RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 VSTM5A8MXK1 200 aa17.64■□□□□ 0.41
VTI1B-205ENST00000555543 SOCS2O14508 198 aa17.64■□□□□ 0.41
VTI1B-205ENST00000555543 XKRYO14609 159 aa17.64■□□□□ 0.41
VTI1B-205ENST00000555543 SNAP29O95721 258 aa17.64■□□□□ 0.41
VTI1B-205ENST00000555543 FAM157BP0CG42 384 aa17.64■□□□□ 0.41
VTI1B-205ENST00000555543 CTLA4P16410 223 aa17.64■□□□□ 0.41
VTI1B-205ENST00000555543 FPR3P25089 353 aa17.64■□□□□ 0.41
VTI1B-205ENST00000555543 DSCR9P59020 149 aa17.64■□□□□ 0.41
VTI1B-205ENST00000555543 HSF2Q03933 536 aa17.64■□□□□ 0.41
VTI1B-205ENST00000555543 ENDOGQ14249 297 aaKnown RBP17.64■□□□□ 0.41
VTI1B-205ENST00000555543 SMARCD3Q6STE5 483 aa17.64■□□□□ 0.41
VTI1B-205ENST00000555543 PTCHD4Q6ZW05 846 aa17.64■□□□□ 0.41
VTI1B-205ENST00000555543 TRPM8Q7Z2W7 1104 aa17.64■□□□□ 0.41
VTI1B-205ENST00000555543 DHFR2Q86XF0 187 aa17.64■□□□□ 0.41
VTI1B-205ENST00000555543 AKR7LQ8NHP1 331 aa17.64■□□□□ 0.41
VTI1B-205ENST00000555543 C10orf105Q8TEF2 133 aa17.64■□□□□ 0.41
VTI1B-205ENST00000555543 FAM168AQ92567 244 aa17.64■□□□□ 0.41
VTI1B-205ENST00000555543 POM121Q96HA1 1249 aa17.64■□□□□ 0.41
VTI1B-205ENST00000555543 FOXN4Q96NZ1 517 aa17.64■□□□□ 0.41
VTI1B-205ENST00000555543 SYT3Q9BQG1 590 aa17.64■□□□□ 0.41
VTI1B-205ENST00000555543 C1orf21Q9H246 121 aa17.64■□□□□ 0.41
VTI1B-205ENST00000555543 KCNN2Q9H2S1 579 aa17.64■□□□□ 0.41
VTI1B-205ENST00000555543 OR51B6Q9H340 312 aa17.64■□□□□ 0.41
VTI1B-205ENST00000555543 C1orf198Q9H425 327 aa17.64■□□□□ 0.41
VTI1B-205ENST00000555543 CDH20Q9HBT6 801 aa17.64■□□□□ 0.41
VTI1B-205ENST00000555543 POLE4Q9NR33 117 aa17.64■□□□□ 0.41
VTI1B-205ENST00000555543 LYVE1Q9Y5Y7 322 aa17.64■□□□□ 0.41
VTI1B-205ENST00000555543 FKBP7Q9Y680 259 aa17.64■□□□□ 0.41
VTI1B-205ENST00000555543 RTTNQ86VV8 2226 aa17.64■□□□□ 0.41
VTI1B-205ENST00000555543 IQCMA0A1B0GVH7 501 aa17.63■□□□□ 0.41
VTI1B-205ENST00000555543 UBOX5O94941 541 aa17.63■□□□□ 0.41
VTI1B-205ENST00000555543 PPP1R3DO95685 299 aa17.63■□□□□ 0.41
VTI1B-205ENST00000555543 CST2P09228 141 aa17.63■□□□□ 0.41
VTI1B-205ENST00000555543 MSR1P21757 451 aa17.63■□□□□ 0.41
VTI1B-205ENST00000555543 GSSP48637 474 aa17.63■□□□□ 0.41
VTI1B-205ENST00000555543 ERVS71-1P61550 626 aa17.63■□□□□ 0.41
VTI1B-205ENST00000555543 RPS23P62266 143 aaKnown RBP17.63■□□□□ 0.41
VTI1B-205ENST00000555543 PSG4Q00888 419 aa17.63■□□□□ 0.41
VTI1B-205ENST00000555543 PLP2Q04941 152 aa17.63■□□□□ 0.41
VTI1B-205ENST00000555543 TBC1D28Q2M2D7 210 aa17.63■□□□□ 0.41
VTI1B-205ENST00000555543 GPR139Q6DWJ6 353 aa17.63■□□□□ 0.41
VTI1B-205ENST00000555543 PGBD2Q6P3X8 592 aa17.63■□□□□ 0.41
VTI1B-205ENST00000555543 UGT2A3Q6UWM9 527 aa17.63■□□□□ 0.41
VTI1B-205ENST00000555543 DPY19L2P2Q6ZN68 376 aa17.63■□□□□ 0.41
VTI1B-205ENST00000555543 ZNF416Q9BWM5 594 aa17.63■□□□□ 0.41
VTI1B-205ENST00000555543 OR2H1Q9GZK4 316 aa17.63■□□□□ 0.41
VTI1B-205ENST00000555543 WNT5BQ9H1J7 359 aa17.63■□□□□ 0.41
VTI1B-205ENST00000555543 SYT4Q9H2B2 425 aa17.63■□□□□ 0.41
VTI1B-205ENST00000555543 OR52D1Q9H346 318 aa17.63■□□□□ 0.41
VTI1B-205ENST00000555543 DYNLRB1Q9NP97 96 aa17.63■□□□□ 0.41
VTI1B-205ENST00000555543 EMC7Q9NPA0 242 aa17.63■□□□□ 0.41
VTI1B-205ENST00000555543 VSX1Q9NZR4 365 aaPredicted RBP17.63■□□□□ 0.41
VTI1B-205ENST00000555543 TMCC3Q9ULS5 477 aa17.63■□□□□ 0.41
VTI1B-205ENST00000555543 HIVEP2P31629 2446 aa17.63■□□□□ 0.41
VTI1B-205ENST00000555543 LOC100509620A0A075B734 347 aa17.62■□□□□ 0.41
VTI1B-205ENST00000555543 AHCYL1O43865 530 aa17.62■□□□□ 0.41
VTI1B-205ENST00000555543 TXNDC12O95881 172 aa17.62■□□□□ 0.41
VTI1B-205ENST00000555543 PTHP01270 115 aa17.62■□□□□ 0.41
VTI1B-205ENST00000555543 ADRA2AP08913 450 aa17.62■□□□□ 0.41
VTI1B-205ENST00000555543 APLNRP35414 380 aa17.62■□□□□ 0.41
VTI1B-205ENST00000555543 CDKN2AP42771 156 aaKnown RBP17.62■□□□□ 0.41
VTI1B-205ENST00000555543 OTPQ5XKR4 325 aa17.62■□□□□ 0.41
VTI1B-205ENST00000555543 C1orf94Q6P1W5 598 aa17.62■□□□□ 0.41
VTI1B-205ENST00000555543 OR9Q2Q8NGE9 314 aa17.62■□□□□ 0.41
VTI1B-205ENST00000555543 OR4C15Q8NGM1 316 aa17.62■□□□□ 0.41
VTI1B-205ENST00000555543 ASB9Q96DX5 294 aa17.62■□□□□ 0.41
VTI1B-205ENST00000555543 POM121L2Q96KW2 1035 aa17.62■□□□□ 0.41
VTI1B-205ENST00000555543 BTBD10Q9BSF8 475 aa17.62■□□□□ 0.41
VTI1B-205ENST00000555543 TPK1Q9H3S4 243 aa17.62■□□□□ 0.41
VTI1B-205ENST00000555543 MAGIXQ9H6Y5 334 aa17.62■□□□□ 0.41
VTI1B-205ENST00000555543 VNN3Q9NY84 501 aa17.62■□□□□ 0.41
VTI1B-205ENST00000555543 ACOT8O14734 319 aa17.61■□□□□ 0.41
VTI1B-205ENST00000555543 SYNGR3O43761 229 aa17.61■□□□□ 0.41
VTI1B-205ENST00000555543 SLC16A7O60669 478 aa17.61■□□□□ 0.41
VTI1B-205ENST00000555543 CSF3P09919 207 aa17.61■□□□□ 0.41
VTI1B-205ENST00000555543 STOMP27105 288 aa17.61■□□□□ 0.41
VTI1B-205ENST00000555543 WNT5AP41221 380 aa17.61■□□□□ 0.41
VTI1B-205ENST00000555543 EVX1P49640 407 aa17.61■□□□□ 0.41
VTI1B-205ENST00000555543 RPS6KA3P51812 740 aa17.61■□□□□ 0.41
VTI1B-205ENST00000555543 HMGA2P52926 109 aa17.61■□□□□ 0.41
VTI1B-205ENST00000555543 DBPQ10586 325 aaPredicted RBP17.61■□□□□ 0.41
VTI1B-205ENST00000555543 PPP1R8Q12972 351 aaKnown RBP17.61■□□□□ 0.41
VTI1B-205ENST00000555543 MAD2L1BPQ15013 274 aaPredicted RBP17.61■□□□□ 0.41
VTI1B-205ENST00000555543 RFX4Q33E94 735 aa17.61■□□□□ 0.41
VTI1B-205ENST00000555543 ZNF620Q6ZNG0 422 aa17.61■□□□□ 0.41
VTI1B-205ENST00000555543 ADCK1Q86TW2 530 aa17.61■□□□□ 0.41
VTI1B-205ENST00000555543 OR1J2Q8NGS2 313 aa17.61■□□□□ 0.41
VTI1B-205ENST00000555543 SAMD8Q96LT4 415 aa17.61■□□□□ 0.41
VTI1B-205ENST00000555543 ERMAPQ96PL5 475 aaPredicted RBP17.61■□□□□ 0.41
VTI1B-205ENST00000555543 THTPAQ9BU02 230 aa17.61■□□□□ 0.41
VTI1B-205ENST00000555543 RAB1BQ9H0U4 201 aa17.61■□□□□ 0.41
VTI1B-205ENST00000555543 FBXO9Q9UK97 447 aaPredicted RBP17.61■□□□□ 0.41
VTI1B-205ENST00000555543 TNFRSF11BO00300 401 aa17.6■□□□□ 0.41
VTI1B-205ENST00000555543 DCTN6O00399 190 aa17.6■□□□□ 0.41
VTI1B-205ENST00000555543 KRT36O76013 467 aa17.6■□□□□ 0.41
VTI1B-205ENST00000555543 APEHP13798 732 aaKnown RBP17.6■□□□□ 0.41
VTI1B-205ENST00000555543 SLC25A16P16260 332 aa17.6■□□□□ 0.41
VTI1B-205ENST00000555543 GUCA1AP43080 201 aaPredicted RBP17.6■□□□□ 0.41
VTI1B-205ENST00000555543 ALDH3B1P43353 468 aa17.6■□□□□ 0.41
VTI1B-205ENST00000555543 PDLIM4P50479 330 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms