RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 K7EQG2 157 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 SULT1C2O00338 296 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 PRMT5O14744 637 aaPredicted RBP1.76□□□□□ -2.13
SRP54-204ENST00000553923 MGRN1O60291 552 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 FKBP6O75344 327 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 PSIP1O75475 530 aaKnown RBP1.76□□□□□ -2.13
SRP54-204ENST00000553923 ATP5HO75947 161 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 SLC2A10O95528 541 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 LDOC1O95751 146 aaPredicted RBP1.76□□□□□ -2.13
SRP54-204ENST00000553923 CST4P01036 141 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 KLK1P06870 262 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 OR8U8P0C7N1 319 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 OCMP0CE72 109 aaPredicted RBP1.76□□□□□ -2.13
SRP54-204ENST00000553923 CTRB1P17538 263 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 TCP1P17987 556 aaKnown RBP1.76□□□□□ -2.13
SRP54-204ENST00000553923 CSNK2A2P19784 350 aaPredicted RBP1.76□□□□□ -2.13
SRP54-204ENST00000553923 TCN1P20061 433 aaPredicted RBP1.76□□□□□ -2.13
SRP54-204ENST00000553923 ZBTB25P24278 435 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 AQP2P41181 271 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 CSKP41240 450 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 TNFSF9P41273 254 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 YAP1P46937 504 aaKnown RBP1.76□□□□□ -2.13
SRP54-204ENST00000553923 OR1D4P47884 311 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 ALDH3B2P48448 385 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 KCNJ3P48549 501 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 CDC34P49427 236 aaPredicted RBP1.76□□□□□ -2.13
SRP54-204ENST00000553923 SERPINB8P50452 374 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 RORCP51449 518 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 SSR4P51571 173 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 EFNA3P52797 238 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 SUB1P53999 127 aaKnown RBP eCLIP1.76□□□□□ -2.13
SRP54-204ENST00000553923 UCNP55089 124 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 UBE2IP63279 158 aaKnown RBP1.76□□□□□ -2.13
SRP54-204ENST00000553923 ADARB1P78563 741 aaKnown RBP1.76□□□□□ -2.13
SRP54-204ENST00000553923 BASP1P80723 227 aaKnown RBP1.76□□□□□ -2.13
SRP54-204ENST00000553923 ACVR1Q04771 509 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 TWF1Q12792 350 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 MADCAM1Q13477 382 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 DPYSL3Q14195 570 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 GGTLC2Q14390 218 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 CAPRIN1Q14444 709 aaKnown RBP1.76□□□□□ -2.13
SRP54-204ENST00000553923 PON2Q15165 354 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 PSG3Q16557 428 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 ATP6V1FQ16864 119 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 MICAQ29983 383 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 RPEL1Q2QD12 228 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 PARP15Q460N3 678 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 ZBED5Q49AG3 693 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 KHDRBS2Q5VWX1 349 aaKnown RBP1.76□□□□□ -2.13
SRP54-204ENST00000553923 DUPD1Q68J44 220 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 CTRB2Q6GPI1 263 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 EMBQ6PCB8 327 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 TFAP2EQ6VUC0 442 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 CERS6Q6ZMG9 384 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 TMPRSS11AQ6ZMR5 421 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 SLC25A48Q6ZT89 311 aaKnown RBP1.76□□□□□ -2.13
SRP54-204ENST00000553923 SLC35D2Q76EJ3 337 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 SSX6Q7RTT6 188 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 OR2W3Q7Z3T1 314 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 ABHD12BQ7Z5M8 362 aaPredicted RBP1.76□□□□□ -2.13
SRP54-204ENST00000553923 LHFPL3Q86UP9 236 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 CRLF3Q8IUI8 442 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 LRRC49Q8IUZ0 686 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 VKORC1L1Q8N0U8 176 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 ATP6V1C2Q8NEY4 427 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 NOXO1Q8NFA2 376 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 BEST4Q8NFU0 473 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 OR6N2Q8NGY6 317 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 OR51F2Q8NH61 342 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 FANK1Q8TC84 345 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 SSC4DQ8WTU2 575 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 IFT81Q8WYA0 676 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 IL22RA2Q969J5 263 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 PPP1R14BQ96C90 147 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 CENPNQ96H22 339 aaPredicted RBP1.76□□□□□ -2.13
SRP54-204ENST00000553923 SLC45A3Q96JT2 553 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 ZNF597Q96LX8 424 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 SERPINB11Q96P15 392 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 KCNA7Q96RP8 456 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 MCCC1Q96RQ3 725 aaPredicted RBP1.76□□□□□ -2.13
SRP54-204ENST00000553923 MCHR1Q99705 422 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 FOXC2Q99958 501 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 SH3GL1Q99961 368 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 MICU1Q9BPX6 476 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 KLHDC3Q9BQ90 382 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 APOL2Q9BQE5 337 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 ELOVL4Q9GZR5 314 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 SRRQ9GZT4 340 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 DEFB129Q9H1M3 183 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 SAV1Q9H4B6 383 aaPredicted RBP1.76□□□□□ -2.13
SRP54-204ENST00000553923 ARMC7Q9H6L4 198 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 WDR55Q9H6Y2 383 aaPredicted RBP1.76□□□□□ -2.13
SRP54-204ENST00000553923 PSTPIP2Q9H939 334 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 ISG20L2Q9H9L3 353 aaKnown RBP1.76□□□□□ -2.13
SRP54-204ENST00000553923 FOLH1BQ9HBA9 442 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 PATZ1Q9HBE1 687 aaKnown RBP1.76□□□□□ -2.13
SRP54-204ENST00000553923 MIEF1Q9NQG6 463 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 CTPS2Q9NRF8 586 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 B3GNT2Q9NY97 397 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 RBAKQ9NYW8 714 aaPredicted RBP1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms