ03426 396 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 GLO1Q04760 184 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 FMODQ06828 376 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 TRAM2Q15035 370 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 TAF11Q15544 211 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 TSTQ16762 297 aaKnown RBP6.15□□□□□ -1.42
PCNX1-213ENST00000556846 PCGF3Q3KNV8 242 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 ELFN2Q5R3F8 820 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 THEM4Q5T1C6 240 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 ARMC4Q5T2S8 1044 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 RINLQ6ZS11 566 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 C8orf86Q6ZUL3 223 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 OAFQ86UD1 273 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 IGFN1Q86VF2 1251 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 GLCCI1Q86VQ1 547 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 CYP4Z1Q86W10 505 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 NRMQ8IXM6 262 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 PAQR4Q8N4S7 273 aaPredicted RBP6.15□□□□□ -1.42
PCNX1-213ENST00000556846 FNDC8Q8TC99 324 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 LIPHQ8WWY8 451 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 HDAC2Q92769 488 aaKnown RBP6.15□□□□□ -1.42
PCNX1-213ENST00000556846 FAM162AQ96A26 154 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 HOPXQ9BPY8 73 aaPredicted RBP6.15□□□□□ -1.42
PCNX1-213ENST00000556846 ZNF416Q9BWM5 594 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 NDEL1Q9GZM8 345 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 TXNIPQ9H3M7 391 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 EFCAB1Q9HAE3 211 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 SMURF2Q9HAU4 748 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 ZNF275Q9NSD4 429 aaPredicted RBP6.15□□□□□ -1.42
PCNX1-213ENST00000556846 CMTM6Q9NX76 183 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 TREM2Q9NZC2 230 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 GRHPRQ9UBQ7 328 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 FAM32AQ9Y421 112 aaKnown RBP6.15□□□□□ -1.42
PCNX1-213ENST00000556846 TIMM10BQ9Y5J6 103 aa6.15□□□□□ -1.42
PCNX1-213ENST00000556846 ZFHX3Q15911 3703 aa6.15□□□□□ -1.43
PCNX1-213ENST00000556846 TRAV27A0A087WT01 109 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 A6NIZ1 184 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 J3KTA2 159 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 NDUFAB1O14561 156 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 XKRYO14609 159 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 SPRY3O43610 288 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 GMNNO75496 209 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 SNAP29O95721 258 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 SERPINA1P01009 418 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 ANPEPP15144 967 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 ZNF250P15622 560 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 MAKP20794 623 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 LAP3P28838 519 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 ZNF81P51508 661 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 ARHGDIAP52565 204 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 SLC7A2P52569 658 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 DVL1P1P54792 670 aaPredicted RBP6.14□□□□□ -1.43
PCNX1-213ENST00000556846 RAP1BP61224 184 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 RAP1AP62834 184 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 MRPS11P82912 194 aaKnown RBP6.14□□□□□ -1.43
PCNX1-213ENST00000556846 PSG4Q00888 419 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 SRSF2Q01130 221 aaKnown RBP6.14□□□□□ -1.43
PCNX1-213ENST00000556846 PRKCDQ05655 676 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 HFEQ30201 348 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 ZNF718Q3SXZ3 478 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 IFI44LQ53G44 452 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 SPATA46Q5T0L3 261 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 C10orf128Q5T292 105 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 AVPI1Q5T686 147 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 FAM27BQ5VT28 67 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 FAM205BPQ63HN1 556 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 CGB2Q6NT52 195 aa6.14□□□□□ -1.43
PCNX1-213ENST00000556846 FAHD2BQ6P2I3 314 aaPredicted RBP6.14□□□□□ -1.43
PCNX1-213ENST00000556846 SHQ1Q6PI26 577 aaKnown RBP6.14□□□□□ -1.43
PCNX1-213ENST00000556846 SLC25A47Q6Q0C1 308 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms