RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 SIRT7Q9NRC8 400 aa3.06□□□□□ -1.92
TDP1-207ENST00000553617 NECAP2Q9NVZ3 263 aa3.06□□□□□ -1.92
TDP1-207ENST00000553617 GID8Q9NWU2 228 aa3.06□□□□□ -1.92
TDP1-207ENST00000553617 CLN8Q9UBY8 286 aa3.06□□□□□ -1.92
TDP1-207ENST00000553617 NXT1Q9UKK6 140 aaKnown RBP3.06□□□□□ -1.92
TDP1-207ENST00000553617 AK6Q9Y3D8 172 aaKnown RBP3.06□□□□□ -1.92
TDP1-207ENST00000553617 POLR3HQ9Y535 204 aaPredicted RBP3.06□□□□□ -1.92
TDP1-207ENST00000553617 SNED1Q8TER0 1413 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 MTUS2Q5JR59 1369 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 MAP3K5Q99683 1374 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 RPAP1Q9BWH6 1393 aaPredicted RBP3.05□□□□□ -1.92
TDP1-207ENST00000553617 IGHV2-70DA0A0C4DH43 119 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 A0A1B0GTH9 108 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 A0A1W2PPE3 182 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 MIF4GDA9UHW6 222 aaKnown RBP3.05□□□□□ -1.92
TDP1-207ENST00000553617 ZNF487B1APH4 448 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 M0QXV9 152 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 PI15O43692 258 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 AIREO43918 545 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 NOS1APO75052 506 aaPredicted RBP3.05□□□□□ -1.92
TDP1-207ENST00000553617 LRATO95237 230 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 PSMG1O95456 288 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 CRYZL1O95825 349 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 IFNA5P01569 189 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 SERPINB2P05120 415 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 SERPINA5P05154 406 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 H2AFZP0C0S5 128 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 OCM2P0CE71 109 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 HSPD1P10809 573 aaKnown RBP3.05□□□□□ -1.92
TDP1-207ENST00000553617 IMPDH1P20839 514 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 BGNP21810 368 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 CXCR2P25025 360 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 MAGEA3P43357 314 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 MAGEA6P43360 314 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 CDK9P50750 372 aaKnown RBP3.05□□□□□ -1.92
TDP1-207ENST00000553617 NKX2-5P52952 324 aaPredicted RBP3.05□□□□□ -1.92
TDP1-207ENST00000553617 HMGCS2P54868 508 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 PSME3P61289 254 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 VLDLRP98155 873 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 PAX8Q06710 450 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 PUDPQ08623 228 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 FCHO2Q0JRZ9 810 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 STX4Q12846 297 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 KLRB1Q12918 225 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 BNIP2Q12982 314 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 ABRAXAS2Q15018 415 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 SLC9A3R2Q15599 337 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 ZNHIT3Q15649 155 aaPredicted RBP3.05□□□□□ -1.92
TDP1-207ENST00000553617 LTB4RQ15722 352 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 TNXAQ16473 311 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 KCTD19Q17RG1 926 aaPredicted RBP3.05□□□□□ -1.92
TDP1-207ENST00000553617 PAN3Q58A45 887 aaKnown RBP3.05□□□□□ -1.92
TDP1-207ENST00000553617 NHLRC3Q5JS37 347 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 TEX30Q5JUR7 227 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 C1orf220Q5T0J3 134 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 C1orf146Q5VVC0 180 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 MEDAGQ5VYS4 303 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 REEP3Q6NUK4 255 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 FAM199XQ6PEV8 388 aaPredicted RBP3.05□□□□□ -1.92
TDP1-207ENST00000553617 LRRN1Q6UXK5 716 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 BHLHA9Q7RTU4 235 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 SETD3Q86TU7 594 aaPredicted RBP3.05□□□□□ -1.92
TDP1-207ENST00000553617 ZNF329Q86UD4 541 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 PDIK1LQ8N165 341 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 FGFRL1Q8N441 504 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 TMEM156Q8N614 296 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 KIR3DL3Q8N743 410 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 Q8N9G6 341 aaPredicted RBP3.05□□□□□ -1.92
TDP1-207ENST00000553617 WDSUB1Q8N9V3 476 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 CCDC71LQ8N9Z2 235 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 INO80EQ8NBZ0 244 aaPredicted RBP3.05□□□□□ -1.92
TDP1-207ENST00000553617 OR4D9Q8NGE8 314 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 MRAPQ8TCY5 172 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 MCOLN3Q8TDD5 553 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 TCP10LQ8TDR4 215 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 FAM222BQ8WU58 562 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 PHF10Q8WUB8 498 aaKnown RBP3.05□□□□□ -1.92
TDP1-207ENST00000553617 C22orf15Q8WYQ4 148 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 S100PBPQ96BU1 408 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 RNF170Q96K19 258 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 WFIKKN1Q96NZ8 548 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 SLC38A2Q96QD8 506 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 MCCC1Q96RQ3 725 aaPredicted RBP3.05□□□□□ -1.92
TDP1-207ENST00000553617 EBNA1BP2Q99848 306 aaKnown RBP3.05□□□□□ -1.92
TDP1-207ENST00000553617 ZNF670Q9BS34 389 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 TIMM29Q9BSF4 260 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 ZNF426Q9BUY5 554 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 BCL2L14Q9BZR8 327 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 ABCB9Q9NP78 766 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 ZDHHC4Q9NPG8 344 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 INIPQ9NRY2 104 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 ARMC1Q9NVT9 282 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 ZNF282Q9UDV7 671 aaPredicted RBP3.05□□□□□ -1.92
TDP1-207ENST00000553617 FBXL3Q9UKT7 428 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 TMCO1Q9UM00 188 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 PRPF19Q9UMS4 504 aaKnown RBP3.05□□□□□ -1.92
TDP1-207ENST00000553617 SAMD4AQ9UPU9 718 aaKnown RBP3.05□□□□□ -1.92
TDP1-207ENST00000553617 MMACHCQ9Y4U1 282 aa3.05□□□□□ -1.92
TDP1-207ENST00000553617 MRPS18BQ9Y676 258 aaKnown RBP3.05□□□□□ -1.92
TDP1-207ENST00000553617 RLFQ13129 1914 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms