RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 BNIP2Q12982 314 aa5.72□□□□□ -1.49
ATXN3-236ENST00000556220 CAMK2DQ13557 499 aa5.72□□□□□ -1.49
ATXN3-236ENST00000556220 TMEM155Q4W5P6 130 aa5.72□□□□□ -1.49
ATXN3-236ENST00000556220 HSP90B2PQ58FF3 399 aa5.72□□□□□ -1.49
ATXN3-236ENST00000556220 PHYHD1Q5SRE7 291 aa5.72□□□□□ -1.49
ATXN3-236ENST00000556220 C1orf140Q5VVS0 124 aa5.72□□□□□ -1.49
ATXN3-236ENST00000556220 BTNL3Q6UXE8 466 aa5.72□□□□□ -1.49
ATXN3-236ENST00000556220 CCBE1Q6UXH8 406 aaPredicted RBP5.72□□□□□ -1.49
ATXN3-236ENST00000556220 BRD3OSQ6XYD6 125 aa5.72□□□□□ -1.49
ATXN3-236ENST00000556220 ZNF813Q6ZN06 617 aa5.72□□□□□ -1.49
ATXN3-236ENST00000556220 FRRS1Q6ZNA5 592 aa5.72□□□□□ -1.49
ATXN3-236ENST00000556220 LRRC28Q86X40 367 aaPredicted RBP5.72□□□□□ -1.49
ATXN3-236ENST00000556220 RNF130Q86XS8 419 aa5.72□□□□□ -1.49
ATXN3-236ENST00000556220 ZNF584Q8IVC4 421 aa5.72□□□□□ -1.49
ATXN3-236ENST00000556220 DDIASQ8IXT1 998 aa5.72□□□□□ -1.49
ATXN3-236ENST00000556220 C20orf196Q8IYI0 205 aa5.72□□□□□ -1.49
ATXN3-236ENST00000556220 CCNYL1Q8N7R7 359 aa5.72□□□□□ -1.49
ATXN3-236ENST00000556220 ZSCAN4Q8NAM6 433 aaPredicted RBP5.72□□□□□ -1.49
ATXN3-236ENST00000556220 CPEB3Q8NE35 698 aaKnown RBP5.72□□□□□ -1.49
ATXN3-236ENST00000556220 OR2T11Q8NH01 316 aa5.72□□□□□ -1.49
ATXN3-236ENST00000556220 SSMEM1Q8WWF3 244 aa5.72□□□□□ -1.49
ATXN3-236ENST00000556220 COQ8BQ96D53 544 aa5.72□□□□□ -1.49
ATXN3-236ENST00000556220 SLC47A1Q96FL8 570 aa5.72□□□□□ -1.49
ATXN3-236ENST00000556220 LRR1Q96L50 414 aa5.72□□□□□ -1.49
ATXN3-236ENST00000556220 OXGR1Q96P68 337 aa5.72□□□□□ -1.49
ATXN3-236ENST00000556220 OR2M2Q96R28 347 aa5.72□□□□□ -1.49
ATXN3-236ENST00000556220 OR14A2Q96R54 314 aa5.72□□□□□ -1.49
ATXN3-236ENST00000556220 OR52B2Q96RD2 323 aa5.72□□□□□ -1.49
ATXN3-236ENST00000556220 PRPF18Q99633 342 aaKnown RBP5.72□□□□□ -1.49
ATXN3-236ENST00000556220 LYSTQ99698 3801 aa5.72□□□□□ -1.49
ATXN3-236ENST00000556220 FAM107BQ9H098 131 aa5.72□□□□□ -1.49
ATXN3-236ENST00000556220 B3GAT1Q9P2W7 334 aa5.72□□□□□ -1.49
ATXN3-236ENST00000556220 OR5V1Q9UGF6 321 aa5.72□□□□□ -1.49
ATXN3-236ENST00000556220 PRDM4Q9UKN5 801 aa5.72□□□□□ -1.49
ATXN3-236ENST00000556220 POFUT2Q9Y2G5 429 aa5.72□□□□□ -1.49
ATXN3-236ENST00000556220 TRAV40A0A0B4J280 105 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 F5H0A9 414 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-236ENST00000556220 H0YL77 283 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 ZNF561-AS1K7EIQ3 104 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 SDHDO14521 159 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 LSM1O15116 133 aaKnown RBP5.71□□□□□ -1.5
ATXN3-236ENST00000556220 CFLARO15519 480 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 GPR137BO60478 399 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 NPIPB7O75200 414 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 AGR2O95994 175 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 IGHV1-46P01743 117 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 IGHV3-13P01766 116 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 SERPINE1P05121 402 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 LCKP06239 509 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 PATE4P0C8F1 98 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 OR8G3PP0DMU2 310 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 PNMTP11086 282 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 UQCRBP14927 111 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 CPA3P15088 417 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 B4GALT1P15291 398 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 UCP2P55851 309 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 ERVS71-1P61550 626 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 NAA20P61599 178 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 HBA1P69905 142 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 COL10A1Q03692 680 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 C1DQ13901 141 aaKnown RBP5.71□□□□□ -1.5
ATXN3-236ENST00000556220 ESCO2Q56NI9 601 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 ATAD3BQ5T9A4 648 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 LIPMQ5VYY2 423 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 Q6ZSV7 163 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 HMGN2P46Q86SG4 172 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 CROCCP2Q86T23 111 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 TMEM123Q8N131 208 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 CLEC4FQ8N1N0 589 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 PAQR4Q8N4S7 273 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-236ENST00000556220 FITM2Q8N6M3 262 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 SLC30A7Q8NEW0 376 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 MFSD8Q8NHS3 518 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 TBC1D15Q8TC07 691 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 MIPOL1Q8TD10 442 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 BCAS4Q8TDM0 211 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 XAGE5Q8WWM1 108 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 SGCDQ92629 289 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 ROPN1LQ96C74 230 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 NEURL3Q96EH8 262 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 DCLRE1CQ96SD1 692 aaKnown RBP5.71□□□□□ -1.5
ATXN3-236ENST00000556220 PAIP2Q9BPZ3 127 aaKnown RBP5.71□□□□□ -1.5
ATXN3-236ENST00000556220 BCL2L14Q9BZR8 327 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 EGLN1Q9GZT9 426 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 OR51I1Q9H343 314 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 C16orf95Q9H693 158 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 ATAD3AQ9NVI7 634 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 DCAF16Q9NXF7 216 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 MARCOQ9UEW3 520 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-236ENST00000556220 GPR45Q9Y5Y3 372 aa5.71□□□□□ -1.5
ATXN3-236ENST00000556220 IGHV2-70DA0A0C4DH43 119 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 KIR2DS1A0A191URI9 304 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 LOC102725191A0A1B0GVB3 256 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 ERICH4A6NGS2 130 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 TMEM114B3SHH9 223 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 FTCDNL1E5RQL4 147 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 TNFRSF13BO14836 293 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-236ENST00000556220 BIRC5O15392 142 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 TGDSO95455 350 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 C1QCP02747 245 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms