RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 CAPSLQ8WWF8 208 aa3.6□□□□□ -1.83
VRK1-205ENST00000555402 FAM3DQ96BQ1 224 aa3.6□□□□□ -1.83
VRK1-205ENST00000555402 ASB9Q96DX5 294 aa3.6□□□□□ -1.83
VRK1-205ENST00000555402 TSSK3Q96PN8 268 aa3.6□□□□□ -1.83
VRK1-205ENST00000555402 CCNB1IP1Q9NPC3 277 aa3.6□□□□□ -1.83
VRK1-205ENST00000555402 COL4A4P53420 1690 aaPredicted RBP3.59□□□□□ -1.83
VRK1-205ENST00000555402 FAM166BA8MTA8 275 aa3.59□□□□□ -1.83
VRK1-205ENST00000555402 DPM1O60762 260 aa3.59□□□□□ -1.83
VRK1-205ENST00000555402 UTS2O95399 124 aa3.59□□□□□ -1.83
VRK1-205ENST00000555402 C6orf47O95873 294 aa3.59□□□□□ -1.83
VRK1-205ENST00000555402 BGLAPP02818 100 aa3.59□□□□□ -1.83
VRK1-205ENST00000555402 SMIM10L1P0DMW3 83 aa3.59□□□□□ -1.83
VRK1-205ENST00000555402 NR2C1P13056 603 aa3.59□□□□□ -1.83
VRK1-205ENST00000555402 ZNF30P17039 623 aa3.59□□□□□ -1.83
VRK1-205ENST00000555402 BCKDHBP21953 392 aa3.59□□□□□ -1.83
VRK1-205ENST00000555402 HRH1P35367 487 aa3.59□□□□□ -1.83
VRK1-205ENST00000555402 AQP2P41181 271 aa3.59□□□□□ -1.83
VRK1-205ENST00000555402 RAB9AP51151 201 aa3.59□□□□□ -1.83
VRK1-205ENST00000555402 NCBP2P52298 156 aaKnown RBP eCLIP3.59□□□□□ -1.83
VRK1-205ENST00000555402 ZNF133P52736 654 aaPredicted RBP3.59□□□□□ -1.83
VRK1-205ENST00000555402 STXBP1P61764 594 aaKnown RBP3.59□□□□□ -1.83
VRK1-205ENST00000555402 SPAG1Q07617 926 aa3.59□□□□□ -1.83
VRK1-205ENST00000555402 TCP10Q12799 353 aa3.59□□□□□ -1.83
VRK1-205ENST00000555402 WDR43Q15061 677 aaKnown RBP eCLIP3.59□□□□□ -1.83
VRK1-205ENST00000555402 TMEM183BQ1AE95 376 aa3.59□□□□□ -1.83
VRK1-205ENST00000555402 CYB5R2Q6BCY4 276 aa3.59□□□□□ -1.83
VRK1-205ENST00000555402 TTC23LQ6PF05 361 aa3.59□□□□□ -1.83
VRK1-205ENST00000555402 TMEM220Q6QAJ8 160 aa3.59□□□□□ -1.83
VRK1-205ENST00000555402 CMC1Q7Z7K0 106 aa3.59□□□□□ -1.83
VRK1-205ENST00000555402 MMAAQ8IVH4 418 aaKnown RBP3.59□□□□□ -1.83
VRK1-205ENST00000555402 TMEM183AQ8IXX5 376 aa3.59□□□□□ -1.83
VRK1-205ENST00000555402 Q8N7P7 452 aa3.59□□□□□ -1.83
VRK1-205ENST00000555402 PRELID2Q8N945 189 aa3.59□□□□□ -1.83
VRK1-205ENST00000555402 NRGNQ92686 78 aa3.59□□□□□ -1.83
VRK1-205ENST00000555402 RNF185Q96GF1 192 aa3.59□□□□□ -1.83
VRK1-205ENST00000555402 SMIM10Q96HG1 83 aa3.59□□□□□ -1.83
VRK1-205ENST00000555402 IQCGQ9H095 443 aaKnown RBP3.59□□□□□ -1.83
VRK1-205ENST00000555402 AUNIPQ9H7T9 357 aa3.59□□□□□ -1.83
VRK1-205ENST00000555402 STOX2Q9P2F5 926 aaPredicted RBP3.59□□□□□ -1.83
VRK1-205ENST00000555402 LGALS13Q9UHV8 139 aa3.59□□□□□ -1.83
VRK1-205ENST00000555402 F11RQ9Y624 299 aaKnown RBP3.59□□□□□ -1.83
VRK1-205ENST00000555402 CENPJQ9HC77 1338 aaPredicted RBP3.59□□□□□ -1.83
VRK1-205ENST00000555402 GTF3C1Q12789 2109 aa3.59□□□□□ -1.84
VRK1-205ENST00000555402 WI2-2373I1.2A0A1W2PRP0 233 aa3.58□□□□□ -1.84
VRK1-205ENST00000555402 PINLYPA6NC86 204 aa3.58□□□□□ -1.84
VRK1-205ENST00000555402 NKX2-6A6NCS4 301 aa3.58□□□□□ -1.84
VRK1-205ENST00000555402 PANO1I0J062 215 aa3.58□□□□□ -1.84
VRK1-205ENST00000555402 POLR3GO15318 223 aaPredicted RBP3.58□□□□□ -1.84
VRK1-205ENST00000555402 CHST1O43916 411 aa3.58□□□□□ -1.84
VRK1-205ENST00000555402 CA11O75493 328 aa3.58□□□□□ -1.84
VRK1-205ENST00000555402 CTAG2O75638 210 aa3.58□□□□□ -1.84
VRK1-205ENST00000555402 FGFR1OPO95684 399 aaKnown RBP3.58□□□□□ -1.84
VRK1-205ENST00000555402 STOMP27105 288 aa3.58□□□□□ -1.84
VRK1-205ENST00000555402 MAGEA1P43355 309 aa3.58□□□□□ -1.84
VRK1-205ENST00000555402 MRPL19P49406 292 aaKnown RBP3.58□□□□□ -1.84
VRK1-205ENST00000555402 LHX2P50458 406 aa3.58□□□□□ -1.84
VRK1-205ENST00000555402 TTLL9Q3SXZ7 439 aa3.58□□□□□ -1.84
VRK1-205ENST00000555402 PIGGQ5H8A4 983 aa3.58□□□□□ -1.84
VRK1-205ENST00000555402 STRADAQ7RTN6 431 aa3.58□□□□□ -1.84
VRK1-205ENST00000555402 MKXQ8IYA7 352 aa3.58□□□□□ -1.84
VRK1-205ENST00000555402 COMMD1Q8N668 190 aa3.58□□□□□ -1.84
VRK1-205ENST00000555402 ARIH2OSQ8N7S6 290 aa3.58□□□□□ -1.84
VRK1-205ENST00000555402 LYPD6BQ8NI32 183 aa3.58□□□□□ -1.84
VRK1-205ENST00000555402 SIKE1Q9BRV8 207 aa3.58□□□□□ -1.84
VRK1-205ENST00000555402 TEKT3Q9BXF9 490 aa3.58□□□□□ -1.84
VRK1-205ENST00000555402 CDC42EP4Q9H3Q1 356 aaKnown RBP3.58□□□□□ -1.84
VRK1-205ENST00000555402 MRPL22Q9NWU5 206 aaKnown RBP3.58□□□□□ -1.84
VRK1-205ENST00000555402 ANAPC11Q9NYG5 84 aa3.58□□□□□ -1.84
VRK1-205ENST00000555402 CCDC59Q9P031 241 aaKnown RBP3.58□□□□□ -1.84
VRK1-205ENST00000555402 NYAP2Q9P242 653 aa3.58□□□□□ -1.84
VRK1-205ENST00000555402 ZNF629Q9UEG4 869 aaPredicted RBP3.58□□□□□ -1.84
VRK1-205ENST00000555402 MRPS18BQ9Y676 258 aaKnown RBP3.58□□□□□ -1.84
VRK1-205ENST00000555402 PHLPP2Q6ZVD8 1323 aa3.58□□□□□ -1.84
VRK1-205ENST00000555402 TRBV6-6A0A0A6YYG2 114 aa3.57□□□□□ -1.84
VRK1-205ENST00000555402 TRBV9A0A0B4J1U6 114 aa3.57□□□□□ -1.84
VRK1-205ENST00000555402 SUPT3HB4E1H0 165 aa3.57□□□□□ -1.84
VRK1-205ENST00000555402 EIF4E2O60573 245 aaKnown RBP3.57□□□□□ -1.84
VRK1-205ENST00000555402 FLOT1O75955 427 aa3.57□□□□□ -1.84
VRK1-205ENST00000555402 SRP72O76094 671 aaKnown RBP3.57□□□□□ -1.84
VRK1-205ENST00000555402 CCNB2O95067 398 aa3.57□□□□□ -1.84
VRK1-205ENST00000555402 PCCAP05165 728 aaPredicted RBP3.57□□□□□ -1.84
VRK1-205ENST00000555402 INSRP06213 1382 aa3.57□□□□□ -1.84
VRK1-205ENST00000555402 PLEKP08567 350 aaPredicted RBP3.57□□□□□ -1.84
VRK1-205ENST00000555402 ZDHHC11BP0C7U3 371 aa3.57□□□□□ -1.84
VRK1-205ENST00000555402 RALBP11234 206 aa3.57□□□□□ -1.84
VRK1-205ENST00000555402 MGMTP16455 207 aa3.57□□□□□ -1.84
VRK1-205ENST00000555402 GSTM3P21266 225 aa3.57□□□□□ -1.84
VRK1-205ENST00000555402 CD9P21926 228 aa3.57□□□□□ -1.84
VRK1-205ENST00000555402 CXCL5P42830 114 aa3.57□□□□□ -1.84
VRK1-205ENST00000555402 NAMPTP43490 491 aa3.57□□□□□ -1.84
VRK1-205ENST00000555402 CCR6P51684 374 aa3.57□□□□□ -1.84
VRK1-205ENST00000555402 SLC7A9P82251 487 aa3.57□□□□□ -1.84
VRK1-205ENST00000555402 HMGCS1Q01581 520 aa3.57□□□□□ -1.84
VRK1-205ENST00000555402 SLC25A11Q02978 314 aaKnown RBP3.57□□□□□ -1.84
VRK1-205ENST00000555402 ANKRD22Q5VYY1 191 aa3.57□□□□□ -1.84
VRK1-205ENST00000555402 MAP3K15Q6ZN16 1313 aa3.57□□□□□ -1.84
VRK1-205ENST00000555402 ZNF493Q6ZR52 646 aa3.57□□□□□ -1.84
VRK1-205ENST00000555402 ABHD13Q7L211 337 aa3.57□□□□□ -1.84
VRK1-205ENST00000555402 AKNAQ7Z591 1439 aa3.57□□□□□ -1.84
VRK1-205ENST00000555402 KATNAL2Q8IYT4 538 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms