RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 SPIBQ01892 262 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 PLP2Q04941 152 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 LOXL1Q08397 574 aaPredicted RBP6.48□□□□□ -1.37
LINC00640-201ENST00000554409 MSMPQ1L6U9 139 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 MESTQ5EB52 335 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 GPR139Q6DWJ6 353 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 LCN8Q6JVE9 175 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 DPY19L2P2Q6ZN68 376 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 Q71RC1 249 aaPredicted RBP6.48□□□□□ -1.37
LINC00640-201ENST00000554409 SVOPLQ8N434 492 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 LRRC18Q8N456 261 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 CLDN22Q8N7P3 220 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 OR1J2Q8NGS2 313 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 NEU4Q8WWR8 484 aaPredicted RBP6.48□□□□□ -1.37
LINC00640-201ENST00000554409 FAM168AQ92567 244 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 POP5Q969H6 163 aaKnown RBP6.48□□□□□ -1.37
LINC00640-201ENST00000554409 MCUR1Q96AQ8 359 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 NSL1Q96IY1 281 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 RSRC1Q96IZ7 334 aaKnown RBP6.48□□□□□ -1.37
LINC00640-201ENST00000554409 ZNF570Q96NI8 536 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 WACQ9BTA9 647 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 MRPL37Q9BZE1 423 aaKnown RBP6.48□□□□□ -1.37
LINC00640-201ENST00000554409 RAB1BQ9H0U4 201 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 C1orf21Q9H246 121 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 RNF121Q9H920 327 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 CCNB1IP1Q9NPC3 277 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 IL1RAPQ9NPH3 570 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 NRIP3Q9NQ35 241 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 GRHPRQ9UBQ7 328 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 AURKCQ9UQB9 309 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 ADAM18Q9Y3Q7 739 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 V9GYQ6 96 aa6.48□□□□□ -1.37
LINC00640-201ENST00000554409 IGLV3-9A0A075B6K5 115 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 TEX13CA0A0J9YWL9 993 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 LOC390937A0A1W2PQ73 354 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 TCRBV5S2A0A599 114 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 PRSS37A4D1T9 235 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 UNC119BA6NIH7 251 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 M0R233 179 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 XKRYO14609 159 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 SYNGR3O43761 229 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 CD5LO43866 347 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 ICMTO60725 284 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 LY6HO94772 140 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 TXNDC12O95881 172 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 ERCC1P07992 297 aaPredicted RBP6.47□□□□□ -1.37
LINC00640-201ENST00000554409 IGFBP1P08833 259 aaPredicted RBP6.47□□□□□ -1.37
LINC00640-201ENST00000554409 T-ENOLP0DO92 83 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 APEHP13798 732 aaKnown RBP6.47□□□□□ -1.37
LINC00640-201ENST00000554409 ZNF250P15622 560 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 ZNF32P17041 273 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 ATP6V1B2P21281 511 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 MSR1P21757 451 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 FPR3P25089 353 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 STOMP27105 288 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 RRM2P31350 389 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 APLNRP35414 380 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 GUCA1AP43080 201 aaPredicted RBP6.47□□□□□ -1.37
LINC00640-201ENST00000554409 RAD52P43351 418 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 MAGEA2P43356 314 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 RPS6KA3P51812 740 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 HMGA2P52926 109 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 PCBD1P61457 104 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 HSF2Q03933 536 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 KRR1Q13601 381 aaKnown RBP6.47□□□□□ -1.37
LINC00640-201ENST00000554409 SGCAQ16586 387 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 TBC1D28Q2M2D7 210 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 PABPC1L2AQ5JQF8 200 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 C1orf94Q6P1W5 598 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 SMARCD3Q6STE5 483 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 LYPD4Q6UWN0 246 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 ZER1Q7Z7L7 766 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 SYT9Q86SS6 491 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 ADCK1Q86TW2 530 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 ZDHHC21Q8IVQ6 265 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 PAQR4Q8N4S7 273 aaPredicted RBP6.47□□□□□ -1.37
LINC00640-201ENST00000554409 CPEB3Q8NE35 698 aaKnown RBP6.47□□□□□ -1.37
LINC00640-201ENST00000554409 OR52J3Q8NH60 311 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 NSMAFQ92636 917 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 Q96M85 177 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 GPA33Q99795 319 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 VRK1Q99986 396 aaPredicted RBP6.47□□□□□ -1.37
LINC00640-201ENST00000554409 PIMREGQ9BSJ6 248 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 BCL2L14Q9BZR8 327 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 LRMDAQ9H2I8 198 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 MAGIXQ9H6Y5 334 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 CDH20Q9HBT6 801 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 DYNLRB1Q9NP97 96 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 VSX1Q9NZR4 365 aaPredicted RBP6.47□□□□□ -1.37
LINC00640-201ENST00000554409 ADAM21Q9UKJ8 722 aa6.47□□□□□ -1.37
LINC00640-201ENST00000554409 PRPF19Q9UMS4 504 aaKnown RBP6.47□□□□□ -1.37
LINC00640-201ENST00000554409 NSD1Q96L73 2696 aaPredicted RBP6.47□□□□□ -1.37
LINC00640-201ENST00000554409 NF1P21359 2839 aa6.46□□□□□ -1.37
LINC00640-201ENST00000554409 A0A1W2PPL8 197 aa6.46□□□□□ -1.38
LINC00640-201ENST00000554409 H7C1C5 153 aa6.46□□□□□ -1.38
LINC00640-201ENST00000554409 IMPA2O14732 288 aa6.46□□□□□ -1.38
LINC00640-201ENST00000554409 ARPC3O15145 178 aa6.46□□□□□ -1.38
LINC00640-201ENST00000554409 TLX2O43763 284 aaPredicted RBP6.46□□□□□ -1.38
LINC00640-201ENST00000554409 OR10H3O60404 316 aa6.46□□□□□ -1.38
LINC00640-201ENST00000554409 KRT36O76013 467 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms