RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 TBC1D28Q2M2D7 210 aa9.95□□□□□ -0.82
SLIRP-206ENST00000556375 ZNF620Q6ZNG0 422 aa9.95□□□□□ -0.82
SLIRP-206ENST00000556375 LINC00471Q8N535 108 aa9.95□□□□□ -0.82
SLIRP-206ENST00000556375 OR4C15Q8NGM1 316 aa9.95□□□□□ -0.82
SLIRP-206ENST00000556375 OR1J2Q8NGS2 313 aa9.95□□□□□ -0.82
SLIRP-206ENST00000556375 GNPDA2Q8TDQ7 276 aa9.95□□□□□ -0.82
SLIRP-206ENST00000556375 SLC7A6OSQ96CW6 309 aaPredicted RBP9.95□□□□□ -0.82
SLIRP-206ENST00000556375 CDH20Q9HBT6 801 aa9.95□□□□□ -0.82
SLIRP-206ENST00000556375 VSX1Q9NZR4 365 aaPredicted RBP9.95□□□□□ -0.82
SLIRP-206ENST00000556375 IL20RAQ9UHF4 553 aa9.95□□□□□ -0.82
SLIRP-206ENST00000556375 CMAHPQ9Y471 501 aa9.95□□□□□ -0.82
SLIRP-206ENST00000556375 IER3IP1Q9Y5U9 82 aa9.95□□□□□ -0.82
SLIRP-206ENST00000556375 FKBP7Q9Y680 259 aa9.95□□□□□ -0.82
SLIRP-206ENST00000556375 RTTNQ86VV8 2226 aa9.95□□□□□ -0.82
SLIRP-206ENST00000556375 CSPG4Q6UVK1 2322 aa9.95□□□□□ -0.82
SLIRP-206ENST00000556375 AQP12BA6NM10 295 aa9.94□□□□□ -0.82
SLIRP-206ENST00000556375 SOCS2O14508 198 aa9.94□□□□□ -0.82
SLIRP-206ENST00000556375 IMPA2O14732 288 aa9.94□□□□□ -0.82
SLIRP-206ENST00000556375 ARPC3O15145 178 aa9.94□□□□□ -0.82
SLIRP-206ENST00000556375 PPP1R3DO95685 299 aa9.94□□□□□ -0.82
SLIRP-206ENST00000556375 CSF3P09919 207 aa9.94□□□□□ -0.82
SLIRP-206ENST00000556375 RAP2AP10114 183 aa9.94□□□□□ -0.82
SLIRP-206ENST00000556375 CTLA4P16410 223 aa9.94□□□□□ -0.82
SLIRP-206ENST00000556375 HOXB6P17509 224 aaKnown RBP9.94□□□□□ -0.82
SLIRP-206ENST00000556375 LAP3P28838 519 aa9.94□□□□□ -0.82
SLIRP-206ENST00000556375 APLNRP35414 380 aa9.94□□□□□ -0.82
SLIRP-206ENST00000556375 EVX1P49640 407 aa9.94□□□□□ -0.82
SLIRP-206ENST00000556375 DSCR9P59020 149 aa9.94□□□□□ -0.82
SLIRP-206ENST00000556375 PCBD1P61457 104 aa9.94□□□□□ -0.82
SLIRP-206ENST00000556375 ENDOGQ14249 297 aaKnown RBP9.94□□□□□ -0.82
SLIRP-206ENST00000556375 RFX4Q33E94 735 aa9.94□□□□□ -0.82
SLIRP-206ENST00000556375 PABPC1L2AQ5JQF8 200 aa9.94□□□□□ -0.82
SLIRP-206ENST00000556375 OR2T5Q6IEZ7 315 aa9.94□□□□□ -0.82
SLIRP-206ENST00000556375 RPL13AP3Q6NVV1 102 aa9.94□□□□□ -0.82
SLIRP-206ENST00000556375 PGM2L1Q6PCE3 622 aa9.94□□□□□ -0.82
SLIRP-206ENST00000556375 CLEC2AQ6UVW9 174 aa9.94□□□□□ -0.82
SLIRP-206ENST00000556375 PTCHD4Q6ZW05 846 aa9.94□□□□□ -0.82
SLIRP-206ENST00000556375 AQP12AQ8IXF9 295 aa9.94□□□□□ -0.82
SLIRP-206ENST00000556375 ADGRG5Q8IZF4 528 aa9.94□□□□□ -0.82
SLIRP-206ENST00000556375 SVOPLQ8N434 492 aa9.94□□□□□ -0.82
SLIRP-206ENST00000556375 PAQR4Q8N4S7 273 aaPredicted RBP9.94□□□□□ -0.82
SLIRP-206ENST00000556375 OR9Q2Q8NGE9 314 aa9.94□□□□□ -0.82
SLIRP-206ENST00000556375 OR2T29Q8NH02 315 aa9.94□□□□□ -0.82
SLIRP-206ENST00000556375 MRPL24Q96A35 216 aaKnown RBP9.94□□□□□ -0.82
SLIRP-206ENST00000556375 SORCS2Q96PQ0 1159 aa9.94□□□□□ -0.82
SLIRP-206ENST00000556375 SMR3AQ99954 134 aa9.94□□□□□ -0.82
SLIRP-206ENST00000556375 BTBD10Q9BSF8 475 aa9.94□□□□□ -0.82
SLIRP-206ENST00000556375 WACQ9BTA9 647 aa9.94□□□□□ -0.82
SLIRP-206ENST00000556375 SYT4Q9H2B2 425 aa9.94□□□□□ -0.82
SLIRP-206ENST00000556375 LRMDAQ9H2I8 198 aa9.94□□□□□ -0.82
SLIRP-206ENST00000556375 REEP1Q9H902 201 aa9.94□□□□□ -0.82
SLIRP-206ENST00000556375 POLE4Q9NR33 117 aa9.94□□□□□ -0.82
SLIRP-206ENST00000556375 TMEM129A0AVI4 362 aa9.93□□□□□ -0.82
SLIRP-206ENST00000556375 DHRS12A0PJE2 317 aa9.93□□□□□ -0.82
SLIRP-206ENST00000556375 C12orf71A8MTZ7 269 aa9.93□□□□□ -0.82
SLIRP-206ENST00000556375 SMAD7O15105 426 aaKnown RBP9.93□□□□□ -0.82
SLIRP-206ENST00000556375 DNAJC8O75937 253 aaPredicted RBP9.93□□□□□ -0.82
SLIRP-206ENST00000556375 CCNB2O95067 398 aa9.93□□□□□ -0.82
SLIRP-206ENST00000556375 CCL2P13500 99 aa9.93□□□□□ -0.82
SLIRP-206ENST00000556375 APEX1P27695 318 aaKnown RBP9.93□□□□□ -0.82
SLIRP-206ENST00000556375 PCSK6P29122 969 aa9.93□□□□□ -0.82
SLIRP-206ENST00000556375 RIPPLY3P57055 190 aa9.93□□□□□ -0.82
SLIRP-206ENST00000556375 GK3PQ14409 553 aa9.93□□□□□ -0.82
SLIRP-206ENST00000556375 MSMPQ1L6U9 139 aa9.93□□□□□ -0.82
SLIRP-206ENST00000556375 ZNF770Q6IQ21 691 aaPredicted RBP9.93□□□□□ -0.82
SLIRP-206ENST00000556375 DNM1P34Q6PK57 102 aa9.93□□□□□ -0.82
SLIRP-206ENST00000556375 CLEC9AQ6UXN8 241 aa9.93□□□□□ -0.82
SLIRP-206ENST00000556375 SYT9Q86SS6 491 aa9.93□□□□□ -0.82
SLIRP-206ENST00000556375 ZNF525Q8N782 197 aa9.93□□□□□ -0.82
SLIRP-206ENST00000556375 SAMD8Q96LT4 415 aa9.93□□□□□ -0.82
SLIRP-206ENST00000556375 ERMAPQ96PL5 475 aaPredicted RBP9.93□□□□□ -0.82
SLIRP-206ENST00000556375 SNX18Q96RF0 628 aa9.93□□□□□ -0.82
SLIRP-206ENST00000556375 DOK1Q99704 481 aa9.93□□□□□ -0.82
SLIRP-206ENST00000556375 VRK1Q99986 396 aaPredicted RBP9.93□□□□□ -0.82
SLIRP-206ENST00000556375 RHNO1Q9BSD3 238 aa9.93□□□□□ -0.82
SLIRP-206ENST00000556375 IFT27Q9BW83 186 aa9.93□□□□□ -0.82
SLIRP-206ENST00000556375 ZNF416Q9BWM5 594 aa9.93□□□□□ -0.82
SLIRP-206ENST00000556375 MRPL37Q9BZE1 423 aaKnown RBP9.93□□□□□ -0.82
SLIRP-206ENST00000556375 OR2H1Q9GZK4 316 aa9.93□□□□□ -0.82
SLIRP-206ENST00000556375 WNT5BQ9H1J7 359 aa9.93□□□□□ -0.82
SLIRP-206ENST00000556375 GSX1Q9H4S2 264 aaPredicted RBP9.93□□□□□ -0.82
SLIRP-206ENST00000556375 DYNLRB1Q9NP97 96 aa9.93□□□□□ -0.82
SLIRP-206ENST00000556375 VNN3Q9NY84 501 aa9.93□□□□□ -0.82
SLIRP-206ENST00000556375 SAMHD1Q9Y3Z3 626 aaKnown RBP9.93□□□□□ -0.82
SLIRP-206ENST00000556375 CDH10Q9Y6N8 788 aa9.93□□□□□ -0.82
SLIRP-206ENST00000556375 NAV3Q8IVL0 2385 aa9.93□□□□□ -0.82
SLIRP-206ENST00000556375 RNF223E7ERA6 249 aa9.92□□□□□ -0.82
SLIRP-206ENST00000556375 IDH3BO43837 385 aa9.92□□□□□ -0.82
SLIRP-206ENST00000556375 SLC16A7O60669 478 aa9.92□□□□□ -0.82
SLIRP-206ENST00000556375 KHDRBS3O75525 346 aaKnown RBP9.92□□□□□ -0.82
SLIRP-206ENST00000556375 F12P00748 615 aaPredicted RBP9.92□□□□□ -0.82
SLIRP-206ENST00000556375 HEXAP06865 529 aa9.92□□□□□ -0.82
SLIRP-206ENST00000556375 FAM157BP0CG42 384 aa9.92□□□□□ -0.82
SLIRP-206ENST00000556375 STOMP27105 288 aa9.92□□□□□ -0.82
SLIRP-206ENST00000556375 CRABP1P29762 137 aa9.92□□□□□ -0.82
SLIRP-206ENST00000556375 CDKN2AP42771 156 aaKnown RBP9.92□□□□□ -0.82
SLIRP-206ENST00000556375 PSG4Q00888 419 aa9.92□□□□□ -0.82
SLIRP-206ENST00000556375 SCRN3Q0VDG4 424 aa9.92□□□□□ -0.82
SLIRP-206ENST00000556375 BNIP1Q12981 228 aa9.92□□□□□ -0.82
SLIRP-206ENST00000556375 FLOT2Q14254 428 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms