RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 CCNB1IP1Q9NPC3 277 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 CMTM6Q9NX76 183 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 ADA2Q9NZK5 511 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 EIF3KQ9UBQ5 218 aaKnown RBP6.33□□□□□ -1.4
SCFD1-222ENST00000556768 CDC42EP3Q9UKI2 254 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 ZNF346Q9UL40 294 aaKnown RBP6.33□□□□□ -1.4
SCFD1-222ENST00000556768 PLCE1Q9P212 2302 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 ALPK2Q86TB3 2170 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 A0A1W2PPW3 197 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 A6NIZ1 184 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 EFCAB9A8MZ26 197 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 XKRYO14609 159 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 LY6HO94772 140 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 SERPINA1P01009 418 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 ADRA2AP08913 450 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 ZNF35P13682 527 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 ITGA2P17301 1181 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 RPL4P36578 427 aaKnown RBP6.32□□□□□ -1.4
SCFD1-222ENST00000556768 NR4A2P43354 598 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 YAP1P46937 504 aaKnown RBP6.32□□□□□ -1.4
SCFD1-222ENST00000556768 SLC9A3P48764 834 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 UGT2B15P54855 530 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 RAP1BP61224 184 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 PCBD1P61457 104 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 RAP1AP62834 184 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 VLDLRP98155 873 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 RAB39AQ14964 217 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 SGCAQ16586 387 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 ARL9Q6T311 187 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 UGT2A3Q6UWM9 527 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 VTCN1Q7Z7D3 282 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 TSPYL5Q86VY4 417 aaPredicted RBP6.32□□□□□ -1.4
SCFD1-222ENST00000556768 C1orf174Q8IYL3 243 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 LRRC18Q8N456 261 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 NOXO1Q8NFA2 376 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 OR51A7Q8NH64 312 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 ASB10Q8WXI3 467 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 ACOT11Q8WXI4 607 aaPredicted RBP6.32□□□□□ -1.4
SCFD1-222ENST00000556768 MRPL24Q96A35 216 aaKnown RBP6.32□□□□□ -1.4
SCFD1-222ENST00000556768 FOXN4Q96NZ1 517 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 ZNF347Q96SE7 839 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 DOK1Q99704 481 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 MRPL13Q9BYD1 178 aaKnown RBP6.32□□□□□ -1.4
SCFD1-222ENST00000556768 BCL2L14Q9BZR8 327 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 C20orf141Q9NUB4 165 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 GRHPRQ9UBQ7 328 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 A4GNTQ9UNA3 340 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 SAMD4AQ9UPU9 718 aaKnown RBP6.32□□□□□ -1.4
SCFD1-222ENST00000556768 FN1P02751 2386 aaKnown RBP6.32□□□□□ -1.4
SCFD1-222ENST00000556768 ZNF503-AS2A6NEH8 195 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 GPRIN2O60269 458 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 TRMUO75648 421 aaKnown RBP6.32□□□□□ -1.4
SCFD1-222ENST00000556768 LCKP06239 509 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 PATE4P0C8F1 98 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 APEHP13798 732 aaKnown RBP6.32□□□□□ -1.4
SCFD1-222ENST00000556768 HNF1AP20823 631 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 DRD4P21917 467 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 CCNOP22674 350 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 PRDX6P30041 224 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 GSK3BP49841 420 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 MNAT1P51948 309 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 SMIM11AP58511 58 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 CTXN1P60606 82 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 PSME3P61289 254 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 RPL27P61353 136 aaKnown RBP6.32□□□□□ -1.4
SCFD1-222ENST00000556768 MYBPC1Q00872 1141 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 TOP3AQ13472 1001 aaPredicted RBP6.32□□□□□ -1.4
SCFD1-222ENST00000556768 HIST3H3Q16695 136 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 NKPD1Q17RQ9 610 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 RGS7BPQ6MZT1 257 aaPredicted RBP6.32□□□□□ -1.4
SCFD1-222ENST00000556768 TMEM154Q6P9G4 183 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 PODNL1Q6PEZ8 512 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 CBLL1Q75N03 491 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 MYPOPQ86VE0 399 aaPredicted RBP6.32□□□□□ -1.4
SCFD1-222ENST00000556768 HIPK1Q86Z02 1210 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 NRMQ8IXM6 262 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 OFCC1Q8IZS5 231 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 SNX33Q8WV41 574 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 NSMAFQ92636 917 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 MCUR1Q96AQ8 359 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 LRRC37BQ96QE4 947 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 ALG12Q9BV10 488 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 ANKRD19PQ9H560 264 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 SEC61A2Q9H9S3 476 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 NMNAT1Q9HAN9 279 aaPredicted RBP6.32□□□□□ -1.4
SCFD1-222ENST00000556768 NDE1Q9NXR1 346 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 SLCO1C1Q9NYB5 712 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 RHCGQ9UBD6 479 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 LPAR3Q9UBY5 353 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 TMEM5Q9Y2B1 443 aa6.32□□□□□ -1.4
SCFD1-222ENST00000556768 SONP18583 2426 aaKnown RBP6.31□□□□□ -1.4
SCFD1-222ENST00000556768 F8W735 103 aaPredicted RBP6.31□□□□□ -1.4
SCFD1-222ENST00000556768 NME4O00746 187 aa6.31□□□□□ -1.4
SCFD1-222ENST00000556768 SNAP29O95721 258 aa6.31□□□□□ -1.4
SCFD1-222ENST00000556768 RHCEP18577 417 aa6.31□□□□□ -1.4
SCFD1-222ENST00000556768 STOMP27105 288 aa6.31□□□□□ -1.4
SCFD1-222ENST00000556768 GCH1P30793 250 aa6.31□□□□□ -1.4
SCFD1-222ENST00000556768 SEC24CP53992 1094 aa6.31□□□□□ -1.4
SCFD1-222ENST00000556768 UCP2P55851 309 aa6.31□□□□□ -1.4
SCFD1-222ENST00000556768 KLF3P57682 345 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms