RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 ERVK-25P63136 954 aa19.27■□□□□ 0.68
ACTN1-220ENST00000556433 TEKQ02763 1124 aa19.27■□□□□ 0.68
ACTN1-220ENST00000556433 TSTQ16762 297 aaKnown RBP19.27■□□□□ 0.68
ACTN1-220ENST00000556433 ZNF718Q3SXZ3 478 aa19.27■□□□□ 0.68
ACTN1-220ENST00000556433 THEM4Q5T1C6 240 aa19.27■□□□□ 0.68
ACTN1-220ENST00000556433 IGFN1Q86VF2 1251 aa19.27■□□□□ 0.68
ACTN1-220ENST00000556433 MEX3DQ86XN8 651 aaKnown RBP19.27■□□□□ 0.68
ACTN1-220ENST00000556433 CLDN22Q8N7P3 220 aa19.27■□□□□ 0.68
ACTN1-220ENST00000556433 OR51F2Q8NH61 342 aa19.27■□□□□ 0.68
ACTN1-220ENST00000556433 OR51A7Q8NH64 312 aa19.27■□□□□ 0.68
ACTN1-220ENST00000556433 RCN3Q96D15 328 aa19.27■□□□□ 0.68
ACTN1-220ENST00000556433 FNDC11Q9BVV2 318 aa19.27■□□□□ 0.68
ACTN1-220ENST00000556433 ARMCX1Q9P291 453 aa19.27■□□□□ 0.68
ACTN1-220ENST00000556433 GMPR2Q9P2T1 348 aaKnown RBP19.27■□□□□ 0.68
ACTN1-220ENST00000556433 AP3M1Q9Y2T2 418 aa19.27■□□□□ 0.68
ACTN1-220ENST00000556433 SNX13Q9Y5W8 968 aa19.27■□□□□ 0.68
ACTN1-220ENST00000556433 LOC100509620A0A075B734 347 aa19.26■□□□□ 0.67
ACTN1-220ENST00000556433 IGHV1-69-2A0A0G2JMI3 117 aa19.26■□□□□ 0.67
ACTN1-220ENST00000556433 LAP3P28838 519 aa19.26■□□□□ 0.67
ACTN1-220ENST00000556433 GCH1P30793 250 aa19.26■□□□□ 0.67
ACTN1-220ENST00000556433 WNT5AP41221 380 aa19.26■□□□□ 0.67
ACTN1-220ENST00000556433 GUCA1AP43080 201 aaPredicted RBP19.26■□□□□ 0.67
ACTN1-220ENST00000556433 MVKQ03426 396 aa19.26■□□□□ 0.67
ACTN1-220ENST00000556433 TRAM2Q15035 370 aa19.26■□□□□ 0.67
ACTN1-220ENST00000556433 SPATA46Q5T0L3 261 aa19.26■□□□□ 0.67
ACTN1-220ENST00000556433 AVPI1Q5T686 147 aa19.26■□□□□ 0.67
ACTN1-220ENST00000556433 UNQ6126/PRO20091Q6UXV3 157 aa19.26■□□□□ 0.67
ACTN1-220ENST00000556433 VTCN1Q7Z7D3 282 aa19.26■□□□□ 0.67
ACTN1-220ENST00000556433 NRMQ8IXM6 262 aa19.26■□□□□ 0.67
ACTN1-220ENST00000556433 ZNF101Q8IZC7 436 aa19.26■□□□□ 0.67
ACTN1-220ENST00000556433 POU5F2Q8N7G0 328 aa19.26■□□□□ 0.67
ACTN1-220ENST00000556433 LRRC75AQ8NAA5 344 aa19.26■□□□□ 0.67
ACTN1-220ENST00000556433 FNDC8Q8TC99 324 aa19.26■□□□□ 0.67
ACTN1-220ENST00000556433 LRRC37BQ96QE4 947 aa19.26■□□□□ 0.67
ACTN1-220ENST00000556433 OCEL1Q9H607 264 aa19.26■□□□□ 0.67
ACTN1-220ENST00000556433 METTL17Q9H7H0 456 aaPredicted RBP19.26■□□□□ 0.67
ACTN1-220ENST00000556433 J3KTA2 159 aa19.25■□□□□ 0.67
ACTN1-220ENST00000556433 IGHMP01871 453 aa19.25■□□□□ 0.67
ACTN1-220ENST00000556433 IFNW1P05000 195 aa19.25■□□□□ 0.67
ACTN1-220ENST00000556433 ITGA2P17301 1181 aa19.25■□□□□ 0.67
ACTN1-220ENST00000556433 ZNF81P51508 661 aa19.25■□□□□ 0.67
ACTN1-220ENST00000556433 PRKCDQ05655 676 aa19.25■□□□□ 0.67
ACTN1-220ENST00000556433 USP51Q70EK9 711 aa19.25■□□□□ 0.67
ACTN1-220ENST00000556433 OAFQ86UD1 273 aa19.25■□□□□ 0.67
ACTN1-220ENST00000556433 SLC15A3Q8IY34 581 aa19.25■□□□□ 0.67
ACTN1-220ENST00000556433 ALDH16A1Q8IZ83 802 aa19.25■□□□□ 0.67
ACTN1-220ENST00000556433 OFCC1Q8IZS5 231 aa19.25■□□□□ 0.67
ACTN1-220ENST00000556433 RP9Q8TA86 221 aaKnown RBP19.25■□□□□ 0.67
ACTN1-220ENST00000556433 MARS2Q96GW9 593 aaKnown RBP19.25■□□□□ 0.67
ACTN1-220ENST00000556433 OR2H1Q9GZK4 316 aa19.25■□□□□ 0.67
ACTN1-220ENST00000556433 WNT5BQ9H1J7 359 aa19.25■□□□□ 0.67
ACTN1-220ENST00000556433 MAN2C1Q9NTJ4 1040 aa19.25■□□□□ 0.67
ACTN1-220ENST00000556433 TIMM10BQ9Y5J6 103 aa19.25■□□□□ 0.67
ACTN1-220ENST00000556433 TRAV27A0A087WT01 109 aa19.24■□□□□ 0.67
ACTN1-220ENST00000556433 A6NIZ1 184 aa19.24■□□□□ 0.67
ACTN1-220ENST00000556433 EFCAB9A8MZ26 197 aa19.24■□□□□ 0.67
ACTN1-220ENST00000556433 SLC22A2O15244 555 aa19.24■□□□□ 0.67
ACTN1-220ENST00000556433 SPRY3O43610 288 aa19.24■□□□□ 0.67
ACTN1-220ENST00000556433 ZNF682O95780 498 aa19.24■□□□□ 0.67
ACTN1-220ENST00000556433 CST2P09228 141 aa19.24■□□□□ 0.67
ACTN1-220ENST00000556433 ANPEPP15144 967 aa19.24■□□□□ 0.67
ACTN1-220ENST00000556433 MPV17P39210 176 aa19.24■□□□□ 0.67
ACTN1-220ENST00000556433 RAP1BP61224 184 aa19.24■□□□□ 0.67
ACTN1-220ENST00000556433 RAP1AP62834 184 aa19.24■□□□□ 0.67
ACTN1-220ENST00000556433 LIPEQ05469 1076 aa19.24■□□□□ 0.67
ACTN1-220ENST00000556433 FAM205BPQ63HN1 556 aa19.24■□□□□ 0.67
ACTN1-220ENST00000556433 FAHD2BQ6P2I3 314 aaPredicted RBP19.24■□□□□ 0.67
ACTN1-220ENST00000556433 ARPINQ7Z6K5 226 aa19.24■□□□□ 0.67
ACTN1-220ENST00000556433 SLC25A40Q8TBP6 338 aa19.24■□□□□ 0.67
ACTN1-220ENST00000556433 FAHD2AQ96GK7 314 aa19.24■□□□□ 0.67
ACTN1-220ENST00000556433 ZNF665Q9H7R5 613 aa19.24■□□□□ 0.67
ACTN1-220ENST00000556433 SAP30LQ9HAJ7 183 aa19.24■□□□□ 0.67
ACTN1-220ENST00000556433 TRAV20A0A0B4J274 112 aa19.23■□□□□ 0.67
ACTN1-220ENST00000556433 A0A1W2PPL8 197 aa19.23■□□□□ 0.67
ACTN1-220ENST00000556433 CXCR6O00574 342 aa19.23■□□□□ 0.67
ACTN1-220ENST00000556433 FFAR1O14842 300 aa19.23■□□□□ 0.67
ACTN1-220ENST00000556433 GSTA4O15217 222 aa19.23■□□□□ 0.67
ACTN1-220ENST00000556433 PCBD1P61457 104 aa19.23■□□□□ 0.67
ACTN1-220ENST00000556433 GUCY1A3Q02108 690 aa19.23■□□□□ 0.67
ACTN1-220ENST00000556433 HFEQ30201 348 aa19.23■□□□□ 0.67
ACTN1-220ENST00000556433 ANKDD1AQ495B1 522 aa19.23■□□□□ 0.67
ACTN1-220ENST00000556433 ACSM5Q6NUN0 579 aa19.23■□□□□ 0.67
ACTN1-220ENST00000556433 SHQ1Q6PI26 577 aaKnown RBP19.23■□□□□ 0.67
ACTN1-220ENST00000556433 RNF113BQ8IZP6 322 aaKnown RBP19.23■□□□□ 0.67
ACTN1-220ENST00000556433 ABHD4Q8TB40 342 aa19.23■□□□□ 0.67
ACTN1-220ENST00000556433 KLF14Q8TD94 323 aaPredicted RBP19.23■□□□□ 0.67
ACTN1-220ENST00000556433 IPCEF1Q8WWN9 437 aaPredicted RBP19.23■□□□□ 0.67
ACTN1-220ENST00000556433 OR2J1Q9GZK6 312 aa19.23■□□□□ 0.67
ACTN1-220ENST00000556433 CACNG2Q9Y698 323 aa19.23■□□□□ 0.67
ACTN1-220ENST00000556433 PLSCR5A0PG75 271 aa19.22■□□□□ 0.67
ACTN1-220ENST00000556433 CLDN25C9JDP6 229 aa19.22■□□□□ 0.67
ACTN1-220ENST00000556433 HAX1O00165 279 aa19.22■□□□□ 0.67
ACTN1-220ENST00000556433 IGHV1-46P01743 117 aa19.22■□□□□ 0.67
ACTN1-220ENST00000556433 MMP15P51511 669 aa19.22■□□□□ 0.67
ACTN1-220ENST00000556433 FHL1Q13642 323 aa19.22■□□□□ 0.67
ACTN1-220ENST00000556433 IFI44LQ53G44 452 aa19.22■□□□□ 0.67
ACTN1-220ENST00000556433 MBNL2Q5VZF2 373 aaKnown RBP19.22■□□□□ 0.67
ACTN1-220ENST00000556433 ZNF774Q6NX45 483 aa19.22■□□□□ 0.67
ACTN1-220ENST00000556433 ZNF730Q6ZMV8 503 aa19.22■□□□□ 0.67
ACTN1-220ENST00000556433 FOXL2NBQ6ZUU3 175 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms