RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 CGAP01215 116 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 GABRA1P14867 456 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 CA7P43166 264 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 TUBA4AP68366 448 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 GLO1Q04760 184 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 CORO6Q6QEF8 472 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 PLEKHG7Q6ZR37 379 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 FAM214BQ7L5A3 538 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 HDDC2Q7Z4H3 204 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 LINC00346Q8IVM7 164 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 PRR7Q8TB68 274 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 C11orf40Q8WZ69 217 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 GMPPAQ96IJ6 420 aaPredicted RBP9.48□□□□□ -0.89
TDP1-211ENST00000555178 RBM24Q9BX46 236 aaKnown RBP9.48□□□□□ -0.89
TDP1-211ENST00000555178 CDCA4Q9BXL8 241 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 ISG20L2Q9H9L3 353 aaKnown RBP9.48□□□□□ -0.89
TDP1-211ENST00000555178 ERVK13-1Q9NX77 482 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 EMC3Q9P0I2 261 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 MOKQ9UQ07 419 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 MEMO1Q9Y316 297 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 GPR171O14626 319 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 LRRTM2O43300 516 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 AKAP8O43823 692 aaKnown RBP9.47□□□□□ -0.89
TDP1-211ENST00000555178 SPARCP09486 303 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 TMIGD3P0DMS9 266 aaPredicted RBP9.47□□□□□ -0.89
TDP1-211ENST00000555178 FCGR2AP12318 317 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 DCKP27707 260 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 GP2P55259 537 aaKnown RBP9.47□□□□□ -0.89
TDP1-211ENST00000555178 ADAM8P78325 824 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 ADORA2A-AS1P86434 159 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 TBCEQ15813 527 aaPredicted RBP9.47□□□□□ -0.89
TDP1-211ENST00000555178 GLB1L2Q8IW92 636 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 ACBD7Q8N6N7 88 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 ZNF610Q8N9Z0 462 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 INTS14Q96SY0 518 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 SLCO5A1Q9H2Y9 848 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 LSM2Q9Y333 95 aaKnown RBP9.47□□□□□ -0.89
TDP1-211ENST00000555178 HCFC1P51610 2035 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 DAPL1A0PJW8 107 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 DPPA5A6NC42 116 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 ZNF593O00488 134 aaPredicted RBP9.47□□□□□ -0.89
TDP1-211ENST00000555178 CCL21O00585 134 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 DHHO43323 396 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 LALBAP00709 142 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 MYL12AP19105 171 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 PER3P56645 1201 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 HSF2Q03933 536 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 RAB39AQ14964 217 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 MED22Q15528 200 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 CEACAM16Q2WEN9 425 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 C10orf128Q5T292 105 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 DNM1P34Q6PK57 102 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 TFAP2EQ6VUC0 442 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 SPATC1Q76KD6 591 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 CDC20BQ86Y33 519 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 GPR137CQ8N3F9 429 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 POMGNT2Q8NAT1 580 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 RELL2Q8NC24 303 aaPredicted RBP9.47□□□□□ -0.89
TDP1-211ENST00000555178 GATAD2BQ8WXI9 593 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 NABP1Q96AH0 204 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 APH1AQ96BI3 265 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 ALG8Q9BVK2 526 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 MARCH7Q9H992 704 aa9.47□□□□□ -0.89
TDP1-211ENST00000555178 PNMA8CA0A1B0GUJ8 204 aa9.46□□□□□ -0.89
TDP1-211ENST00000555178 MYL12BO14950 172 aa9.46□□□□□ -0.89
TDP1-211ENST00000555178 AHCYL1O43865 530 aa9.46□□□□□ -0.89
TDP1-211ENST00000555178 HSMCR30P0CW71 290 aa9.46□□□□□ -0.89
TDP1-211ENST00000555178 B4GALT1P15291 398 aa9.46□□□□□ -0.89
TDP1-211ENST00000555178 PSMB9P28065 219 aa9.46□□□□□ -0.89
TDP1-211ENST00000555178 LAP3P28838 519 aa9.46□□□□□ -0.89
TDP1-211ENST00000555178 TIMP3P35625 211 aa9.46□□□□□ -0.89
TDP1-211ENST00000555178 ALDH3B2P48448 385 aa9.46□□□□□ -0.89
TDP1-211ENST00000555178 ZNF133P52736 654 aaPredicted RBP9.46□□□□□ -0.89
TDP1-211ENST00000555178 ROR2Q01974 943 aaKnown RBP9.46□□□□□ -0.89
TDP1-211ENST00000555178 RBPJQ06330 500 aa9.46□□□□□ -0.89
TDP1-211ENST00000555178 POU4F2Q12837 409 aa9.46□□□□□ -0.89
TDP1-211ENST00000555178 FAPQ12884 760 aa9.46□□□□□ -0.89
TDP1-211ENST00000555178 TMED1Q13445 227 aa9.46□□□□□ -0.89
TDP1-211ENST00000555178 TP53I3Q53FA7 332 aa9.46□□□□□ -0.89
TDP1-211ENST00000555178 ZNF474Q6S9Z5 364 aaPredicted RBP9.46□□□□□ -0.89
TDP1-211ENST00000555178 SLC16A9Q7RTY1 509 aa9.46□□□□□ -0.89
TDP1-211ENST00000555178 UBE2J2Q8N2K1 259 aa9.46□□□□□ -0.89
TDP1-211ENST00000555178 LRRC18Q8N456 261 aa9.46□□□□□ -0.89
TDP1-211ENST00000555178 NANOGP1Q8N7R0 232 aa9.46□□□□□ -0.89
TDP1-211ENST00000555178 ZFP41Q8N8Y5 198 aa9.46□□□□□ -0.89
TDP1-211ENST00000555178 FGFBP3Q8TAT2 258 aa9.46□□□□□ -0.89
TDP1-211ENST00000555178 MUL1Q969V5 352 aa9.46□□□□□ -0.89
TDP1-211ENST00000555178 TM9SF2Q99805 663 aa9.46□□□□□ -0.89
TDP1-211ENST00000555178 GPR35Q9HC97 309 aa9.46□□□□□ -0.89
TDP1-211ENST00000555178 PCDHGB1Q9Y5G3 927 aa9.46□□□□□ -0.89
TDP1-211ENST00000555178 ZNF503-AS2A6NEH8 195 aa9.46□□□□□ -0.9
TDP1-211ENST00000555178 PATE4P0C8F1 98 aa9.46□□□□□ -0.9
TDP1-211ENST00000555178 RNF224P0DH78 156 aa9.46□□□□□ -0.9
TDP1-211ENST00000555178 BMP5P22003 454 aa9.46□□□□□ -0.9
TDP1-211ENST00000555178 RPL5P46777 297 aaKnown RBP9.46□□□□□ -0.9
TDP1-211ENST00000555178 OR3A2P47893 321 aa9.46□□□□□ -0.9
TDP1-211ENST00000555178 ENTPD1P49961 510 aa9.46□□□□□ -0.9
TDP1-211ENST00000555178 NR1H2P55055 460 aa9.46□□□□□ -0.9
TDP1-211ENST00000555178 OR12D2P58182 307 aa9.46□□□□□ -0.9
TDP1-211ENST00000555178 SGCAQ16586 387 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms